For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AALGYGVSDFVGGIASRRVAALRVVVISYPVALLLLVLAAVPFGGQLSTAAILWGLSAGIVQAFGVWWFY AALGSGPISVVSPLTAILVAGIPVLAGLAFGERPGTLAGVGVVLALIAVVLVSRDSAGDAEAARTGARFT AKVAWLTVGAGVAFGLNFVILHRIPKEAQLWPLVFGRAAAVVVVLIAAVATANLVIERGVPLRLAVLAGG LDTVANIATLVALQSSLLSLAGVLIALYPAATVVLAIAVLRERVSRSQCVGMVLALAAVGMIAAG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4445 | - | - | 100% (276) | hypothetical protein Mflv_4445 |
M. gilvum PYR-GCK | Mflv_0187 | - | 9e-06 | 25.78% (225) | amino acid permease-associated region |
M. gilvum PYR-GCK | Mflv_3133 | - | 7e-05 | 25.91% (247) | hypothetical protein Mflv_3133 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0865 | - | 2e-05 | 30.41% (171) | integral membrane protein |
M. tuberculosis H37Rv | Rv0842 | - | 2e-05 | 30.41% (171) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0415 | - | 1e-28 | 33.46% (272) | hypothetical protein MAB_0415 |
M. marinum M | MMAR_4903 | - | 3e-05 | 23.77% (265) | hypothetical protein MMAR_4903 |
M. avium 104 | MAV_4000 | - | 6e-71 | 58.57% (251) | hypothetical protein MAV_4000 |
M. smegmatis MC2 155 | MSMEG_3416 | - | 2e-32 | 31.34% (284) | protein of unknown function DUF6, transmembrane, putative |
M. thermoresistible (build 8) | TH_3271 | - | 5e-07 | 27.88% (226) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_0503 | - | 2e-05 | 23.77% (265) | hypothetical protein MUL_0503 |
M. vanbaalenii PYR-1 | Mvan_1917 | - | 1e-107 | 78.41% (264) | hypothetical protein Mvan_1917 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4445|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_1917|M.vanbaalenii_PYR-1 -------------------------------------------------- MAV_4000|M.avium_104 -------------------------------------------------- MSMEG_3416|M.smegmatis_MC2_155 -------------------------------------------------- MAB_0415|M.abscessus_ATCC_1997 -------------------------------------------------- MMAR_4903|M.marinum_M -------------------------------------------------- MUL_0503|M.ulcerans_Agy99 ---------------------------------------------MASST Mb0865|M.bovis_AF2122/97 MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVA Rv0842|M.tuberculosis_H37Rv MRYTGPERCSGDGQVRAAGDRYSTVIWLLGGNLLVRSAGFGYPFLAYHVA TH_3271|M.thermoresistible__bu -------------------------------------------------- Mflv_4445|M.gilvum_PYR-GCK --------------MAALGYGVSDFVGGIASRRVAALRVVVIS-YPVALL Mvan_1917|M.vanbaalenii_PYR-1 -------------------------MGGIASRRVAALRVVVVS-YPVALV MAV_4000|M.avium_104 --------------------------------------MMLVA-YPIETL MSMEG_3416|M.smegmatis_MC2_155 ------MIGWLFGLGSAVLYGMSDFVGGLASRRSHFVVVALLG-QCAGLM MAB_0415|M.abscessus_ATCC_1997 ------MNSIPLALAGSLSWGISDFIGGHASKRRSTLAVLALS-RPVGLA MMAR_4903|M.marinum_M --------MPALAMGVTVTLWAFAFVGVRSAGRVFSPGVLALSRLFIAVM MUL_0503|M.ulcerans_Agy99 TSSQRTVNMPALAMGVTVTLWAFAFVGVRSAGRVFSPGVLALSRLFIAVM Mb0865|M.bovis_AF2122/97 GRGHGAGAVGAVVAAYGLGWAVGQLLCGWLVDRVG-ARVTLVSTMLVAAA Rv0842|M.tuberculosis_H37Rv GRGHGAGAVGAVVAAYGLGWAVGQLLCGWLVDRVG-ARVTLVSTMLVAAA TH_3271|M.thermoresistible__bu ------------VLGQGLAVLLAVCAAVFAAVGIVVRQRATMDVPPEKGV : Mflv_4445|M.gilvum_PYR-GCK LLVLAAVPFGGQ-LSTAAILWGLSAG-IVQAFGVWWFYAALGSGPISVVS Mvan_1917|M.vanbaalenii_PYR-1 LLVLAAIPMGGQ-LSTAAVAWGALAG-LVQAFGVWWFYAALGSGPISVVS MAV_4000|M.avium_104 LLGALAIFVGGP-IHPGALLWGGLYG-IGMAFGMWAFFAALGSGPISVVS MSMEG_3416|M.smegmatis_MC2_155 ASALAGLMIGAESIPRSDLWWGALSG-FGTAVGMAFLFRGLSRGAMSVIV MAB_0415|M.abscessus_ATCC_1997 VVGLVSVLTAST-HFDGRTLLGMLSG-PAAFAALYALYRALAIGPMGVVS MMAR_4903|M.marinum_M VMAVIATIAATYTAYAGRATTRRLRPPSAAALTLVIAYGVAWFGAYSIVI MUL_0503|M.ulcerans_Agy99 VMAVIATIAATYTAYAGRATTRRLRPPSAAALTLVIAYGVAWFGAYSIVI Mb0865|M.bovis_AF2122/97 VLVLMAGLHTVPGLLVGAMIAGLVCDAPRPVLGAVIAELVADPQRRAQLD Rv0842|M.tuberculosis_H37Rv VLVLMAGLHTVPGLLVGAMIAGLVCDAPRPVLGAVIAELVADPQRRAQLD TH_3271|M.thermoresistible__bu STVMIATLVRRR-------LWWIGTG--AAVAGYALQAAALAFGSLILVQ . : Mflv_4445|M.gilvum_PYR-GCK ---------PLTAILVAGIPVLAGLAF------GERPGTLAGVGVVLALI Mvan_1917|M.vanbaalenii_PYR-1 ---------PLTAVLVAGIPVLAGVAL------GERPSVVAGVGVVLALV MAV_4000|M.avium_104 ---------PLAAVLNAAVPVAVGMAL------GERPGQAALVGVVLALA MSMEG_3416|M.smegmatis_MC2_155 ---------PVSAVTGVSIPVLFGVVVE-----GQRPSLLAWLGIVVAVP MAB_0415|M.abscessus_ATCC_1997 ---------PIAAVG-AVVPVLWGTVI------GQSLAGLTYLGLGGTLV MMAR_4903|M.marinum_M SWAEQHIDAGTTALLVNLAPILVAVFAG--FFLGEGYSARLLTGIAIAFA MUL_0503|M.ulcerans_Agy99 SWAEQHIDAGTTALLVNLAPILVAVFAG--FFLGEGYSARLLTGIAIAFA Mb0865|M.bovis_AF2122/97 GWRYGWVLNIGAAITGGVGGVVAGWLDTPVLYWINGIGCAIFAGLAGRCI Rv0842|M.tuberculosis_H37Rv GWRYGWVLNIGAAITGGVGGVVAGWLDTPVLYWINGIGCAIFAGLAGRCI TH_3271|M.thermoresistible__bu P--------ILVSALLFALPLSARLGAR----RVSRGEWAWAAVLTVALA : : . : Mflv_4445|M.gilvum_PYR-GCK AVVLVSRDSAGD-----AEAARTGARFTAKVAWLTVGAGVAFGLNFVILH Mvan_1917|M.vanbaalenii_PYR-1 AVVLVSRGAT-------DEDSRP-HRFTAKVAWLTVGSGVAFGMNFVILH MAV_4000|M.avium_104 AVMLVSREAP---------AEGTPYRFTPKVAWLTVVAGSAMGLNLVFLH MSMEG_3416|M.smegmatis_MC2_155 ALWLVAGRQS-----------RNAEGLKGSGVGDGLVAGVGIAVQYLALA MAB_0415|M.abscessus_ATCC_1997 GVMLASASEG-----------LDGQRPGRQVLVWSFFCMVMFGICMILLA MMAR_4903|M.marinum_M GVVLISAGGG-------------GSQTDWLGVGLGLLAAVLYAAGVLLQK MUL_0503|M.ulcerans_Agy99 GVVLISAGGG-------------GSQTDWLGVGLGLLAAVLYAAGVLLQK Mb0865|M.bovis_AF2122/97 PADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLATLTTLMGFF Rv0842|M.tuberculosis_H37Rv PADVCRRTESGLRACTAMSKVGYRQALSDKRLVLLAVSGLATLTTLMGFF TH_3271|M.thermoresistible__bu AFVLIAKPKP----------GDYQASIPGTVVVTVACVAGVTVCVVLAVR : : Mflv_4445|M.gilvum_PYR-GCK RIP-KEAQLWPLVFGRAAAVVVVLIAAVATANLVIERG--VPLRLAVLAG Mvan_1917|M.vanbaalenii_PYR-1 QIP-PEAKLWPLVLGRLVAAAVVLFAALVTANLVFERG--VPLRLAVLAG MAV_4000|M.avium_104 QAP-HACKLWPLVFARVAASLVVFAMAGTSQNLKMPRG--RPLRLAVAVA MSMEG_3416|M.smegmatis_MC2_155 HAS-AASGLWPVAAGRVSAVLVLIVMAIFVMRHLKDEHDRSPLRTTMASG MAB_0415|M.abscessus_ATCC_1997 EAG-RYHPVEAVVVSRATEVVLILILGALSWNNLRENLR-PPFGVVPFAG MMAR_4903|M.marinum_M VALRTVDALSATLWGTLVGFIVTLPFLPAAARELSLASAADLWWLVFLGA MUL_0503|M.ulcerans_Agy99 VALRTVDALSATLWGTLVGFIVTLPFLPAAARELSLASAADLWWLVFLGA Mb0865|M.bovis_AF2122/97 AAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPD Rv0842|M.tuberculosis_H37Rv AAVPMLMSASGLGVGAYGWVQLINALAVVAVTPLLTPWLSKQLALGPRPD TH_3271|M.thermoresistible__bu SLGWRRALLLATAVGVLFGVVAVLTKVWLHKLFTGGVAVGVTSPLLYLLI . Mflv_4445|M.gilvum_PYR-GCK GLDTVANIATLVALQSSLLS-------LAGVLIALYPAATVVLAIAVLRE Mvan_1917|M.vanbaalenii_PYR-1 VLD---NVATLLALQSSMLS-------LAGVLIALYPAATVVLAIVVLRE MAV_4000|M.avium_104 VLDIFANITMLAALHTWLLS-------LASILISLYPAATVVLAMVVLRE MSMEG_3416|M.smegmatis_MC2_155 VLATSAGVLAAAALAAYAIATRHQLAAIAVVLSSMYPVIPVLLGVTVLRE MAB_0415|M.abscessus_ATCC_1997 VLDTSAMLLFAYAAGHGSLA-------VAAVLSSLYPVVTVLIARLVLHE MMAR_4903|M.marinum_M GPSAIAFTTWAYALARTNAG-------VTAATTLMVPALVIALSGLLLAE MUL_0503|M.ulcerans_Agy99 GPSAIAFTTWAYALARTNAG-------VTAATTLMVPALVIALSGLLLAE Mb0865|M.bovis_AF2122/97 ILAGAGVWVTLCMAAAGLARTTVG-FSVAAAACSPGEIAWFVVAAGIVHR Rv0842|M.tuberculosis_H37Rv ILAGAGVWVTLCMAAAGLARTTVG-FSVAAAACSPGEIAWFVVAAGIVHR TH_3271|M.thermoresistible__bu LLGVLATLLQQSAFHAGSLQAS------VPTMLVLEPVVAVALGAAVLGE . . :. :: . Mflv_4445|M.gilvum_PYR-GCK RVSRSQCVG-------MVLALAAVGMIAAG-------------------- Mvan_1917|M.vanbaalenii_PYR-1 RVTRWQALG-------MVLALGSVVMIAAN-------------------- MAV_4000|M.avium_104 RVTRWQGIG-------MVLAMGSVAMIASA-------------------- MSMEG_3416|M.smegmatis_MC2_155 HLTRQQSAG-------LLAAAAATVLLAV--------------------- MAB_0415|M.abscessus_ATCC_1997 RLSRVQQTG-------AVLTLVCVAVVVFSAAR----------------- MMAR_4903|M.marinum_M VPNPLGLAGGGACLIGVALARGLLRLPARSRRRTGTGDQLQGVESLPVGL MUL_0503|M.ulcerans_Agy99 VPNPLGLAGGGACLIGVVLARGLLRLPARSRRRTGTGDQLQGVESLPVGL Mb0865|M.bovis_AF2122/97 IAPPAHGGRYHGIWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGF Rv0842|M.tuberculosis_H37Rv IAPPAHGGRYHGIWSMAVAASSVAAPILAAFNLANGGRLVLAATTVTVGF TH_3271|M.thermoresistible__bu HLDINGWEP-------VPLALAGAAMFAATVALGRNEGAYEERLEVAALA : Mflv_4445|M.gilvum_PYR-GCK -------------------------------- Mvan_1917|M.vanbaalenii_PYR-1 -------------------------------- MAV_4000|M.avium_104 -------------------------------- MSMEG_3416|M.smegmatis_MC2_155 -------------------------------- MAB_0415|M.abscessus_ATCC_1997 -------------------------------- MMAR_4903|M.marinum_M SDYAASSTAPSGRQL----------------- MUL_0503|M.ulcerans_Agy99 SDYAASSTAPSGRQL----------------- Mb0865|M.bovis_AF2122/97 FGAALCLPLARVLAAASCGPLSSKEPSRDSYQ Rv0842|M.tuberculosis_H37Rv FGAALCLPLARVLAAASCGPLSSKEPSRDSYQ TH_3271|M.thermoresistible__bu QQSRSQQVRT----------------------