For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NRRISTLVVALAPILIFGILLSAVTVPYVALGPGPTFDTLGEVDGKEVVDIEGADVHATSGHLNMTTVSQ RDGLTLGQALIFWASGRDQLLPRDLVYPPDKTREEIDEANSQDFRQSEDSAEYAALHHLKYPMAVTVESI DEEGPSKGKLQGGDAIDGVNGKPVATLDQFQELLKAYKPGDTIAVDYRRKNAPMGTAEITLGKHPDRDQG ILGVNVLDAPWAPFTIDFNLANIGGPSAGLMFSLAVVDKLTTGDVTGGKFVAGSGTISGDGKVGSIGGIT HKVTAAQEAGATVFLVPADNCAEARTADADGIELLKVETLEQAVDGLRTLSAGGEPPRC*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4655 | - | - | 100% (340) | PDZ/DHR/GLGF |
M. gilvum PYR-GCK | Mflv_3336 | - | 4e-07 | 34.07% (91) | ATP-dependent protease La |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3216c | - | 1e-134 | 67.06% (340) | hypothetical protein Mb3216c |
M. tuberculosis H37Rv | Rv3194c | - | 1e-134 | 67.06% (340) | hypothetical protein Rv3194c |
M. leprae Br4923 | MLBr_00643 | - | 1e-135 | 67.35% (340) | putative secreted protein |
M. abscessus ATCC 19977 | MAB_3499c | - | 1e-135 | 67.06% (340) | hypothetical protein MAB_3499c |
M. marinum M | MMAR_1370 | - | 1e-135 | 67.35% (340) | serine protease |
M. avium 104 | MAV_4138 | - | 1e-138 | 69.41% (340) | PDZ domain-containing protein |
M. smegmatis MC2 155 | MSMEG_1958 | - | 1e-153 | 76.61% (342) | PDZ domain-containing protein |
M. thermoresistible (build 8) | TH_1131 | - | 1e-147 | 72.06% (340) | POSSIBLE CONSERVED SECRETED PROTEIN |
M. ulcerans Agy99 | MUL_2506 | - | 1e-135 | 67.35% (340) | serine protease |
M. vanbaalenii PYR-1 | Mvan_1813 | - | 1e-174 | 87.35% (340) | PDZ/DHR/GLGF |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4655|M.gilvum_PYR-GCK -------------------MNRRISTLVVALAPILIFGILLSAVTVPYVA Mvan_1813|M.vanbaalenii_PYR-1 MNSGGLRGSPRALTSTVGRVNRRISTMVVALVPILVFGVLLTVVTVPYVA MSMEG_1958|M.smegmatis_MC2_155 ----------------MNGVNRRILTLLVALVPVVAFGVLLSVVQVPFVS TH_1131|M.thermoresistible__bu -------------------VNRRILTLIVALVPIMAFGVLLSVVRVPFVS MMAR_1370|M.marinum_M -------------------MNRRILTLMVALVPIVVFGVLLAVVTVPFVS MUL_2506|M.ulcerans_Agy99 -------------------MNRRILTLMVALVPIVVFGVLLAVVTVPFVS MLBr_00643|M.leprae_Br4923 -------------------MNRRILTLLVALVPILVFGVLLAVVTVPFVS MAV_4138|M.avium_104 -------------------MNRRILTLMVALVPIVAFGVLLAVVTVPFVS Mb3216c|M.bovis_AF2122/97 -------------------MNRRILTLMVALVPIVVFGVLLAVVTVPFVA Rv3194c|M.tuberculosis_H37Rv -------------------MNRRILTLMVALVPIVVFGVLLAVVTVPFVA MAB_3499c|M.abscessus_ATCC_199 -------------------MNRRVATLLVALIPIVVFGLLMSVITVPFVS :***: *::*** *:: **:*::.: **:*: Mflv_4655|M.gilvum_PYR-GCK LGPGPTFDTLGEVDGKEVVDIEG--ADVHATSGHLNMTTVSQRDGLTLGQ Mvan_1813|M.vanbaalenii_PYR-1 LGPGPTFDTLGEVDGKQVVDIEG--AHVHKTSGHLNMTTVSQRDGLTLGQ MSMEG_1958|M.smegmatis_MC2_155 LGPGPTFNTLGEIDGKQVVDIEGPDATVHPTSGHLNMTTVSQRDGLTLGQ TH_1131|M.thermoresistible__bu LGPGPTFDTLGQIDGKDVVAIEG--AEVYPTSGQLNMTTVAQRDGLTLGQ MMAR_1370|M.marinum_M LGPGPTFDTLGEVDGRQVVQIEG--TQTHPTTGHLNMTTVSQRDGLSLGE MUL_2506|M.ulcerans_Agy99 LGPGPTFDTLGEVDGKQVVQIEG--TQTHPTTGHLNMTTVSQRDGLSLGE MLBr_00643|M.leprae_Br4923 LGPGPTFDTLGEVDGKQVVAIKG--AHTHPTSGHLNMTTVSQRDDLTLGE MAV_4138|M.avium_104 LGPGPTFDTLGEVDGKQVVAIEG--TMTHPTTGHLNMTTVSQRDDLTLGE Mb3216c|M.bovis_AF2122/97 LGPGPTFDTLGEIDGKQVVQIVG--TQTYPTSGHLNMTTVSQRDGLTLGE Rv3194c|M.tuberculosis_H37Rv LGPGPTFDTLGEIDGKQVVQIVG--TQTYPTSGHLNMTTVSQRDGLTLGE MAB_3499c|M.abscessus_ATCC_199 LGPGPTFNTLGQVEGKEVVDIKG--TKVDPVSGHLNMTTVSQRDGLTLAD *******:***:::*::** * * : . .:*:******:***.*:*.: Mflv_4655|M.gilvum_PYR-GCK ALIFWASGRDQLLPRDLVYPPDKTREEIDEANSQDFRQSEDSAEYAALHH Mvan_1813|M.vanbaalenii_PYR-1 ALVFWASGRDQLVPRELVYPPDKSREEIDEANTRDFRDSEDSAEYAALQY MSMEG_1958|M.smegmatis_MC2_155 AITLWMSGREQLVPRDLVYPPDKSKDEIDEANTADFKNSEDSAEYAALSF TH_1131|M.thermoresistible__bu ALTLWMSGREQLVPRDLVYPPDKSREEIEQANTRDFRQSEDSAEYAALSY MMAR_1370|M.marinum_M ALTLWLSGQEQLVPRDLVYPPGKSREEVDNANSADFKNSEESAEYAALEY MUL_2506|M.ulcerans_Agy99 ALTLWLSGQEQLVPRDLVYPPGKSREEVDNANSADFKNSEESAEYAALEY MLBr_00643|M.leprae_Br4923 ALTLWLSGQEQLVPRDLIYPPGKSREDVDKVNYADFKQSEDSAAYAALGY MAV_4138|M.avium_104 ALTLWLSDTEQLVPRDLIYPPGKSREDVDKANNADFKQSEDSAAYAALGY Mb3216c|M.bovis_AF2122/97 ALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGY Rv3194c|M.tuberculosis_H37Rv ALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGY MAB_3499c|M.abscessus_ATCC_199 ALRLWASGSEQLVPRDVVYPPDRSKDQVDKENDLEFKKSEESAEFAALGY *: :* *. :**:**:::***.:::::::: * :*: ** :* :*** . Mflv_4655|M.gilvum_PYR-GCK LKYPMAVTVESIDEEGPSKGKLQGGDAIDGVNGKPVATLDQFQELLKAYK Mvan_1813|M.vanbaalenii_PYR-1 LKYPMAVTVESIDEKGPSKGKLQAGDAIDAVNNTPVASLAQFQELLKSTK MSMEG_1958|M.smegmatis_MC2_155 LKYPMAVTVQNVTDPGPSAGKLQDGDAIDGVNGKPVANLDEFQALLKETK TH_1131|M.thermoresistible__bu LDYPMAVTVDSVEESGPSAGKLRDGDAIDAVDGRPVANLDEFQAVLQETK MMAR_1370|M.marinum_M LKYPDAVTVATVSEPGPSAGKLKAGDAIDAVNGTAVANVEQFTSILKDTK MUL_2506|M.ulcerans_Agy99 LKYPDAVTVATVSEPGPSAGKLKAGDAIDAVNGTAVANVEQFTSILKDTK MLBr_00643|M.leprae_Br4923 LQYPSAVTVAKVTDPGQSVGKLKSGDAVDAVNGSPVANVEQFTGLLKKTK MAV_4138|M.avium_104 LKYPSAVTVAKVPEPGPSAGKLKVGDAIDAVNGTPVATVEEFTGLLKNTK Mb3216c|M.bovis_AF2122/97 LKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTK Rv3194c|M.tuberculosis_H37Rv LKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTK MAB_3499c|M.abscessus_ATCC_199 LKYPAAVTVLTISDDGPSKGKLQQNDAITAVNGHPVATLDEFTGQLKLTK *.** **** .: : * * .**: .**: .*:. .*..: :* *: * Mflv_4655|M.gilvum_PYR-GCK PGDTIAVDYRRKNAPMGTAEITLGKHPDRDQGILGVNVLDAPWAPFTIDF Mvan_1813|M.vanbaalenii_PYR-1 PGDTIIVDYRRKNAPMGTTEITLGSHPDRPQGVVGVNVLDAPWAPFTIDF MSMEG_1958|M.smegmatis_MC2_155 PGDKLVIDYRRKNAPPGEATITLGDNPDRDYGYLGIAVLDAPWAPFDIEF TH_1131|M.thermoresistible__bu PGDTIVIDYRRKNAPPGAVAVTLGENPDREHGYLGIGVLDAPWAPFEITF MMAR_1370|M.marinum_M PGDVVVIDFRRKNEAPGVAQITLGTNKDRDYGFMGVAVLDAPWAPFVVDF MUL_2506|M.ulcerans_Agy99 PGDVVVIDFRRKNEAPGVAQITLGTNKDRDYGFMGVAVLDAPWAPFVVDF MLBr_00643|M.leprae_Br4923 PGEVVTIDFRRKNEPPGVVQITLGANKDRDYGFLGVAVLDAPWAPFVVDF MAV_4138|M.avium_104 PGQTVTIDYRRKNEPAGVAQITLGANKDRDYGFLGVAVLDAPWAPFVVNF Mb3216c|M.bovis_AF2122/97 PGQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDF Rv3194c|M.tuberculosis_H37Rv PGQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDF MAB_3499c|M.abscessus_ATCC_199 PGDEVMLDYKRKNAPNGTVKITLGKNGDRDYGFLGVGVVQAPWAPFTIDF **: : :*::*** . * . :*** : ** * :*: *::****** : * Mflv_4655|M.gilvum_PYR-GCK NLANIGGPSAGLMFSLAVVDKLTTGDVTGGKFVAGSGTISGDGKVGSIGG Mvan_1813|M.vanbaalenii_PYR-1 NLANIGGPSAGLMFSLAVVDKLTTGDVNGGKFVAGTGTISGDGKVGSIGG MSMEG_1958|M.smegmatis_MC2_155 NLANIGGPSAGLMFSLAVVDKLTTGDLNDGKFIAGTGTISGDGKVGSIGG TH_1131|M.thermoresistible__bu NLANVGGPSAGMVFSLAVIDKLTEGDLAGSRVVAGSGTITGDGQVGSIGG MMAR_1370|M.marinum_M HLANVGGPSAGLMFSLAVVDKLTTGDLVGSTFVAGTGTITADGKVGPIGG MUL_2506|M.ulcerans_Agy99 HLANVGGPSAGLMFSLAVVDKLTTGDLVGSTFVAGTGTITADGKVGPIGG MLBr_00643|M.leprae_Br4923 NLANVGGPSAGLMFSLAVVDKLTTGDLVGSTFVAGTGTISIDGKVGPIGG MAV_4138|M.avium_104 NLANVGGPSAGLMFSLAVVDKLTTGDLAGSNFVAGTGTISADGKVGQIGG Mb3216c|M.bovis_AF2122/97 HLANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGG Rv3194c|M.tuberculosis_H37Rv HLANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGG MAB_3499c|M.abscessus_ATCC_199 NLANIGGPSAGLMFSLAVIDKLTPGELDGGKFVAGTGTIDAEGKVGPIGG :***:******::*****:**** *.: .. .:**:*** :*:** *** Mflv_4655|M.gilvum_PYR-GCK ITHKVTAAQEAGATVFLVPADNCAEARTADADGIELLKVETLEQAVDGLR Mvan_1813|M.vanbaalenii_PYR-1 ITHKIVAARDAGATAFLVPADNCAEAKTADADGIELLKVDTLEHAVDGLR MSMEG_1958|M.smegmatis_MC2_155 ITHKMLAASEAGAEVFLVPADNCTEARSAPRDGLELVKVETLEGAVDALK TH_1131|M.thermoresistible__bu ITHKMAAAADAGATVFLVPAENCVEAKSAQRDGMELVRVETLDDAVTALN MMAR_1370|M.marinum_M ITHKMAAARAAGASVFLVPAKNCYEAASDTPSGLRLVKVETLGQAVDALH MUL_2506|M.ulcerans_Agy99 ITHKMAAARAAGASVFLVPAKNCYEAASDTPSGLRLVKVETLGQAVDALH MLBr_00643|M.leprae_Br4923 IAHKMAAARAAGATVFLVPAKNCYEARSDNRTGLRLVKVESLSQAVDALH MAV_4138|M.avium_104 ITHKMVAAHAAGATVFLVPAKNCYEASSDNPSGLRLVKVETLAQAVDALH Mb3216c|M.bovis_AF2122/97 ITHKMAAARAAGATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALH Rv3194c|M.tuberculosis_H37Rv ITHKMAAARAAGATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALH MAB_3499c|M.abscessus_ATCC_199 ITHKMFAAKDAGATVFLVPAANCAEAKTDGGQGLTLVKVGTLTEAVDGLN *:**: ** *** .***** ** ** : *: *::* :* ** .*. Mflv_4655|M.gilvum_PYR-GCK TLSAGGEPPRC Mvan_1813|M.vanbaalenii_PYR-1 TLSAGGEPPRC MSMEG_1958|M.smegmatis_MC2_155 TISAGGEPPRC TH_1131|M.thermoresistible__bu TLSAGGEPPRC MMAR_1370|M.marinum_M AMTAGTATPSC MUL_2506|M.ulcerans_Agy99 AMTSGTATPSC MLBr_00643|M.leprae_Br4923 AMTSGGQLPSC MAV_4138|M.avium_104 AITAGGQPPSC Mb3216c|M.bovis_AF2122/97 AMTSGSPTPSC Rv3194c|M.tuberculosis_H37Rv AMTSGSPTPSC MAB_3499c|M.abscessus_ATCC_199 ALNRGEQPPSC ::. * * *