For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTPEWSRLSPRMLLVHPVHEVVRQIPVLVGSLVLGSATGNPLWAVAGVALVIAYGLARWFTTTYRIGADD VQLRTGVLQRNVLSVPRNRIRSVSTDARLLHRLLGLTVVRVSTGQEATGDTSFELDAVPVAEVARLRAIL LAESLVPAGSAEPTRVLARWQPSWLRYSPLTFTGLLMIAAALGLLSHPGVFGALRDSGLVRKGERAAESL GVLGAVTVVVAVVLTASVALSVLQSLLSYGNLVLRRDAEVLHLSHGLLRVREHTFDMRRLRGGTLREPLL VRLFGGARLDAVMTGVAGAGEASQLLPPCPRGTAEAVLADLIDRPDAVTGPLTAHGPVATRRRWTRAMLA PAAVVVGLAVVSVVTDVPGSAWLVPAVLTVGCGFLAFDRARSLGHRVGGGWLVARAGSLQRRRDCVAAAG IVGWTVRQSLPQRRAGVATLVAATAAGVKRYEVIDVPADLAWSIAAATSPWVGATAWARR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0755 | - | - | 100% (480) | membrane-flanked domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1258c | - | 1e-175 | 65.07% (481) | hypothetical protein Mb1258c |
M. gilvum PYR-GCK | Mflv_0149 | - | 0.0 | 76.60% (483) | membrane-flanked domain-containing protein |
M. tuberculosis H37Rv | Rv1226c | - | 1e-174 | 64.86% (481) | hypothetical protein Rv1226c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1270 | - | 3e-24 | 26.99% (452) | hypothetical protein MAB_1270 |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0865 | - | 0.0 | 67.62% (488) | membrane flanked domain-containing protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mb1258c|M.bovis_AF2122/97 MTDRP------HDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNP Rv1226c|M.tuberculosis_H37Rv MTDRP------HDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNP Mvan_0755|M.vanbaalenii_PYR-1 MTP---------EWSRLSPRMLLVHPVHEVVRQIPVLVGSLVLGSATGNP Mflv_0149|M.gilvum_PYR-GCK MTPQA-------DWLRLSPRMLVVHPVHEVVRQIPVLIGSLVVGSATGNP MSMEG_0865|M.smegmatis_MC2_155 MTAPPQPPGAGPQWQRLSPRMLLVHPVHEVLQQIPLLVGSVVLGSATGNP MAB_1270|M.abscessus_ATCC_1997 ------------MTLRRSARWILREFIETLKIGWAGLALVLVN---ESFL * *.* :: . :. : . * :* . Mb1258c|M.bovis_AF2122/97 VWPLAALGVTVVFGVLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIR Rv1226c|M.tuberculosis_H37Rv VWPLAALGVTVVFGVLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIR Mvan_0755|M.vanbaalenii_PYR-1 LWAVAGVALVIAYGLARWFTTTYRIGADDVQLRTGVLQRNVLSVPRNRIR Mflv_0149|M.gilvum_PYR-GCK LWAVVGVVLIVGYGLARWFTTTYRIGADEVQLRTGVLQRTVLSVPRNRIR MSMEG_0865|M.smegmatis_MC2_155 LWTVAAIVLTILFGLARWFTTTYRIEPNEVQLRTGVLQRKVLAVPRNRIR MAB_1270|M.abscessus_ATCC_1997 LLFLAYLVLVVLLKTWAWRRTTIQVGGDAVVLEVRGVTTRRESVARSAVE : :. : : : * ** :: : * *.. : :*.*. :. Mb1258c|M.bovis_AF2122/97 SVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDSARVPRLRALLL Rv1226c|M.tuberculosis_H37Rv SVQTEARLLHRLLGLTVLRVGTGQEARGEAAFELDAVDSARVPRLRALLL Mvan_0755|M.vanbaalenii_PYR-1 SVSTDARLLHRLLGLTVVRVSTGQEATGDTSFELDAVPVAEVARLRAILL Mflv_0149|M.gilvum_PYR-GCK SVSTDARLLHRLLGLTVLKVSTGQEATGDGVFELDAVPAAEVGRLRAVLL MSMEG_0865|M.smegmatis_MC2_155 SVSTDARLLHRVMGLTVLRISTGQEAKGDAEFALDAVEAGQVPRLRAILL MAB_1270|M.abscessus_ATCC_1997 TLVVSAEMLDRLCGLQTLQLTTNDDSN---NLVLDGLSPQSVRDIGASLE :: ..*.:*.*: ** .::: *.::: : **.: * : * * Mb1258c|M.bovis_AF2122/97 AESLAP----VEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVIGLGYQTG Rv1226c|M.tuberculosis_H37Rv AESLAP----VEPTGRVLARWQSSWLRYAPLSFSGLVMIGAVIGLGYQTG Mvan_0755|M.vanbaalenii_PYR-1 AESLVP-AGSAEP-TRVLARWQPSWLRYSPLTFTGLLMIAAALGLLSHPG Mflv_0149|M.gilvum_PYR-GCK AESLAA-PDVARAGGRELARWQPSWLRYSPLTFTGLITIVAALGVISQTG MSMEG_0865|M.smegmatis_MC2_155 ADLADASPEEHVPAGRELARWQPAWLRYSPLSFTGLAMILAAFGIVYQAG MAB_1270|M.abscessus_ATCC_1997 TEVSEK-----ASDVRVIAAFRPGWFGYSLLTPIGWAGVVGVAFLANRIG :: . * :* ::..*: *: *: * : .. : : * Mb1258c|M.bovis_AF2122/97 LAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Rv1226c|M.tuberculosis_H37Rv LAVRLPESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTY Mvan_0755|M.vanbaalenii_PYR-1 VFGALRDSGLVRKGERAAESLGVLGAVTVVVAVVLTASVALSVLQSLLSY Mflv_0149|M.gilvum_PYR-GCK VLGALQDSQIVRAGEQATDRVGVAVAVALGAGAVLVASVVLSVTQSLISY MSMEG_0865|M.smegmatis_MC2_155 AGALMRDSAFAQSGLDAAERLGVAVSIAIVVGAVLVASVVLSVLRSLLTY MAB_1270|M.abscessus_ATCC_1997 DRFVSQFDGLSAQARAALAHIATPLLIVLG----VASGVAIVLFSYAARY . : . * .. :.: : .. : : * Mb1258c|M.bovis_AF2122/97 GNLLLRR---GGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVR Rv1226c|M.tuberculosis_H37Rv GNLLLRR---GGSGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLVR Mvan_0755|M.vanbaalenii_PYR-1 GNLVLRR-------DAEVLHLSHGLLRVREHTFDMRRLRGGTLREPLLVR Mflv_0149|M.gilvum_PYR-GCK GNLVLRR-------DAEVLHLSHGLLRVRERTFDMRRLRGGTLREPLLVR MSMEG_0865|M.smegmatis_MC2_155 GNLVLTRR--DGPGGDGVLHLQHGLLRVREHTYDMRRLRGGTLREPLLVR MAB_1270|M.abscessus_ATCC_1997 GGFRLEESPGTGSGEDPLLIYRRGLLETKAITFARSRIRGIRLTEPIPLR *.: * . :* :***..: *: *:** * **: :* Mb1258c|M.bovis_AF2122/97 LLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNT------- Rv1226c|M.tuberculosis_H37Rv LLRGARLDAVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNT------- Mvan_0755|M.vanbaalenii_PYR-1 LFGGARLDAVMTGVAGAGEASQLLPPCPRGTAEAVLADLIDRP------- Mflv_0149|M.gilvum_PYR-GCK LFGGARLDAVMTGVTGAGEASQLLPPCPRATAESVLIDLIEQP------- MSMEG_0865|M.smegmatis_MC2_155 VFGGARLDAVMTGIGGEGEASLLLPPCPAATARGVLTALIGRP------- MAB_1270|M.abscessus_ATCC_1997 WAKGARLHAEIVGH----KDIELLPPTARTFALHIARDVLSHHGLDAVAA ****.* :.* : **** . * : :: . Mb1258c|M.bovis_AF2122/97 DAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLW Rv1226c|M.tuberculosis_H37Rv DAAAGPLRRHGPAAARRRWTRALLVPTLAGVALIAAAPILGVPGWAWTLW Mvan_0755|M.vanbaalenii_PYR-1 DAVTGPLTAHGPVATRRRWTRAMLAPAAVVVGLAVVSVVTDVPGSAWLVP Mflv_0149|M.gilvum_PYR-GCK AAVTGPLTGHGRAAMRRRWTRAMTVPVLLAAALLVWAVFDAVPPWAWAAP MSMEG_0865|M.smegmatis_MC2_155 DAVSGPLRPHGPAATRRRWTRALVLPVIALPVLAVVG----VPVWAWVLW MAB_1270|M.abscessus_ATCC_1997 VSAGGRLAAHGRAARRVSLQESATVPLVLIVAAAGAAVINAESSFLVILA :. * * ** .* * .: * . . Mb1258c|M.bovis_AF2122/97 AVLTAG----CAGLAVDRVRSLGHRVADGWLVARAG-SLQRRRDCIACTG Rv1226c|M.tuberculosis_H37Rv AVLTAG----CAGLAVDRVRSLGHRVADGWLVARAG-SLQRRRDCIACTG Mvan_0755|M.vanbaalenii_PYR-1 AVLTVG----CGFLAFDRARSLGHRVGGGWLVARAG-SLQRRRDCVAAAG Mflv_0149|M.gilvum_PYR-GCK AATAVA----GALLAADRVRALGHRIGDGWLVARAG-SLQRRRDCIAAAG MSMEG_0865|M.smegmatis_MC2_155 ALVTVA----AALLAADRSRALGHRVDGDWLVAQAG-SVERRRDCLHTDG MAB_1270|M.abscessus_ATCC_1997 LVLLIVRLCYTWIVSGRRASAWGRRSNQPLVLAQSHPRLARNLSITTCDS :: * : *:* ::*:: : *. . . Mb1258c|M.bovis_AF2122/97 IIGWTVRQTLFQRRAGVATLVAATAAGRKGYQVLDVPAELAWSVAGAASP Rv1226c|M.tuberculosis_H37Rv IIGWTVRQTLFQRRAGVATLVAATVAGRKGYQVLDVPAELAWSVAGAASP Mvan_0755|M.vanbaalenii_PYR-1 IVGWTVRQSLPQRRAGVATLVAATAAGVKRYEVIDVPADLAWSIAAATSP Mflv_0149|M.gilvum_PYR-GCK IVGWTVRQTLFQRRAGVATLIAATAAGVKRYELIDVPADAAWAIAGATSP MSMEG_0865|M.smegmatis_MC2_155 IIGWTVRQTLLQRRAGVATLIAATAAGQKRYEVIDVPAGQAWAIAAAGTP MAB_1270|M.abscessus_ATCC_1997 ALGVRTRQSWRQRRAGVADLRIRSNAGDGALAVDCLPVIAATNLAVCLCP :* .**: ******* * : ** : :*. * :* . * Mb1258c|M.bovis_AF2122/97 WVADSVWLRHGS------------------------ Rv1226c|M.tuberculosis_H37Rv WVADSVWLRHGS------------------------ Mvan_0755|M.vanbaalenii_PYR-1 WVGATAWARR-------------------------- Mflv_0149|M.gilvum_PYR-GCK WLAATGWARR-------------------------- MSMEG_0865|M.smegmatis_MC2_155 WIADSVWAHTPVGSDLR------------------- MAB_1270|M.abscessus_ATCC_1997 VAATFARPVSPPADPEHAVARFERFGTLHHGMGMTT .