For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSHYRLFVCVQCGFEYDEAKGWPEDGIAPGTRWEDIPEDWSCPDCGAAKSDFDMVEVSRP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1841 | - | - | 100% (60) | rubredoxin |
M. smegmatis MC2 155 | MSMEG_1840 | - | 1e-12 | 48.33% (60) | rubredoxin |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3278c | rubB | 2e-28 | 81.36% (59) | rubredoxin RubB |
M. gilvum PYR-GCK | Mflv_4719 | - | 8e-32 | 88.33% (60) | rubredoxin-type Fe(Cys)4 protein |
M. tuberculosis H37Rv | Rv3250c | rubB | 2e-28 | 81.36% (59) | rubredoxin RubB |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3597c | - | 5e-28 | 77.97% (59) | rubredoxin RubB |
M. marinum M | MMAR_1293 | rubB | 1e-29 | 85.00% (60) | rubredoxin RubB |
M. avium 104 | MAV_4213 | - | 3e-32 | 90.00% (60) | rubredoxin |
M. thermoresistible (build 8) | TH_0468 | rubB | 8e-30 | 87.50% (56) | PROBABLE RUBREDOXIN RUBB |
M. ulcerans Agy99 | MUL_2594 | rubB | 8e-30 | 85.00% (60) | rubredoxin RubB |
M. vanbaalenii PYR-1 | Mvan_1744 | - | 2e-31 | 86.67% (60) | rubredoxin-type Fe(Cys)4 protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3278c|M.bovis_AF2122/97 -------MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCP Rv3250c|M.tuberculosis_H37Rv -------MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCP TH_0468|M.thermoresistible__bu --------VDYKLYMCVQCGFEYDEAKGWPEEGIAPGTRWEDIPDDWSCP Mvan_1744|M.vanbaalenii_PYR-1 -------MSDYKLFICVQCGFEYDEAKGWPEDGIEPGTRWDDIPDDWSCP Mflv_4719|M.gilvum_PYR-GCK -------MSDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCP MAV_4213|M.avium_104 -------MSDYKLFVCVQCGFEYDEAKGWPEDGIAPGTRWDDIPEDWSCP MSMEG_1841|M.smegmatis_MC2_155 -------MSHYRLFVCVQCGFEYDEAKGWPEDGIAPGTRWEDIPEDWSCP MMAR_1293|M.marinum_M -------MSDYKLYQCVQCGFEYDEALGWPEDGIAPGTRWDDIPEDWSCP MUL_2594|M.ulcerans_Agy99 -------MSDYKLYQCVQCGFEYDEALGWPEDGIAPGTRWDDIPEDWSCP MAB_3597c|M.abscessus_ATCC_199 MSDETCVDSEYKLYECMQCGFQYDEALGWPEDGIEPGTRWDDIPEDWSCP .*:*: *:****:**** ****:** .****:***:***** Mb3278c|M.bovis_AF2122/97 DCGAAKSDFEMVEVARS Rv3250c|M.tuberculosis_H37Rv DCGAAKSDFEMVEVARS TH_0468|M.thermoresistible__bu DCGAAKSDFEMVEVARS Mvan_1744|M.vanbaalenii_PYR-1 DCGAAKSDFEMVEVARP Mflv_4719|M.gilvum_PYR-GCK DCGAAKTDFEMVEVARP MAV_4213|M.avium_104 DCGAAKSDFEMVEVARP MSMEG_1841|M.smegmatis_MC2_155 DCGAAKSDFDMVEVSRP MMAR_1293|M.marinum_M DCGAAKADFVMVEVARP MUL_2594|M.ulcerans_Agy99 DCGAAKADFVMVEVARP MAB_3597c|M.abscessus_ATCC_199 DCGAAKADFVMVEIARP ******:** ***::*.