For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RWLRILPAKAHCLLRPDAVQMSRGPASRALYSKSACRCAGTYWAVGPRAVRVGCHNHHSCLRISGVALRG SVIVASAAMFVAGALGVAPAGHAAVCGSVGGVHVDVSGCADPLYELNDALAPPPPPPPPPPPPPGAPPPP PPPPPPPPPPVYIPPPLPNVNVCADVGRRINVSGCI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4819 | - | - | 100% (177) | hypothetical protein Mflv_4819 |
| M. gilvum PYR-GCK | Mflv_3145 | - | 1e-19 | 52.17% (92) | hypothetical protein Mflv_3145 |
| M. gilvum PYR-GCK | Mflv_2951 | - | 2e-13 | 41.49% (94) | hypothetical protein Mflv_2951 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1107 | pra | 9e-10 | 52.73% (55) | proline-rich antigen |
| M. tuberculosis H37Rv | Rv1078 | pra | 9e-10 | 52.73% (55) | proline-rich antigen |
| M. leprae Br4923 | MLBr_02395 | Ag36 | 9e-10 | 49.21% (63) | proline rich antigenic protein |
| M. abscessus ATCC 19977 | MAB_1963 | - | 8e-13 | 38.53% (109) | MmpS family protein |
| M. marinum M | MMAR_2607 | - | 5e-15 | 48.91% (92) | hypothetical protein MMAR_2607 |
| M. avium 104 | MAV_1247 | - | 3e-11 | 43.37% (83) | hypothetical protein MAV_1247 |
| M. smegmatis MC2 155 | MSMEG_5916 | - | 2e-15 | 46.91% (81) | hypothetical protein MSMEG_5916 |
| M. thermoresistible (build 8) | TH_1481 | ftsY | 7e-07 | 43.75% (48) | PROBABLE CELL DIVISION PROTEIN FTSY (SRP RECEPTOR) (SIGNAL |
| M. ulcerans Agy99 | MUL_0202 | pra | 2e-12 | 60.00% (55) | proline-rich antigen Pra-like protein |
| M. vanbaalenii PYR-1 | Mvan_1623 | - | 6e-42 | 59.71% (139) | hypothetical protein Mvan_1623 |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_1963|M.abscessus_ATCC_1997 MSGTDNPGSGNPGEVPDLDGPNEEAAAPDSSGADSAAFHSQAYSAPESEQ
MAV_1247|M.avium_104 -------------------------------------------------M
Mb1107|M.bovis_AF2122/97 --------------------------------------------------
Rv1078|M.tuberculosis_H37Rv --------------------------------------------------
MUL_0202|M.ulcerans_Agy99 --------------------------------------------------
MLBr_02395|M.leprae_Br4923 --------------------------------------------------
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4819|M.gilvum_PYR-GCK -----------------------------MRWLRILPAKAHCLLRPDAVQ
Mvan_1623|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2607|M.marinum_M --------------------------------------------------
TH_1481|M.thermoresistible__bu ------VSEGLWIAIAIIAVVLVAALIVGLVLYRRRRIRLTKRDEAKPVE
MAB_1963|M.abscessus_ATCC_1997 FTSPYVPYDEYET---------QLVDGEEPPPPRWPWVVGVAA-----II
MAV_1247|M.avium_104 FGDRFNTGNEEAA---------LLARGFQYGTAPNALVIGWNG-----GH
Mb1107|M.bovis_AF2122/97 MTEQPPPGGSYP----------PPPPPPGPSGGHEP------------PP
Rv1078|M.tuberculosis_H37Rv MTEQPPPGGSYP----------PPPPPPGPSGGHEP------------PP
MUL_0202|M.ulcerans_Agy99 MTDQPPPGGSYP----------PPPPPPGSSGGSEPPAGGYQA----PPP
MLBr_02395|M.leprae_Br4923 MTDQPPPSGSNPT---------PAPPPPGSSGGYEPSFAPSELGSAYPPP
MSMEG_5916|M.smegmatis_MC2_155 MGGALFAGATGA----------AALAGAQPAGDSAP------------MS
Mflv_4819|M.gilvum_PYR-GCK MSRGPASRALYSKSACRCAGTYWAVGPRAVRVGCHNHHSCLR-----ISG
Mvan_1623|M.vanbaalenii_PYR-1 MSQSPVER----------------VRPTASRIDCHNHHDLGGEGRRPIRG
MMAR_2607|M.marinum_M MGSESNEA-------------------LAKEISMSPWK----------RP
TH_1481|M.thermoresistible__bu RGGGYTTSSGITFS-------QSATPTKAPPTKAAPERIDTTGLPGVGDD
MAB_1963|M.abscessus_ATCC_1997 AAITLVASVALLVAGRSDETNGAAKSSTVIPTPSTTPWNEIITTTTPPPP
MAV_1247|M.avium_104 TAVTLPDGTAVSSGEHGGVHVGGAGAYQAGFTHHMFLPMPPEDGGAPPPA
Mb1107|M.bovis_AF2122/97 AAPPGGSGYAPPPPPS--SGSGYPPPPPPP--GGGAYPPPPPSAGGYAPP
Rv1078|M.tuberculosis_H37Rv AAPPGGSGYAPPPPPS--SGSGYPPPPPPP--GGGAYPPPPPSAGGYAPP
MUL_0202|M.ulcerans_Agy99 PSAPSGGGYPPPPPPPPPSTSGYPPPPPPPPLEGGYPPPPPPSAGGYAPP
MLBr_02395|M.leprae_Br4923 TAPPVGGSYPPPPPPG-----GSYPPPPPP---GGSYPPPPPSTGAYAPP
MSMEG_5916|M.smegmatis_MC2_155 VLGPVPAFPPPPPPPP--PFWGPPPPPPPP---PPFWRPPPPPPIWLPPP
Mflv_4819|M.gilvum_PYR-GCK VALRGSVIVASAAMFV-AGALGVAPAGHAAVCGSVGGVHVDVSGCADPLY
Mvan_1623|M.vanbaalenii_PYR-1 VALRKSWLVASAAVVLGASVPALTPAPAYAVCGSISGVNVDVTGCADPLY
MMAR_2607|M.marinum_M SATAAIAALAFTALPQVLAVMAPSGAAQADVCVNAG-RRVSVSGCAN---
TH_1481|M.thermoresistible__bu ATIPRDAPKRPIADVRLPEPPAAPPKPPPPAEVPPTEPPAPPVATPSPAE
.
MAB_1963|M.abscessus_ATCC_1997 PPP----PPPTTEPPPPPPPPVVTETVTVEPPPPPPPPVTTHEAPPPVTT
MAV_1247|M.avium_104 MFG----PPPPPDAPPPPPD---------APAPPPDAPPAPPEAPAVLID
Mb1107|M.bovis_AF2122/97 PPG----PAIRTMPTESYTPWITRVLAAFIDWAPYVVLVGIGWVIMLVTQ
Rv1078|M.tuberculosis_H37Rv PPG----PAIRTMPTESYTPWITRVLAAFIDWAPYVVLVGIGWVIMLVTQ
MUL_0202|M.ulcerans_Agy99 PPG----PAIRALPAESYTPWITRVLAALIDFAPYVVVTGIGWLIMMVTT
MLBr_02395|M.leprae_Br4923 PPG----PAIRSLPKEAYTFWVTRVLAYVIDNIPATVLLGIGMLIQTLTK
MSMEG_5916|M.smegmatis_MC2_155 PPP----PPFWGPPPPPRPPGHWR--------------------------
Mflv_4819|M.gilvum_PYR-GCK ELNDALAPPPPPPPPPPPPPGAPPPPPPPPPPPPPPVYIPPP-LPNVNVC
Mvan_1623|M.vanbaalenii_PYR-1 ELN---AAPPPPPPPPPPPP--PPPPPVYVPPPPPPVYVPPVYVPHVSVC
MMAR_2607|M.marinum_M -------IADAIAPYVPPPAEYAPLPEDYPPPPPPP--------PNVNVC
TH_1481|M.thermoresistible__bu TAP-PVEPEAAPETTPEPEPGAAPAAPQLDEIAPAEGRLDRLRGRLAKSQ
.
MAB_1963|M.abscessus_ATCC_1997 TTTPPPPP-----------------------PPTTT---TPAGPRQITYS
MAV_1247|M.avium_104 APAPVPPP-----------------------PPGP---------------
Mb1107|M.bovis_AF2122/97 TSSCVTSI-----------------------SEYDVGQFCVSQPSMIGQL
Rv1078|M.tuberculosis_H37Rv TSSCVTSI-----------------------SEYDVGQFCVSQPSMIGQL
MUL_0202|M.ulcerans_Agy99 TPSCVTDI-----------------------SQYDIGQYCVSQPSMIGQL
MLBr_02395|M.leprae_Br4923 QEACVTDI-----------------------TQYNVNQYCATQPTGIGML
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4819|M.gilvum_PYR-GCK ADVGRRIN-----------------------VSGCI--------------
Mvan_1623|M.vanbaalenii_PYR-1 ADVGRRIS-----------------------VAGCV--------------
MMAR_2607|M.marinum_M ANVGRRIS-----------------------VSGCV--------------
TH_1481|M.thermoresistible__bu TAIGRSMLGLLGGGDLDEESWEEIEDTLLIADLGPVVTTSVVEKLREQMA
MAB_1963|M.abscessus_ATCC_1997 VTGSKAPLDRISITWTDGSGRTRVNPNV-YIPWSITVTPISNSEIGSVSA
MAV_1247|M.avium_104 --------------------------------------------------
Mb1107|M.bovis_AF2122/97 VQWLLSVGGLAYLVWNYGYRQGTTGSSIGKSVLKFKVVSETTGQPIGFGM
Rv1078|M.tuberculosis_H37Rv VQWLLSVGGLAYLVWNYGYRQGTIGSSIGKSVLKFKVVSETTGQPIGFGM
MUL_0202|M.ulcerans_Agy99 AQWLLSLVGLAYLVWDYGYRQGTTGSSIGKSIMKFKVVSETTGEPLGFGM
MLBr_02395|M.leprae_Br4923 AFWFAWLMATAYLVWNYGYRQGATGSSIGKTVMKFKVISEATGQPIGFGM
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4819|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1623|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2607|M.marinum_M --------------------------------------------------
TH_1481|M.thermoresistible__bu ASRVRTEADARAVLREVLISELRPDLDRSVKALPHDDKPSVLLVVGVNGT
MAB_1963|M.abscessus_ATCC_1997 SSFLRLSQLNCTITTSDGQVLSSNNNNSAQATC-----------------
MAV_1247|M.avium_104 --------------------------------------------------
Mb1107|M.bovis_AF2122/97 SVVRQLAHFIDAIICFVGFLFPLWDAKRQTLADKIMTTVCVPI-------
Rv1078|M.tuberculosis_H37Rv SVVRQLAHFIDAIICFVGFLFPLWDAKRQTLADKIMTTVCVPI-------
MUL_0202|M.ulcerans_Agy99 SVVRQLAHIVDAVICYIGFLFPLWDAKRQTLADKIMTTVCLPL-------
MLBr_02395|M.leprae_Br4923 SVVRQLAHFVDAVICCIGFLFPLWDSKRQTLADKIMTTVCLPI-------
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4819|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1623|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2607|M.marinum_M --------------------------------------------------
TH_1481|M.thermoresistible__bu GKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLETWASRVGAEVVRG
MAB_1963|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_1247|M.avium_104 --------------------------------------------------
Mb1107|M.bovis_AF2122/97 --------------------------------------------------
Rv1078|M.tuberculosis_H37Rv --------------------------------------------------
MUL_0202|M.ulcerans_Agy99 --------------------------------------------------
MLBr_02395|M.leprae_Br4923 --------------------------------------------------
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4819|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1623|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2607|M.marinum_M --------------------------------------------------
TH_1481|M.thermoresistible__bu REGADPASVAFDAVDTGIKNGADVVLIDTAGRLHTKTGLMDELGKVKRVV
MAB_1963|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_1247|M.avium_104 --------------------------------------------------
Mb1107|M.bovis_AF2122/97 --------------------------------------------------
Rv1078|M.tuberculosis_H37Rv --------------------------------------------------
MUL_0202|M.ulcerans_Agy99 --------------------------------------------------
MLBr_02395|M.leprae_Br4923 --------------------------------------------------
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4819|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1623|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_2607|M.marinum_M --------------------------------------------------
TH_1481|M.thermoresistible__bu KKRAAVDEVLLVLDATIGQNSLPQAKVFAEVVDITGVVLTKLDGTAKGGI
MAB_1963|M.abscessus_ATCC_1997 --------------------------------------
MAV_1247|M.avium_104 --------------------------------------
Mb1107|M.bovis_AF2122/97 --------------------------------------
Rv1078|M.tuberculosis_H37Rv --------------------------------------
MUL_0202|M.ulcerans_Agy99 --------------------------------------
MLBr_02395|M.leprae_Br4923 --------------------------------------
MSMEG_5916|M.smegmatis_MC2_155 --------------------------------------
Mflv_4819|M.gilvum_PYR-GCK --------------------------------------
Mvan_1623|M.vanbaalenii_PYR-1 --------------------------------------
MMAR_2607|M.marinum_M --------------------------------------
TH_1481|M.thermoresistible__bu VFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG