For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SISLPGFDTWLTDRLEECAGDSGEPVDTYVARAVASQMVTDCERVDRASAGRLKAHLSLTGLSGEATADG LSSVLADPTRLRALNATGLTDTSPDATYARLTRTTADALSVPAAALVLIAVDRQFVISAVGSIPPADQTG LTESFGKYVVANGSLVSVDDARQHPLFKKYAAVARGRVVAYLGTPVADGAGNTVGALSVSDTAARRWTSG EMQILGDLAAVAVARIFGS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4745 | - | - | 100% (230) | putative GAF sensor protein |
| M. gilvum PYR-GCK | Mflv_4311 | - | 2e-36 | 37.61% (234) | putative GAF sensor protein |
| M. gilvum PYR-GCK | Mflv_1493 | - | 1e-31 | 47.06% (153) | putative GAF sensor protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_4553 | - | 3e-05 | 28.81% (118) | GAF domain-containing protein |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2036 | - | 2e-37 | 38.16% (228) | putative GAF sensor protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4745|M.gilvum_PYR-GCK MSISLPGFDTWLTDRLEECAGDSGEPVDTYVARAVASQMVTDCERVDRAS
Mvan_2036|M.vanbaalenii_PYR-1 ----MSGFDEWMNDALDHEAAKSGESVELYVSRAVAGRMALERARRGDHG
MSMEG_4553|M.smegmatis_MC2_155 -----------------MSTAEPHRTDTTPALSPVAANLEAVAEKLG---
:... .. . .**..: : .
Mflv_4745|M.gilvum_PYR-GCK AGRLKAHLSLTGLSGEATADGLSS--VLADPTRLRALNATGLTDTSPDAT
Mvan_2036|M.vanbaalenii_PYR-1 LDELVDHIRELDLEIPGRSADLASGSVISDPERLQALYESGLLNTERAGS
MSMEG_4553|M.smegmatis_MC2_155 ------------------------------------------------VK
.
Mflv_4745|M.gilvum_PYR-GCK YARLTRTTADALSVPAAALVLIAVDRQFVISAVGSIPPADQTG---LTES
Mvan_2036|M.vanbaalenii_PYR-1 LDRVVEMVVAALAVPCAAVTLLDKDTQYVCSAIGLTGELAVTRKGPIEGS
MSMEG_4553|M.smegmatis_MC2_155 SVLVMRSEPDSMVVAATAG---EATKHYTVGAAGRKAGSDAGR----VPL
: . :: *..:* ::. .* *
Mflv_4745|M.gilvum_PYR-GCK FGKYVVANGSLVSVDDARQHPLFKKYAAVARGRVVAYLGTPVADGAGNTV
Mvan_2036|M.vanbaalenii_PYR-1 LGREILISGQPLIVEDARREPLLQDHYAVRDGLVVAYAGFPLTDAAGHTI
MSMEG_4553|M.smegmatis_MC2_155 YCERVVASDETLFVRDSRQDNTFAGNEDETEFGLSNYLGLAVHDGSGNVV
. :: ... : * *:*:. : : * * .: *.:*:.:
Mflv_4745|M.gilvum_PYR-GCK GALSVSDTAARRWTSGEMQILGDLAAVAVARIFGS-----
Mvan_2036|M.vanbaalenii_PYR-1 GTLSAWDLKPRRWTSGHLQLMEDFVAMLRARVFGIQPD--
MSMEG_4553|M.smegmatis_MC2_155 GTVCVLDDTARDYSDDDRRELEELRAQVEQIVARDDTALG
*::.. * .* ::... : : :: * :