For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MASQVPGFDERLDDALVDEAARAGEPVDVFIARAVAARIAVEMARRSDPDLDGILRRLRLMDLSPPRPGL PADTGSVIADPERLQALYETGLLDERRGPVLDRIVEMTVAALAVPTAVVSLVDRDSVYLPSAIGMPGVLA AARQVSLERSISRPIVATGEPVIVEDARSHPALRDHPMVLDGFVVGFAAMPITNSGGHTIGTLAVWDSTP RRWTDGHIQILEDFTAIICDRIFGRGAA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4311 | - | - | 100% (238) | putative GAF sensor protein |
| M. gilvum PYR-GCK | Mflv_4745 | - | 2e-36 | 37.61% (234) | putative GAF sensor protein |
| M. gilvum PYR-GCK | Mflv_1493 | - | 3e-32 | 40.66% (182) | putative GAF sensor protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_0738 | - | 1e-05 | 22.98% (235) | two-component sensor and regulator |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2036 | - | 7e-68 | 53.91% (230) | putative GAF sensor protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M MSANAAAPGTPNRQPLPEDLQAAIALGGEMGRRFAEFDWAHHRLGPPGDW
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M APEVRAAVAMTLTSRFPIVLWLSPTDLFLMYNDAYAQILGDKHPAALGSA
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M GKAVWPEIWTAIGPMLAGVVATGKATWSTDLMLLLMTAGVPQERYFTFTY
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M SPIISGGAVPAIFCAVIETTQRVLSDRRLHLLNAVASAVLETHTIDDAIG
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M AAVTACAAQPADLPFIAVYVAADGADAGAGRHRITLRGATPSVLPVLPQL
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M LAELTDWDMASRSRESAHVVGELARVIPGICEVFTDDCPTQALVLPLSEG
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M STPGAVVIGISPRRPLDALYRGFCQLLVDQLSAALASVVSYERQRQRADA
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M LAELDRAKTAFLTNVSHEFRTPLTLLLGPVEDALADAGGDTVLADRLDTA
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M RRNARRLQRMVDSLLAFSRIEAGRATARLVCTDVGTLTSHIASSFTELCA
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M RAGLDLALDCAPALADVDPGMWETIVLNLLSNAVKYTMKGSIAVEVRSEA
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M AHCRLVVRDTGTGIAPADLQRLFERFYRAENAGGRSAEGSGIGLSLVRGL
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M VELQRGTVHIDSEPGRGTAVTIRLPRSPTGAAADQSPAALLDETNPYVEE
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M ASQWLVSSPAQVQAAPEQPRQLVLIADDNADMRAHLHRVLSPHWETVLVA
Mflv_4311|M.gilvum_PYR-GCK ------------------MASQVPGFD-ERLDDALVDEAARAGEPVDVFI
Mvan_2036|M.vanbaalenii_PYR-1 ----------------------MSGFD-EWMNDALDHEAAKSGESVELYV
MMAR_0738|M.marinum_M DGESALNATRSLHPDLVVTDVMMPGLDGFEFIAAIRADPVLAATPVLMLS
:.*:* : *: :.. :. .* :
Mflv_4311|M.gilvum_PYR-GCK ARAVAARIAVEMARRSDPDLDGILRRLRLMDLSPPRPGLPADTGSVIADP
Mvan_2036|M.vanbaalenii_PYR-1 SRAVAGRMALERARRGDHGLDELVDHIRELDLEIPGRSADLASGSVISDP
MMAR_0738|M.marinum_M ARAGAEAVSDGFAGGADDYLLKPFRSQELVERVTSRLAAVARERTRQGLA
:** * :: * .* * . . :: . . : . .
Mflv_4311|M.gilvum_PYR-GCK ERLQALYETGLLDERRGPVLDRIVEMTVAALAVPTAVVSLVDRDSVYLPS
Mvan_2036|M.vanbaalenii_PYR-1 ERLQALYESGLLNTERAGSLDRVVEMVVAALAVPCAAVTLLDKDTQYVCS
MMAR_0738|M.marinum_M ARLMQLDAALQATDSVAGILAAVLHYRLASGDAAAAAIGVVDGDYVRFEY
** * : . * ::. :*: .. *.: ::* * .
Mflv_4311|M.gilvum_PYR-GCK AIGMPGVLAAARQVSLERS--ISRPIVATGEPVIVEDARSHPALRDHPMV
Mvan_2036|M.vanbaalenii_PYR-1 AIGLTGELAVTRKGPIEGS--LGREILISGQPLIVEDARREPLLQDHYAV
MMAR_0738|M.marinum_M AGAIPAELRDRYHVARLDSPLVGTDVIHRGEPMLITDTLDLPPRYQHAVQ
* .:.. * : . * :. :: *:*::: *: * :*
Mflv_4311|M.gilvum_PYR-GCK LDG-FVVGFAAMPITNSGGHTIGTLAVWDSTPRRWTDGHIQILED-----
Mvan_2036|M.vanbaalenii_PYR-1 RDG-LVVAYAGFPLTDAAGHTIGTLSAWDLKPRRWTSGHLQLMED-----
MMAR_0738|M.marinum_M DTAEIVRACVAQPLRNADGRVIGVLTLLWPTPRQFDASELEMFTRTAEIT
. :* . .. *: :: *:.**.*: .**:: ..::::
Mflv_4311|M.gilvum_PYR-GCK FTAIICDRIFGRGAA-----------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 FVAMLRARVFGIQPD-----------------------------------
MMAR_0738|M.marinum_M QIALDRVRVMTREHRIAADFQEHLLDLDRGSTSAVVSAVYQPAGEAMRVG
*: *::
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M GDWYSVTPLAHPGRIAISVGDVVGHGLAAAIVMSRLRAAVAASALNTAEP
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M ADVLGALDKYAATVPGASCATVAYALIDTTPAGAGAMSYICAGHPYPLVV
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M SPNASPVFLKSGRRPPVATRGTDSTDVTARADLPAGSLIIFYTDGLMERA
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M GETLDDGFARLADAAADCSAMPVAAVCAELLHRMCPAEGYRDDVVVLALR
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M PSHAGPRSFATVLTAVPAEIPVARRRMAQWLTAIGVDPVRKGAILLATGE
Mflv_4311|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_0738|M.marinum_M AVTNAIEHGSGCDAGKTVSVEAFLDQDAIAVTVSDQGRWTGDSSASLRSQ
Mflv_4311|M.gilvum_PYR-GCK -------------------------------------
Mvan_2036|M.vanbaalenii_PYR-1 -------------------------------------
MMAR_0738|M.marinum_M RRGRGLTLMSGLANRVETVRTPQGTRVVLQFDAATVD