For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
IGGGDSMRTRCRAGRSTGESAVAGGSEVVAGTVVDPARDERRAVRVGVVFGLMALAAVVVIAGWLKFQVH AADEELQQRAQLLAAGRDGAVLLTTINHSDAEAKVEQILESATGVFLEDFRSRSQSFLATVRRAQSDTAG TVVEAGLESSHGDQANVLVVMSVKTSLAGTAAPPRLWRMRIGVQQVGQSTKVSDVEFLP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0919 | - | - | 100% (200) | hypothetical protein Mvan_0919 |
| M. vanbaalenii PYR-1 | Mvan_4598 | - | 4e-36 | 41.27% (189) | hypothetical protein Mvan_4598 |
| M. vanbaalenii PYR-1 | Mvan_0519 | - | 2e-34 | 42.19% (192) | hypothetical protein Mvan_0519 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1398c | - | 1e-19 | 32.74% (168) | hypothetical protein Mb1398c |
| M. gilvum PYR-GCK | Mflv_2107 | - | 9e-36 | 43.20% (169) | hypothetical protein Mflv_2107 |
| M. tuberculosis H37Rv | Rv1972 | - | 1e-33 | 46.20% (171) | mce associated membrane protein |
| M. leprae Br4923 | MLBr_02597 | - | 7e-06 | 25.78% (128) | hypothetical protein MLBr_02597 |
| M. abscessus ATCC 19977 | MAB_1004c | - | 2e-06 | 27.33% (161) | hypothetical protein MAB_1004c |
| M. marinum M | MMAR_4057 | - | 1e-33 | 45.86% (157) | Mce associated membrane protein |
| M. avium 104 | MAV_2538 | - | 1e-36 | 46.06% (165) | hypothetical protein MAV_2538 |
| M. smegmatis MC2 155 | MSMEG_0352 | - | 9e-32 | 42.42% (165) | hypothetical protein MSMEG_0352 |
| M. thermoresistible (build 8) | TH_0481 | - | 5e-34 | 43.78% (185) | PROBABLE CONSERVED MCE ASSOCIATED MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_3924 | - | 1e-33 | 46.54% (159) | Mce associated membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_0919|M.vanbaalenii_PYR-1 ---------------------------MIGGGDSMRTRCRAGRST-----
Rv1972|M.tuberculosis_H37Rv -------------------------------------MSVAVDSD-----
MMAR_4057|M.marinum_M --------MSDSTTLEEQPEPAEVVEPEGESGQAGVPEAQPRDEDQDETA
MUL_3924|M.ulcerans_Agy99 --------MSDSTTLEEQPEPAEVVEPEGESGQAGVPEAQPRDEDQDETA
MAV_2538|M.avium_104 --------------------------------------MEARDDE-----
Mflv_2107|M.gilvum_PYR-GCK --------MADDAAAPEG-------ELTDAQEREASTAAEPTDTDIDTED
TH_0481|M.thermoresistible__bu --------MVDG----------------NVAGAEDVAEAEDVAEA-----
MSMEG_0352|M.smegmatis_MC2_155 -----------------------------MAVDVDTARHELTQPGQ----
Mb1398c|M.bovis_AF2122/97 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREA
MAB_1004c|M.abscessus_ATCC_199 ----------MVTMTKEDVDSTNDADTDTADDKETVDSAAETDSEI----
MLBr_02597|M.leprae_Br4923 -----------------------------------MSPRRKFQAG-----
Mvan_0919|M.vanbaalenii_PYR-1 -------GESAVAG--------GSEVVAGTVVDPARDERR----------
Rv1972|M.tuberculosis_H37Rv -------AEDDAVS--------EIAEAAGVSPAPAKPSMS----------
MMAR_4057|M.marinum_M DETQDETQEDADADPEAGEDDAQASDGEQ--ESP-KPAPS----------
MUL_3924|M.ulcerans_Agy99 DET----QEDADADPEAGEDDAQASDGEQ--ESP-KPAPS----------
MAV_2538|M.avium_104 -------VEDYDAS----VDDAAEPDAED--PAPAKKLRS----------
Mflv_2107|M.gilvum_PYR-GCK -------TEDADAP-EAVEDDSVDADVDETDATPATGAMS----------
TH_0481|M.thermoresistible__bu --------EDVAEA----EDVAGAEDVAG-SASPSDDRRSF---------
MSMEG_0352|M.smegmatis_MC2_155 -------ADDQETD--------EKSGVDTDSREPTSAQVR----------
Mb1398c|M.bovis_AF2122/97 LAMAPAEDENVPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVR
MAB_1004c|M.abscessus_ATCC_199 -------AEDAASTDTDAASSADSDSETASSDEDGDAAKG----------
MLBr_02597|M.leprae_Br4923 -----------------------EGLLLVSHTVASQRRWG----------
Mvan_0919|M.vanbaalenii_PYR-1 AVRVGVVFGLMALAAVVV---IAGWLKFQVHAADEELQQRAQLLAAGRDG
Rv1972|M.tuberculosis_H37Rv APRRMLLFGLVVVVALAV---LLCCWGFRVQRARHAQDQRGHFLQAARQC
MMAR_4057|M.marinum_M KVRLAIVVGLAAVVAMAA---LASWFGFHAYQSHQADQQRKLYVQVARQG
MUL_3924|M.ulcerans_Agy99 KVRLAIVVGLAAVVAMAA---LASWFGFHAYQSHQADQQRKLYVQVARQG
MAV_2538|M.avium_104 PALLATVFGLVTVVGLAA---LGGWFGYQTYQSHQAQQQRELMVRIGRQG
Mflv_2107|M.gilvum_PYR-GCK HIKLALIAGLVGVLALAG---LAGWLGYQTYESHQAEEQRNLFVQVGRQG
TH_0481|M.thermoresistible__bu PAGWVLLAGGLGVLALCLT--LVGWLGYRAYDSRVDEAQRQLFLQVGRQA
MSMEG_0352|M.smegmatis_MC2_155 GVRGALVIGVLLLAIVGG---ATGWLVWQTQRAEQDQRMNEMLLQAGREA
Mb1398c|M.bovis_AF2122/97 LPRLSTIAMAAAVVIICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQG
MAB_1004c|M.abscessus_ATCC_199 ASWVRYAALGAVAAIMVGALVFSGIFGWKVWQQHQIDAAGEQALAVAIPY
MLBr_02597|M.leprae_Br4923 LPLAATFAALVMVAAITA----STLMSISHASRELAVAKDQQVLSYVKWF
:
Mvan_0919|M.vanbaalenii_PYR-1 AVLLTTINHSDAEAKVEQILESATGVFLEDFRSRSQSFLATVRRAQSDTA
Rv1972|M.tuberculosis_H37Rv ALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKASTV
MMAR_4057|M.marinum_M AINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIQVVQHFQSKSV
MUL_3924|M.ulcerans_Agy99 AINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIKVVQHFQSKSV
MAV_2538|M.avium_104 ALNLTTIDWQHADADVQRILDSATGTFYDDFSHRSKPFIDVVKKAQSKSV
Mflv_2107|M.gilvum_PYR-GCK ALNLTTINWESAEADVQRILDSATGTFYDDFQQRAEPFVQVVKQAQSKSE
TH_0481|M.thermoresistible__bu AINLTTIDHTRAEADVQRIIDGSTGGFREDFESRSAPFIEVVRQAESKSE
MSMEG_0352|M.smegmatis_MC2_155 AVNLTTMDFEHIREDIQRVLDGSTGTFYDEFEQRAPAFEEVVTKTQSKTE
Mb1398c|M.bovis_AF2122/97 VINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVTE
MAB_1004c|M.abscessus_ATCC_199 TETLTSIDSNDIDESFRKILNGATGDLKKDFTPASVQLRQLLLDNKAASH
MLBr_02597|M.leprae_Br4923 MTQFTTLDPYHANDYVARILAQATGDFAKQYNEKVNEILLQVAQAEPAT-
:.::: . ::: :** : .:: : : : :
Mvan_0919|M.vanbaalenii_PYR-1 GTVVEAGLESSHGD-QANVLVVMSVKTSLAGTAAP-PRLWRMRIGVQQVG
Rv1972|M.tuberculosis_H37Rv GTITEAGLQTQTAD-TAQALVAVSVQTSNAGEADPVPRAWRMRITVQRVG
MMAR_4057|M.marinum_M GTITAAALESESDD-AAQVLVAVSVKTTTAGAPEQRPRAWRMRITVQQVG
MUL_3924|M.ulcerans_Agy99 GTITAAALESESDD-AAQVLVAVSVKTTTAAAPEQRPRAWRMRITVQQVG
MAV_2538|M.avium_104 GTITEAGLESQSGS-EAQVLVAVSVKTSNLGAAEQDPRHWRMRVIVQKVG
Mflv_2107|M.gilvum_PYR-GCK GTIAEAGLESATDS-EGQVLVAVTVRTTNAGTPEQQPRAWRMRISVQEID
TH_0481|M.thermoresistible__bu GTVTEAGLESMDDD-EGQVLVAVSVRTTTPADPEPQPRSWRMRITVQKDH
MSMEG_0352|M.smegmatis_MC2_155 GTVTEAGIESVSAD-SARVLVAVSVKTSNIAAPEQRPRLWRMRIDVQRVG
Mb1398c|M.bovis_AF2122/97 GTVNATAVESMNEH-SAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEEG
MAB_1004c|M.abscessus_ATCC_199 GKVVNSAIQYKSTN-KVVLLMMVDQSITNTQRPDPRVDKSRMKITMEKID
MLBr_02597|M.leprae_Br4923 GTVLDAGVERWNDDGSANVLVATEVTSKSPDEKQVLENTNRWTATATREG
*.: :.:: *: . * .
Mvan_0919|M.vanbaalenii_PYR-1 QSTKVSDVEFLP
Rv1972|M.tuberculosis_H37Rv DRVKVSDVGFVP
MMAR_4057|M.marinum_M DEAKVANVEFVP
MUL_3924|M.ulcerans_Agy99 DEAKVANVEFVP
MAV_2538|M.avium_104 NDMKVSNVAFVP
Mflv_2107|M.gilvum_PYR-GCK GDAKVSNVEFVP
TH_0481|M.thermoresistible__bu DEAKVSNVEFVP
MSMEG_0352|M.smegmatis_MC2_155 DVAKVTNVGFVA
Mb1398c|M.bovis_AF2122/97 GQYKMSKVEFVP
MAB_1004c|M.abscessus_ATCC_199 GRWLASKLEYL-
MLBr_02597|M.leprae_Br4923 NQWKISNLLQVI
:.: :