For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPKSVLPPERLPSHTTTCMGCGPDNPHGLRLVVHRSGDAVFTDVTFDERHIGAPGLAHGGAVAAACDDVL GFTLWIAGTPAVTRTLTVEYLRPVPLHQTHRITAHIVSREGRALHVTATGTGEGGIARFTASAVFIVVSP EHFAAHGDVSAFGDLLEQFSRRGGLDPGPS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4580 | - | - | 100% (170) | thioesterase superfamily protein |
| M. gilvum PYR-GCK | Mflv_4585 | - | 1e-26 | 45.93% (135) | thioesterase superfamily protein |
| M. gilvum PYR-GCK | Mflv_4570 | - | 3e-11 | 37.86% (103) | thioesterase superfamily protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0563 | - | 1e-10 | 29.41% (102) | hypothetical protein MAB_0563 |
| M. marinum M | MMAR_3145 | - | 6e-09 | 38.75% (80) | hypothetical protein MMAR_3145 |
| M. avium 104 | MAV_3804 | - | 2e-66 | 71.88% (160) | thioesterase family protein |
| M. smegmatis MC2 155 | MSMEG_2866 | - | 1e-07 | 36.45% (107) | thioesterase family protein |
| M. thermoresistible (build 8) | TH_0396 | - | 2e-11 | 34.91% (106) | thioesterase family protein |
| M. ulcerans Agy99 | MUL_4866 | - | 1e-07 | 31.90% (116) | hypothetical protein MUL_4866 |
| M. vanbaalenii PYR-1 | Mvan_0322 | - | 1e-96 | 97.65% (170) | thioesterase superfamily protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4580|M.gilvum_PYR-GCK ------------------------------------MPKSVLPPERLPSH
Mvan_0322|M.vanbaalenii_PYR-1 ------------------------------------MPKSVLPPERLPSH
MAV_3804|M.avium_104 -------------------------------------MMGVDQPQRLPSH
MSMEG_2866|M.smegmatis_MC2_155 MSDPISVADPEHARALYEPLTQSVRRLVDLTIRSEADDDAVRRAHRLVDE
TH_0396|M.thermoresistible__bu MPEQVPVSRAEQDRARYEPLTSSVRRLIDATIRSEADEQAVRQAHALIDQ
MUL_4866|M.ulcerans_Agy99 MSDECPGTDFDRLESVYGPLTASIRRLIDVSIRTQADPATVTASMAKIDS
MMAR_3145|M.marinum_M --------------------------------------------------
MAB_0563|M.abscessus_ATCC_1997 --------------------MSTWMSRSGEDRQHRMLPEGLEPVSRGPQA
Mflv_4580|M.gilvum_PYR-GCK TTTCMG-------------------------CGPDNPHGLRLVVHRSG-D
Mvan_0322|M.vanbaalenii_PYR-1 TTTCMG-------------------------CGPDNPHGLRLVVHRSG-D
MAV_3804|M.avium_104 TPTCMG-------------------------CGSDNPHGLQLEVFRCG-D
MSMEG_2866|M.smegmatis_MC2_155 AAALLGSRVAPGSFGIRSDAAGRPMPWGNVAIGVRNAIAPPLDVHRDSDG
TH_0396|M.thermoresistible__bu AVALLSSRLMPGSFGLRHDTDGNPMVWGNVAIGLRNAIAPPLRVHHQG-G
MUL_4866|M.ulcerans_Agy99 AAEELSDALHPGGFGVQLTPEGETVAWGNVVVGVRNPVAPPLSIHHEPDG
MMAR_3145|M.marinum_M --------------------------------------------------
MAB_0563|M.abscessus_ATCC_1997 PAPGLELN---------------PGWPRRFSHPGTDADLWGTRFFAGAGA
Mflv_4580|M.gilvum_PYR-GCK AVFTDVTFDERHIGAPGLAHGGAVAAACDDVLGFTLWIAGTPAVTRTLTV
Mvan_0322|M.vanbaalenii_PYR-1 AVYSDVTFDERHIGAPGLAHGGAVAAACDDVLGFTLWIAGTPAVTRTLTV
MAV_3804|M.avium_104 EVFADLVFDERHIGAPGLAHGGAIAAACDDVLGFSLWIAATPAVTRRLTV
MSMEG_2866|M.smegmatis_MC2_155 RATADLVLGAPYEGPPGQVHGGVCALVLDHVLGATAHHRHQTAFTGTLTI
TH_0396|M.thermoresistible__bu RAWAEVTLGAPYEGPPGQVHGGVCALLLDHVLGATAHRPGAPAFTGTITL
MUL_4866|M.ulcerans_Agy99 LVWSEFTLGAAYEGPPGHVHGGVCSMILDHVLGATAHLPRRPAYTGTLTL
MMAR_3145|M.marinum_M ------------------------MTVLDDTVGMLLYVVGEMAVTRKLDT
MAB_0563|M.abscessus_ATCC_1997 AVTGQFEVLPELEGGPGVIHGGVMAAIFDELQGILGIVTQLIAVTAHLEI
*. * * * :
Mflv_4580|M.gilvum_PYR-GCK EYLRPVPLHQTHRITAHIVSREGRALHVTATG-TGEGGIARFTASAVFIV
Mvan_0322|M.vanbaalenii_PYR-1 EYLRPVPLHQTHRITAHIVSREGRALHVTATG-TGEGGIARFTASAVFIV
MAV_3804|M.avium_104 DYLQPVPLGCTHRLTARIASREGRALHVDGVG-VGVDGVTRFTASAVFIT
MSMEG_2866|M.smegmatis_MC2_155 RYVRPTWLGA-LRAEAWIDREEGSKTYAVGHL-LGPDGEVTAQAEGVFIR
TH_0396|M.thermoresistible__bu RYLRATPLGVPLRTEAWVDREEGSKTFALGQI-SDHDGVVTVRGEGVFIR
MUL_4866|M.ulcerans_Agy99 RYRRGTVLGRPLRAEGRVERIEGVKTFSVGHI-ADESG-ITVEAEGIFIQ
MMAR_3145|M.marinum_M EFFAPVLLGVPYEVSAELVSRTGRKLEVRTELREEATGQLVASASGLFVV
MAB_0563|M.abscessus_ATCC_1997 DYRKPIPVGSTVDLAAAVEGRTGRKLYTTASA--HIDGELVASSQGIFVI
: : . : * * ...:*:
Mflv_4580|M.gilvum_PYR-GCK VSPEHFAAHGDVSAFGDLLEQFSRRGGLDPGPS--
Mvan_0322|M.vanbaalenii_PYR-1 VSPEHFAAHGDVNAFGDLLEQFSRGGGLDPGPS--
MAV_3804|M.avium_104 VDAAHFAAHGDISGFGELFAELTRYGGAGPDAGSR
MSMEG_2866|M.smegmatis_MC2_155 PRSAR------------------------------
TH_0396|M.thermoresistible__bu PG---------------------------------
MUL_4866|M.ulcerans_Agy99 SKQIRA-----------------------------
MMAR_3145|M.marinum_M VTLDHFTSSIQKASSIRCTARPPWEG---------
MAB_0563|M.abscessus_ATCC_1997 IDPDAHYGEGASRTLGISP----------------