For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCPDCGAAKTDFEMVEVARP*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4719 | - | - | 100% (60) | rubredoxin-type Fe(Cys)4 protein |
| M. gilvum PYR-GCK | Mflv_4720 | - | 6e-12 | 50.00% (50) | rubredoxin-type Fe(Cys)4 protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3278c | rubB | 4e-30 | 86.44% (59) | rubredoxin RubB |
| M. tuberculosis H37Rv | Rv3250c | rubB | 5e-30 | 86.44% (59) | rubredoxin RubB |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3597c | - | 2e-29 | 83.05% (59) | rubredoxin RubB |
| M. marinum M | MMAR_1293 | rubB | 3e-31 | 90.00% (60) | rubredoxin RubB |
| M. avium 104 | MAV_4213 | - | 1e-34 | 98.33% (60) | rubredoxin |
| M. smegmatis MC2 155 | MSMEG_1841 | - | 1e-31 | 88.33% (60) | rubredoxin |
| M. thermoresistible (build 8) | TH_0468 | rubB | 7e-31 | 89.47% (57) | PROBABLE RUBREDOXIN RUBB |
| M. ulcerans Agy99 | MUL_2594 | rubB | 2e-31 | 90.00% (60) | rubredoxin RubB |
| M. vanbaalenii PYR-1 | Mvan_1744 | - | 5e-33 | 91.67% (60) | rubredoxin-type Fe(Cys)4 protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3278c|M.bovis_AF2122/97 -------MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCP
Rv3250c|M.tuberculosis_H37Rv -------MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCP
TH_0468|M.thermoresistible__bu --------VDYKLYMCVQCGFEYDEAKGWPEEGIAPGTRWEDIPDDWSCP
Mvan_1744|M.vanbaalenii_PYR-1 -------MSDYKLFICVQCGFEYDEAKGWPEDGIEPGTRWDDIPDDWSCP
Mflv_4719|M.gilvum_PYR-GCK -------MSDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCP
MAV_4213|M.avium_104 -------MSDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCP
MSMEG_1841|M.smegmatis_MC2_155 -------MSHYRLFVCVQCGFEYDEAKGWPEDGIAPGTRWEDIPEDWSCP
MMAR_1293|M.marinum_M -------MSDYKLYQCVQCGFEYDEALGWPEDGIAPGTRWDDIPEDWSCP
MUL_2594|M.ulcerans_Agy99 -------MSDYKLYQCVQCGFEYDEALGWPEDGIAPGTRWDDIPEDWSCP
MAB_3597c|M.abscessus_ATCC_199 MSDETCVDSEYKLYECMQCGFQYDEALGWPEDGIEPGTRWDDIPEDWSCP
.*:*: *:****:**** ****:** .****:***:*****
Mb3278c|M.bovis_AF2122/97 DCGAAKSDFEMVEVARS
Rv3250c|M.tuberculosis_H37Rv DCGAAKSDFEMVEVARS
TH_0468|M.thermoresistible__bu DCGAAKSDFEMVEVARS
Mvan_1744|M.vanbaalenii_PYR-1 DCGAAKSDFEMVEVARP
Mflv_4719|M.gilvum_PYR-GCK DCGAAKTDFEMVEVARP
MAV_4213|M.avium_104 DCGAAKSDFEMVEVARP
MSMEG_1841|M.smegmatis_MC2_155 DCGAAKSDFDMVEVSRP
MMAR_1293|M.marinum_M DCGAAKADFVMVEVARP
MUL_2594|M.ulcerans_Agy99 DCGAAKADFVMVEVARP
MAB_3597c|M.abscessus_ATCC_199 DCGAAKADFVMVEIARP
******:** ***::*.