For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_4213 (-)

annotation: rubredoxin
coordinates: 4342529 - 4342711
length: 60

SDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCPDCGAAKSDFEMVEVARP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_4213--100% (60)rubredoxin
M. avium 104MAV_4214-2e-1054.35% (46) rubredoxin

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3278crubB2e-3088.14% (59) rubredoxin RubB
M. gilvum PYR-GCKMflv_4719-1e-3498.33% (60) rubredoxin-type Fe(Cys)4 protein
M. tuberculosis H37RvRv3250crubB2e-3088.14% (59) rubredoxin RubB
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3597c-2e-2983.05% (59) rubredoxin RubB
M. marinum MMMAR_1293rubB2e-3190.00% (60) rubredoxin RubB
M. smegmatis MC2 155MSMEG_1841-5e-3290.00% (60) rubredoxin
M. thermoresistible (build 8)TH_0468rubB3e-3191.23% (57) PROBABLE RUBREDOXIN RUBB
M. ulcerans Agy99MUL_2594rubB1e-3190.00% (60) rubredoxin RubB
M. vanbaalenii PYR-1Mvan_1744-2e-3393.33% (60) rubredoxin-type Fe(Cys)4 protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb3278c|M.bovis_AF2122/97           -------MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCP
Rv3250c|M.tuberculosis_H37Rv        -------MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCP
TH_0468|M.thermoresistible__bu      --------VDYKLYMCVQCGFEYDEAKGWPEEGIAPGTRWEDIPDDWSCP
Mvan_1744|M.vanbaalenii_PYR-1       -------MSDYKLFICVQCGFEYDEAKGWPEDGIEPGTRWDDIPDDWSCP
MAV_4213|M.avium_104                -------MSDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCP
Mflv_4719|M.gilvum_PYR-GCK          -------MSDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCP
MSMEG_1841|M.smegmatis_MC2_155      -------MSHYRLFVCVQCGFEYDEAKGWPEDGIAPGTRWEDIPEDWSCP
MMAR_1293|M.marinum_M               -------MSDYKLYQCVQCGFEYDEALGWPEDGIAPGTRWDDIPEDWSCP
MUL_2594|M.ulcerans_Agy99           -------MSDYKLYQCVQCGFEYDEALGWPEDGIAPGTRWDDIPEDWSCP
MAB_3597c|M.abscessus_ATCC_199      MSDETCVDSEYKLYECMQCGFQYDEALGWPEDGIEPGTRWDDIPEDWSCP
                                             .*:*: *:****:**** ****:** .****:***:*****

Mb3278c|M.bovis_AF2122/97           DCGAAKSDFEMVEVARS
Rv3250c|M.tuberculosis_H37Rv        DCGAAKSDFEMVEVARS
TH_0468|M.thermoresistible__bu      DCGAAKSDFEMVEVARS
Mvan_1744|M.vanbaalenii_PYR-1       DCGAAKSDFEMVEVARP
MAV_4213|M.avium_104                DCGAAKSDFEMVEVARP
Mflv_4719|M.gilvum_PYR-GCK          DCGAAKTDFEMVEVARP
MSMEG_1841|M.smegmatis_MC2_155      DCGAAKSDFDMVEVSRP
MMAR_1293|M.marinum_M               DCGAAKADFVMVEVARP
MUL_2594|M.ulcerans_Agy99           DCGAAKADFVMVEVARP
MAB_3597c|M.abscessus_ATCC_199      DCGAAKADFVMVEIARP
                                    ******:** ***::*.