For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GGGHSHPLYRDGDSPVHRLPAEVKIVCLAAFVLAVVATPRELFWPFGVYALIILAVWRAARIPLRWILPR MLIEAPFLVLAVLLPFSEGGERVSLAGMHLSIAGLYAAWGIVIKGTLGVAASLTVAATTTSRELPVALSR LRVPAMIVSVLTLMIRYIDVLAAEARRMRMARVSRGDSPRMFHQIGATARGVGSLFLRSYERGERVYLAM LSRGFDGHVPALAVGAGSVAAATPRQWVMALLPAAAAVAVAASAWATL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4056 | - | - | 100% (259) | cobalt ABC transporter, inner membrane subunit CbiQ |
M. gilvum PYR-GCK | Mflv_3462 | - | 1e-07 | 28.95% (190) | cobalt transport protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3145 | - | 2e-05 | 23.95% (238) | hypothetical protein MAB_3145 |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2083 | - | 3e-06 | 24.32% (259) | cobalt transport protein |
M. smegmatis MC2 155 | MSMEG_2609 | cbiQ | 1e-112 | 75.39% (256) | cobalt ABC transporter, permease protein CbiQ |
M. thermoresistible (build 8) | TH_3631 | - | 3e-06 | 29.84% (191) | PUTATIVE cobalt transport protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2293 | - | 1e-127 | 88.24% (255) | cobalt ABC transporter, inner membrane subunit CbiQ |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4056|M.gilvum_PYR-GCK ------------MGGGHSHPLYRD----GDSPVHRLPAEVKIVCLAAFVL Mvan_2293|M.vanbaalenii_PYR-1 ------------MGGGHSHPLYRD----GDSPVHRAPAEVKIVCLTVFVL MSMEG_2609|M.smegmatis_MC2_155 ------------MAGGHAHPLYRQ----GDSALHRLAPEVKIVCLVVFVV MAB_3145|M.abscessus_ATCC_1997 ------------MSQR--RPLMLMRPVPGPSPIHALWAGTKLLAVLAISV MAV_2083|M.avium_104 MTAPSDTKSAAGRTRRPPRPVVLLVPVPGTSKIHELWAGTKLLVVLGVSV TH_3631|M.thermoresistible__bu ---------------MSTFGQYQP----GSSPLHRLPAGVKLVALAVSIA * * :* . .*:: : Mflv_4056|M.gilvum_PYR-GCK AVVATPRELFWPFGVYALIILAVWRAARIPLRWILP-RMLIEAPFLVLAV Mvan_2293|M.vanbaalenii_PYR-1 AVVATPRELFWPFGLYGLIILAVWRVARIPLAWILP-RMLIEAPFIVLAL MSMEG_2609|M.smegmatis_MC2_155 AVVATPRETFWPFGVYALIIVSMWAVAKIPPAWVLP-RMLIEAPFLILAV MAB_3145|M.abscessus_ATCC_1997 LLTITP--SWPAIGLVALLILVTAGLAGISPRCIPSVPRWVWLLVVAGSL MAV_2083|M.avium_104 LLTFFP--GWVTVGLMLALLVAAARLAHIPRGALPSPRRWIWIVLAVGGI TH_3631|M.thermoresistible__bu LMAVWVQTPADLAVAALGVAALVAAAGLRPRALTAQLRPVLWVVAVIFGF :. : . . : .. Mflv_4056|M.gilvum_PYR-GCK LLPFSEGGERVSLAGMHLSIAGLYAAWGIVIKGTLGVAASLTVAATTTSR Mvan_2293|M.vanbaalenii_PYR-1 LLPFAEGGERVVVAGMHLSVTGLYAAWGIVVKGTLGVAASLTVAATTTAR MSMEG_2609|M.smegmatis_MC2_155 LLPFAEGGERVEFAGLQLSVTGLYAAWGIVVKGTLGVAASLTVAATTTAR MAB_3145|M.abscessus_ATCC_1997 FTIVNGGAPELKLGPATIGVGGFLDFLRVTSLGLVLIGLGAVISWTTQVA MAV_2083|M.avium_104 TAALGAGSPVVSIAGLHIGLGGTLHFLRVTALSIVLIGLGAMLSWTTNVA TH_3631|M.thermoresistible__bu QLLFTDWRRALVVCGILL----------------LSVVLAAVVTVTTRVT . : . : : : . :: ** Mflv_4056|M.gilvum_PYR-GCK ELPVALSRLRVPAMIVSV--------LTLMIRYIDVLAAEARRMRMAR-- Mvan_2293|M.vanbaalenii_PYR-1 ELPVALSRLRVPAVIVSV--------LTLMIRYIDVLSAEARRMRVAR-- MSMEG_2609|M.smegmatis_MC2_155 ELPLALSRLGVPGTVISM--------LTLMIRYIDVLSTEANRMRMAR-- MAB_3145|M.abscessus_ATCC_1997 DIAPAVALLCRPLRVLRVPVDDWAVTISLAFRMFPMLSEEFRLLAAARRL MAV_2083|M.avium_104 EMGPALATLGRPLRWLRIPSDEWAVALALALRAFPMLIEEFQVLYAARRL TH_3631|M.thermoresistible__bu AMLAALTALMRPLGRVGFPVDQLALALALTLRTIPLMIDTVRQVEEAR-- : *:: * * : . ::* :* : :: . : ** Mflv_4056|M.gilvum_PYR-GCK ----VSRGDSPRMFHQIGATARGVGSLFLRSYERGERVYLAMLSRGFDGH Mvan_2293|M.vanbaalenii_PYR-1 ----ISRGDSPRMLHQIGATATSVGSLFLRSYERGERVYLAMLSRGFDGH MSMEG_2609|M.smegmatis_MC2_155 ----ISRGDSPRGLHQAGAIAKSVGALFLRSYERGERVYLAMLSRGYEGR MAB_3145|M.abscessus_ATCC_1997 QP---PAPEKPSRR---AEVVDLCTAAMVVSLRRATEMGDAITARGGAGR MAV_2083|M.avium_104 RPNQTPRSRRARRRQQARDMIDLLTAAIVVTLRRADEMGDAITARGGIGQ TH_3631|M.thermoresistible__bu -----------RARGLRFSPRIVLAPVITAALDTADGFAEALTARGLD-- . : : . . *: :** Mflv_4056|M.gilvum_PYR-GCK VPALAVGAGSVAAATPRQWVMALLPAAAAVAVAASAWATL- Mvan_2293|M.vanbaalenii_PYR-1 VPALAVGAGCAAPATPRQWTVALLPAAAAVAVAVCALVLS- MSMEG_2609|M.smegmatis_MC2_155 IPELAVGAGSAAAATPRQWLVAAVPVSAAVLVAATAWGLR- MAB_3145|M.abscessus_ATCC_1997 ISAHTVYPGWRDAIA-----AAVLVGVVTLAVVLG------ MAV_2083|M.avium_104 LSAAPARPKLADWVT-----LAITVAAGAIGVALDSMIPFQ TH_3631|M.thermoresistible__bu -----------------------------------------