For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTVDDQRTGRPMAPSVLGAHAARAQRVGDPLPFDDSRHLEAHRFLVNEAYLLDAQDYDRWLGVLTEDIHY YMPVRITTAAGAGFDSSPGMAHFDENKYSLERRVARFATEHAWTEDPPSRLRHFITNVRTFLTDDADHLV VDSAELLFRSRGDVNESTLLSCGREDLLRRDGNALKLARRTICVDESVLRMQNLAVFL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0464 | - | - | 100% (198) | 3-phenylpropionate dioxygenase subunit beta |
| M. vanbaalenii PYR-1 | Mvan_0487 | - | 3e-31 | 45.16% (155) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
| M. vanbaalenii PYR-1 | Mvan_0483 | - | 4e-31 | 45.16% (155) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0684 | - | 1e-111 | 97.98% (198) | 3-phenylpropionate dioxygenase subunit beta |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4367c | - | 4e-23 | 34.30% (172) | biphenyl dioxygenase beta subunit |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_3510 | - | 2e-73 | 77.98% (168) | 3-phenylpropionate dioxygenase subunit beta |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_3344 | - | 4e-09 | 27.95% (161) | PUTATIVE beta subunit of hydroxylase component of benzoate |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_0464|M.vanbaalenii_PYR-1 MTVDDQRTGRPMAPSVLGAHAARAQRVGDPLPFDDSRHLEAHRFLVNEAY
Mflv_0684|M.gilvum_PYR-GCK MTVDDQRTGRPMAPSVLGAHAARAQRVGDPLPFDDSRHLEAHRFLVNEAY
MAV_3510|M.avium_104 -------MRKPLT----------------CLPFDDARHLQAHQFLVDEAY
MAB_4367c|M.abscessus_ATCC_199 --MDAKIIPG--------------------ALADRDTHFDVAQFYYSEAE
TH_3344|M.thermoresistible__bu ----------------------------VAPVPDWVDRFEVEQFLFREAR
* :::. :* **
Mvan_0464|M.vanbaalenii_PYR-1 LLDAQDYDRWLGVLTEDIHYYMPVRITTAAG---AGFDSSPGMAHFDENK
Mflv_0684|M.gilvum_PYR-GCK LLDAQDYDRWLGVLTEDIHYYMPVRITTAAG---AGFDSSPGMAHFDENK
MAV_3510|M.avium_104 LLDAQHYQAWLDTLTDDVRYVMPVRVTTARG---AGFDTSPGMAHFDEDK
MAB_4367c|M.abscessus_ATCC_199 LLDEGRYVDWLELLADDVDYWMPLRTNRLRRQQALSVAARGEAAYYDETK
TH_3344|M.thermoresistible__bu YADESEYDAWEALWTDDALYWVPVDG--------ADSDPRRQMSVIYDNR
* * * ::* * :*: . . : : :
Mvan_0464|M.vanbaalenii_PYR-1 YSLERRVARFATEHAWTEDPPSRLRHFITNVRTFLT-----DDADHLVVD
Mflv_0684|M.gilvum_PYR-GCK YSLSRRVARFATEHAWTEDPPSRLRHFITNVRTFLT-----DDADYLAVD
MAV_3510|M.avium_104 YSLSQRVARFATEHAWTEDPPSRLRHFVTNVRTFVE-----DDR-HLLVE
MAB_4367c|M.abscessus_ATCC_199 ESLAWRIRRFDSGMAWAEDPPSRTRHLITNISVRYAEPDKGAEACDLVAR
TH_3344|M.thermoresistible__bu SRISTRLNHARTGRRYAASPPSNLRRLISNIEYVCG-RANPDGGLDVEVE
: *: : : :: .***. *::::*: : .
Mvan_0464|M.vanbaalenii_PYR-1 SAELLFRSRGDVNESTLLSCGREDLLRRDGNALKLARRTICVDESVLRMQ
Mflv_0684|M.gilvum_PYR-GCK SAELLFRSRGDVNESTLISCGREDLLRRDGNALKLARRTICVDESVLRMQ
MAV_3510|M.avium_104 SAELLFRSRGDVNESALVSCGREDVLRWSEDRWKLARRSIFVDESVLRMQ
MAB_4367c|M.abscessus_ATCC_199 SAFLVYRNRLEREENIFAGARTDSLRRVDDHRFLIARRFILLDQNILQAK
TH_3344|M.thermoresistible__bu ANVLIFESR--IRENRLWGGRVTYRIRKTPDGLRLAYKKVVLVDNDKPLP
: *::..* .*. : . * . :* : : : :.
Mvan_0464|M.vanbaalenii_PYR-1 NLAVFL
Mflv_0684|M.gilvum_PYR-GCK NLAVFL
MAV_3510|M.avium_104 NLAVFL
MAB_4367c|M.abscessus_ATCC_199 NICTFF
TH_3344|M.thermoresistible__bu TLSFLI
.:. ::