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VMDRFRWPDGKTAAAAFTFDVDAESAILWGNESVGARMSVMSHQAYGPLVGIPRILDLLEQHQVPSTFFV PGHTADRYPEAVRSIVAAGHEIAHHGYLHEQPTALTLEQEIDALDRGLAALADVAGVRPVGYRAPMWDLS WRTPALLAERDFLYDSSLMDADHPYELAITPGAQESLVEIPIQWALDDWEQYCFLPDISGSGLIETPRKA RELWQSEFDALRKVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHDDVWVSSLGAVAEHVRSLNLSPRS ITPPDVPR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0047 | - | - | 100% (288) | polysaccharide deacetylase |
| M. vanbaalenii PYR-1 | Mvan_3151 | - | 3e-20 | 28.42% (285) | polysaccharide deacetylase |
| M. vanbaalenii PYR-1 | Mvan_0934 | - | 9e-16 | 26.48% (287) | polysaccharide deacetylase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0796 | - | 1e-148 | 93.89% (262) | polysaccharide deacetylase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0916c | - | 3e-17 | 27.64% (275) | putative polysaccharide deacetylase |
| M. marinum M | MMAR_1211 | - | 6e-17 | 27.84% (291) | chitinase |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_1074 | - | 1e-136 | 81.65% (278) | polysaccharide deacetylase |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2681 | - | 3e-16 | 27.49% (291) | chitinase |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_0047|M.vanbaalenii_PYR-1 -------------MMDRFRWPDGKTAAAAFTFDVDA--ESAILWGN----
Mflv_0796|M.gilvum_PYR-GCK --------------MDAFRWPDGKTAAAAFTFDVDA--ESAVLWGD----
MSMEG_1074|M.smegmatis_MC2_155 ---------MASESAPGLVWPEGKVAAAAFTFDVDA--ESAILWGN----
MMAR_1211|M.marinum_M MTGYPRDMTGYGRTPPDPQWPGGALIAVQFVLNYEEGAESSVLDGDSGSE
MUL_2681|M.ulcerans_Agy99 MTGYPRDMTGYGRTPPDPQWRGGALIAVQFVLNYEEGAESSVLDGDSGSE
MAB_0916c|M.abscessus_ATCC_199 -------------MRQTGWGPDGRRAAACITFDHLG--EAAEIQIG----
* *. :.:: *:: : .
Mvan_0047|M.vanbaalenii_PYR-1 ----ESVGAR------MSVMSHQAYGPLVGIPRILDLLEQHQVPSTFFVP
Mflv_0796|M.gilvum_PYR-GCK ----ESVGAR------MSVMSHQAYGPLVGIPRILDLLEQHQITSTFFVP
MSMEG_1074|M.smegmatis_MC2_155 ----EAVGAR------MSVMSHQAYGPLVGVPRILDLLDRHQIASTFFVP
MMAR_1211|M.marinum_M TFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQSGVPLTIFAV
MUL_2681|M.ulcerans_Agy99 TFLSEIVPAQSFPNRHMSMESLYEYGSRAGVWRVLRVCEQSGVPLTIFAV
MAB_0916c|M.abscessus_ATCC_199 -----ALPPD-------TVVGAHPS-VTHCLPALLAALAERSTACTFYVE
: . :: . : :* . . *::.
Mvan_0047|M.vanbaalenii_PYR-1 GHTADRYPEAVRSIVAAGHEIAHHGYLHEQPTALTLEQEIDALDRGLAAL
Mflv_0796|M.gilvum_PYR-GCK GHTADRYPEAVRSIVGAGHEIAHHGYLHEQPTALTLEEEIDALDRGLAAL
MSMEG_1074|M.smegmatis_MC2_155 GHTAHRYPDAVRAIVAAGHEVAHHGYLHEQPTALTLEEEIEALDRGLEAL
MMAR_1211|M.marinum_M AQAMQRNPEVAKVFRELGHEIACHGLRWKSYQEIDRDTERAHLSEAVRIH
MUL_2681|M.ulcerans_Agy99 AQAMQRNPEVAKGFRELGHEIACHGLRWKSYQEIDRDTERAHLSEAVRIH
MAB_0916c|M.abscessus_ATCC_199 TWNYAHYPRALESILEHGHEIGWHGWLHEPWSKSTGSAIADSIAESLNAF
: * . . : ***:. ** : . : ..:
Mvan_0047|M.vanbaalenii_PYR-1 ADVAGVRPVGYRAPMWDLSWRTPALLAERDFLYDSSLMDADHPYELAITP
Mflv_0796|M.gilvum_PYR-GCK ADVAGVRPAGYRAPMWDLSWRTPALLAERGFLYDSSLMDADHPYELAVTP
MSMEG_1074|M.smegmatis_MC2_155 AEVAGVTPAGYRAPMWDLSWHTPGLLAERNFLYDSSLMDADVPYELAVG-
MMAR_1211|M.marinum_M HELTGSAPRGWYG-GRDSPHTRELVVEHGGFLYDSDSYADDLPYWVRVG-
MUL_2681|M.ulcerans_Agy99 HELTGSAPRGWYG-GRDSPHTRELVVEHGGFLYDSDSYADDLPYWVRVG-
MAB_0916c|M.abscessus_ATCC_199 ER-TGIRPRGARPPGGLLGDHSLDLLAQAGFDHVSLAGTRSG--------
:* * * :: . .* : * .
Mvan_0047|M.vanbaalenii_PYR-1 GAQESLVEIPIQWALDD----WEQYCFLPDISGSGLIETPRKARELWQSE
Mflv_0796|M.gilvum_PYR-GCK GAAQSLVEIPIQWALDD----WEQYCFLPDISGSGLIESPRKARELWQLE
MSMEG_1074|M.smegmatis_MC2_155 --DTSLVEIPIQWALDD----WEQYCFLPDISGSGLIESPRKARELWQLE
MMAR_1211|M.marinum_M --ASDHLVVPYTLDTND----MRFASPAGFSNGDEFFAHLRDAFDVLYAE
MUL_2681|M.ulcerans_Agy99 --ASDHLVVPYTLDTND----MRFASPAGFSNGDEFFAHLRDAFDVLYAE
MAB_0916c|M.abscessus_ATCC_199 -LQDGLALLPFAWSTVDGSYYFDSFAKLRVPPGEHAVGAPG-LLAAYDRY
. :* * . *. .
Mvan_0047|M.vanbaalenii_PYR-1 FDALRKVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHDDVWVSSLGAV
Mflv_0796|M.gilvum_PYR-GCK FDALRRVGGCWVLTNHPFLTGRPSRAAELGELMRYVLDHDDVWVVSQA--
MSMEG_1074|M.smegmatis_MC2_155 FDALRRAGGCWVLTNHPFLSGRASRAAELDDLMRYVTEHADVWTTNLGTL
MMAR_1211|M.marinum_M GRAGSPK--MLSVGLHCRLVGRPARTAALQRFLDHVRSHDRVWLARRVEI
MUL_2681|M.ulcerans_Agy99 GRAGSPK--MLSVGLHCRLVGRPARTAALQRFLDHVRSHDRVWLARRVEI
MAB_0916c|M.abscessus_ATCC_199 LDETVASGGLATFVFHVPWQDQPDRVGAVVNLIDRIADDSRIWLASAGEI
. * .:. *.. : :: : .. :*
Mvan_0047|M.vanbaalenii_PYR-1 AEHVRSLNLSPRSITPPDVPR--
Mflv_0796|M.gilvum_PYR-GCK -----------------------
MSMEG_1074|M.smegmatis_MC2_155 ARHVRAQGLTPRSITQPGK----
MMAR_1211|M.marinum_M AEHWREVHPAPTG----------
MUL_2681|M.ulcerans_Agy99 AEHWREVHPAPTG----------
MAB_0916c|M.abscessus_ATCC_199 ADWMRAHPDSVPAVQHVDELPAW