For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TADTREQSNHADLDLVVRGERMLTTAGIVAREIGIRDGRIVAIEPLGSGLPGAEIVELTDEQVMIPGLVD THVHVNEPGRTEWEGFDSATRAAAAGGVTTLIDMPLNSIPPTVNVDALNAKREAASGKLHIDVGFWGGAI PGNTGDLRGLHDDGVFGFKCFLLHSGVDEFPHLDADEMEEDMRVLVGFDSMMIVHAEDSRAIDHAPTAEG DRYSRFLASRPRGAENVAIAEVIERARWTGARAHILHLSSSDALPMIATAKRDGVRITVETCPHYLTLLA EEIPNGATAFKCCPPIREASNRELLWQGLIDGTIDCIVSDHSPSTIDLKDVENGDFGVAWGGVASLQLGL SLIWTEAKRRGVALTRVIDWMAAKPAELAGLNNKGKIALGYDADFAIFEPESAQVVDVHKLHHRNPITPY DGRAVAGVVASTWLRGTKIDFTTPRGRMLRRGGV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3169 | - | - | 100% (455) | allantoinase |
M. gilvum PYR-GCK | Mflv_3746 | pyrC | 1e-41 | 31.78% (428) | dihydroorotase |
M. gilvum PYR-GCK | Mflv_3352 | ureC | 1e-05 | 35.00% (100) | urease subunit alpha |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1416 | pyrC | 4e-38 | 29.86% (422) | dihydroorotase |
M. tuberculosis H37Rv | Rv1381 | pyrC | 3e-38 | 29.86% (422) | dihydroorotase |
M. leprae Br4923 | MLBr_00533 | pyrC | 6e-40 | 30.27% (413) | dihydroorotase |
M. abscessus ATCC 19977 | MAB_2817c | - | 1e-40 | 29.42% (452) | phenylhydantoinase |
M. marinum M | MMAR_2196 | pyrC | 5e-39 | 31.19% (404) | dihydroorotase PyrC |
M. avium 104 | MAV_3392 | pyrC | 9e-41 | 29.80% (443) | dihydroorotase |
M. smegmatis MC2 155 | MSMEG_4012 | hydA | 6e-44 | 31.64% (452) | dihydropyrimidinase |
M. thermoresistible (build 8) | TH_0815 | pyrC | 2e-09 | 30.00% (130) | PROBABLE DIHYDROOROTASE PYRC (DHOase) |
M. ulcerans Agy99 | MUL_1781 | pyrC | 2e-38 | 30.94% (404) | dihydroorotase |
M. vanbaalenii PYR-1 | Mvan_2661 | pyrC | 1e-37 | 29.34% (426) | dihydroorotase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2196|M.marinum_M -MS------------VLLRGVRLYGEGER--VDVLVDDNQIADIGTG--- MUL_1781|M.ulcerans_Agy99 -MS------------VLLRGVRLYGEGER--VDVLVDDNQIADIGTG--- Mb1416|M.bovis_AF2122/97 -MS------------VLIRGVRPYGEGER--VDVLVDDGQIAQIGPD--- Rv1381|M.tuberculosis_H37Rv -MS------------VLIRGVRPYGEGER--VDVLVDDGQIAQIGPD--- MLBr_00533|M.leprae_Br4923 -MS------------VLLRGVRLYGEGEQ--VDVLVEGEQIANIGAG--- MAV_3392|M.avium_104 -MS------------VLLRGVRLYGEGDR--VDVLVDDGQIADIGAG--- Mvan_2661|M.vanbaalenii_PYR-1 -MTSSSPESLRSCPPIVLKSVRLYGEGDP--VDVLVRDGQIAEIGER--- TH_0815|M.thermoresistible__bu -------------------------------------------------- MAB_2817c|M.abscessus_ATCC_199 -MAT-----------TLIRGGTVVSATGRGAADVLVDGATIAAVLLPGST MSMEG_4012|M.smegmatis_MC2_155 -MVT-----------TLIRGGTVVSATGRQSIDVLIDGATIAALIEPGAA Mflv_3169|M.gilvum_PYR-GCK MTADTREQSNHADLDLVVRGERMLTTAGIVAREIGIRDGRIVAIEPLG-- MMAR_2196|M.marinum_M ----LAIPDTADVIDATDHVLLPGLVDLHTHLREP--GREYAEDIETGSA MUL_1781|M.ulcerans_Agy99 ----LAIPDTADVIDATDHVLLPGLVDLHTHLREP--GREYAEDIETGSA Mb1416|M.bovis_AF2122/97 ----LAIPDTADVIDATGHVLLPGFVDLHTHLREP--GREYAEDIETGSA Rv1381|M.tuberculosis_H37Rv ----LAIPDTADVIDATGHVLLPGFVDLHTHLREP--GREYAEDIETGSA MLBr_00533|M.leprae_Br4923 ----IDIPDTADVIDAIDQVLLPGLVDLHTHLREP--GREYAEDIETGSA MAV_3392|M.avium_104 ----LDIPDTADVIDATGQVLLPGFVDLHTHLREP--GREYAEDIETGSA Mvan_2661|M.vanbaalenii_PYR-1 ----LTAPTDADSIDCEGKILLPGFVDLHTHLREP--GREYAEDIETGSA TH_0815|M.thermoresistible__bu -------------------------------------------------- MAB_2817c|M.abscessus_ATCC_199 LLGMDLAKTVDTVIEAHGKYVIPGGIDAHTHMSMPFGGTTASDDFETGTR MSMEG_4012|M.smegmatis_MC2_155 PFGDGLAERVDNVVDATGKYVIPGGVDAHTHMQMPFGGTTASDTFETGTR Mflv_3169|M.gilvum_PYR-GCK ----SGLPGAEIVELTDEQVMIPGLVDTHVHVNEP--GRTEWEGFDSATR MMAR_2196|M.marinum_M AAALGGYTAVFAMANTHPVADSPVVTDHVWHRGQQVGLVDVHPVGAVTVG MUL_1781|M.ulcerans_Agy99 AAALGGYTAVFAMANTHPVADSPVVTDHVWHRGQQVGLVDVHPVGAVTIG Mb1416|M.bovis_AF2122/97 AAALGGYTAVFAMANTNPVADSPVVTDHVWHRGQQVGLVDVHPVGAVTVG Rv1381|M.tuberculosis_H37Rv AAALGGYTAVFAMANTNPVADSPVVTDHVWHRGQQVGLVDVHPVGAVTVG MLBr_00533|M.leprae_Br4923 AAALGGYTAVFAMPNTTPVADSPVVTDHVWRRGQQVGLVDVHPVGAVTVG MAV_3392|M.avium_104 AAALGGYTAVFAMANTNPVADSPVVTDHVWHRGQQVGLVDVHPVGAVTMG Mvan_2661|M.vanbaalenii_PYR-1 AAALGGYTAVFAMANTDPVADSAVVTDHVWHRGQQVGLVDVHPVGAVTVG TH_0815|M.thermoresistible__bu -------------------------------------------------- MAB_2817c|M.abscessus_ATCC_199 AAAWGGTTTIIDFA-VQKFGERLQDSLDTWHEMAAGQCAIDYSFHQIVGD MSMEG_4012|M.smegmatis_MC2_155 AAALGGTTTIVDFA-IQTPGEHVQDTLQAWHEKAAGNCAIDYGFHQIIGD Mflv_3169|M.gilvum_PYR-GCK AAAAGGVTTLIDMPLNSIPPTVNVDALNAKREAASGKLHIDVGFWGGAIP MMAR_2196|M.marinum_M LAGTELTEMG-MMNAGVAAVRMFSDD-GICVHDPLIMRRALEYATGLGVL MUL_1781|M.ulcerans_Agy99 LAGTELTEMG-MMNAGVAAVRMFSDD-GICVHDPLIMRRALEYATGLGVL Mb1416|M.bovis_AF2122/97 LAGAELTEMG-MMNAGAAQVRMFSDD-GVCVHDPLIMRRALEYATGLGVL Rv1381|M.tuberculosis_H37Rv LAGAELTEMG-MMNAGAAQVRMFSDD-GVCVHDPLIMRRALEYATGLGVL MLBr_00533|M.leprae_Br4923 LAGAELTEMG-MMAAGAAQVRIFSDD-GNCVHNPLVMRRALEYATGLGVL MAV_3392|M.avium_104 LAGKELTEMG-MMAAGAAQVRMFSDD-GVCVHDPLVMRRALEYATGLGVL Mvan_2661|M.vanbaalenii_PYR-1 LDGKQLTEMG-LMAAGAGQVRMFSDD-GVCVDDPLVMRRALEYASGLGVL TH_0815|M.thermoresistible__bu -------------------------------------------------- MAB_2817c|M.abscessus_ATCC_199 VNDASLAALRRLTDEGITSYKMFMAYPGVFYSDDAQIVRAMQVGAATGLM MSMEG_4012|M.smegmatis_MC2_155 VNTESLAAMGELIDEGVTSFKLFMAYPGVYYSTDGQILRAMQKCAEIGGL Mflv_3169|M.gilvum_PYR-GCK GNTGDLRGLHDDGVFGFKCFLLHSGVDEFPHLDADEMEEDMRVLVGFDSM MMAR_2196|M.marinum_M IAQHAEEP---RLTVGAVAHEGPNAAQLGLAGWPRAAEESIVARDALLAR MUL_1781|M.ulcerans_Agy99 IAQHAEEP---RLTVGAVAHEGPSAAQLGLAGWPRAAEESIVARDALLTR Mb1416|M.bovis_AF2122/97 IAQHAEEP---RLTVGAFAHEGPMAARLGLAGWPRAAEESIVARDALLAR Rv1381|M.tuberculosis_H37Rv IAQHAEEP---RLTVGAVAHEGPMAARLGLAGWPRAAEESIVARDALLAR MLBr_00533|M.leprae_Br4923 IAQHAEEP---RLTVGAVAHEGPTAARLGLSGWPRAAEESIVARDALLAR MAV_3392|M.avium_104 IAQHAEEP---RLTVGAVAHEGPTAARLGLAGWPRAAEESIVARDALLAR Mvan_2661|M.vanbaalenii_PYR-1 IAQHAEEP---RLTVGAVAHEGPNAARLGLAGWPRAAEESIVARDALLAR TH_0815|M.thermoresistible__bu -------------------------------------------------- MAB_2817c|M.abscessus_ATCC_199 TMMHAENGPAIDVLVAQLLAEGKTDPYYHGIARAWQLEEEATHRAIMLSN MSMEG_4012|M.smegmatis_MC2_155 MMMHAENGIAIDELVAQHLGRGETGPYFHGVSRPWQLEEEATHRAIMLAD Mflv_3169|M.gilvum_PYR-GCK MIVHAEDS---RAIDHAPTAEGDRYSRFLAS-RPRGAENVAIAEVIERAR MMAR_2196|M.marinum_M DAGARVHICHASTVGTVEILKWAKSQGISITAEVTPHHLLL---DDRRLS MUL_1781|M.ulcerans_Agy99 DAGARVHICHASTVGTVEILKWAKSQGISITAEVTPHHLLL---DDRRLS Mb1416|M.bovis_AF2122/97 DAGARVHICHASAAGTVEILKWAKDQGISITAEVTPHHLLL---DDARLA Rv1381|M.tuberculosis_H37Rv DAGARVHICHASAAGTVEILKWAKDQGISITAEVTPHHLLL---DDARLA MLBr_00533|M.leprae_Br4923 DAGARVHICHASTAGTVEILKWAKEQGISITAEVTPHHLLL---DDSRLA MAV_3392|M.avium_104 DAGARVHICHASTAGTVEIVKWAKQQGISITAEVTPHHLML---DDSRLA Mvan_2661|M.vanbaalenii_PYR-1 DAGARVHICHASTAGTVELLKWAKSQGISITAEVTPHHLLL---DDSRLD TH_0815|M.thermoresistible__bu -------------------------------------------------- MAB_2817c|M.abscessus_ATCC_199 LTGAPLYVVHVSAKQAVAQLAAARDAGQNVYGETCPQYLYLSLEDNLGAP MSMEG_4012|M.smegmatis_MC2_155 VTGAPLYVVHVSAHQALEQIATARGAGGNVFAETCPQYLYLSLEEQLGAG Mflv_3169|M.gilvum_PYR-GCK WTGARAHILHLSSSDALPMIATAKRDGVRITVETCPHYLTL----LAEEI MMAR_2196|M.marinum_M GYDGVNRVN-PPLREASD--AMALRQALADGIIDCVATDHAPHAEHEK-- MUL_1781|M.ulcerans_Agy99 GYDGVNRVN-PPLREASD--AMALRQALADGIIDCVATDHAPHAEHEK-- Mb1416|M.bovis_AF2122/97 SYDGVNRVN-PPLREASD--AVALRQALADGIIDCVATDHAPHAEHEK-- Rv1381|M.tuberculosis_H37Rv SYDGVNRVN-PPLREASD--AVALRQALADGIIDCVATDHAPHAEHEK-- MLBr_00533|M.leprae_Br4923 SYDGVNRVN-PPLRETAD--AVALRQALADGIIDCVTTDHAPHADHEK-- MAV_3392|M.avium_104 SYDGRNRVN-PPLREAAD--AAALRRALADGVIDCVATDHAPHAEHEK-- Mvan_2661|M.vanbaalenii_PYR-1 TYDGVNRVN-PPLREVSD--AVALRRALADGVIDCVATDHAPHGAHEK-- TH_0815|M.thermoresistible__bu -------------------------------VIDCVATDHAPHAEHEK-- MAB_2817c|M.abscessus_ATCC_199 GFDGAKWVCSTPLRAKHEHHQDEMWRALRTNDIQMVSTDHCPFCMKGQKD MSMEG_4012|M.smegmatis_MC2_155 GFEGAKWVCSTPLRARSEGHQDQLWRYIRTGDVAGVATDHCPFCMVGQKE Mflv_3169|M.gilvum_PYR-GCK PNGATAFKCCPPIREASN--RELLWQGLIDGTIDCIVSDHSPSTIDLKDV : : :**.* : MMAR_2196|M.marinum_M --CVEFSAARPGMLGLQTALSVVVQTMVQPGLLSWRDVARVMSENPARIV MUL_1781|M.ulcerans_Agy99 --CVEFSAARPGMLGLQTALSVVVQTMVQPGLLSWRDVARVMSENPARIV Mb1416|M.bovis_AF2122/97 --CVEFAAARPGMLGLQTALSVVVQTMVAPGLLSWRDIARVMSENPACIA Rv1381|M.tuberculosis_H37Rv --CVEFAAARPGMLGLQTALSVVVQTMVAPGLLSWRDIARVMSENPACIA MLBr_00533|M.leprae_Br4923 --CVEFSAARPGMLGLQTALSVVVHTMVVPGLLSWRDVAQVMSENPARIA MAV_3392|M.avium_104 --CVEFSAARPGMLGLQTALSIVVHTMVRPGLLTWRDVAKVMSENPARIA Mvan_2661|M.vanbaalenii_PYR-1 --CCEFANARPGMLGLQTALSVVVETLVNPGLLTWRDVARVMSEAPARIV TH_0815|M.thermoresistible__bu --MCEFAAARPGMLGLQTALSVVVQTMVTPGLLDWRGVARVMSENPARIV MAB_2817c|M.abscessus_ATCC_199 MGIGDFSKIPNGIGSIEHRMDLLYQGVVD-GRISVERWVEITSTTPARMF MSMEG_4012|M.smegmatis_MC2_155 LGIGNFSKIPNGIGGVEHRMDLMFQGVVD-GRISLERWVEVCATTPARMF Mflv_3169|M.gilvum_PYR-GCK E-NGDFGVAWGGVASLQLGLSLIWTEAKRRGVALTR-VIDWMAAKPAELA :*. *: .:: :.:: * . : ** : MMAR_2196|M.marinum_M GLPDHGRPLEVGEPANLTVIDPDATWTV-TGADLASRSANTPYESMTLPA MUL_1781|M.ulcerans_Agy99 GLPDHGRPLEVGEPANLTVIDPDATWTV-TGADLASRSANTPYESMTLPA Mb1416|M.bovis_AF2122/97 RLPDQGRPLEVGEPANLTVVDPDATWTV-TGADLASRSANTPFESMSLPA Rv1381|M.tuberculosis_H37Rv RLPDQGRPLEVGEPANLTVVDPDATWTV-TGADLASRSANTPFESMSLPA MLBr_00533|M.leprae_Br4923 GLPDHGRPLEVGEPANLTVVDPDVTWTV-TGDGLASRSANTPYEAMTLPA MAV_3392|M.avium_104 NLPDHGRPLEVGEPANLTVVDPDASWTV-AGSDLASRSANTPYEAMTLPA Mvan_2661|M.vanbaalenii_PYR-1 GLPDQGRPLEVGEPANLTVVDPAARWTV-KGPELASRSDNTPYEDMELPA TH_0815|M.thermoresistible__bu GLPDQGRPLEVGEPANLTVVDPDASWVV-EGSGLASRSANTPYESMTLPA MAB_2817c|M.abscessus_ATCC_199 GLYGRKGVIAPGADADIVVYDPNGHTSIGLGKTHHMNMDHSAWEGYEIDG MSMEG_4012|M.smegmatis_MC2_155 GLYPRKGVISPGADADVVIYDPAGHTSIGVGKTHHMNMDHSAWEGFEIDG Mflv_3169|M.gilvum_PYR-GCK GLNNKGK-IALGYDADFAIFEPESAQVVDVHKLHHRN-PITPYDGRAVAG * : : * *:..: :* : . :.:: : . MMAR_2196|M.marinum_M RVTATLLRGKITARDGKSPA----------------- MUL_1781|M.ulcerans_Agy99 RVTATLLRGKITARDGKSPA----------------- Mb1416|M.bovis_AF2122/97 TVTATLLRGKVTARDGKIRA----------------- Rv1381|M.tuberculosis_H37Rv TVTATLLRGKVTARDGKIRA----------------- MLBr_00533|M.leprae_Br4923 TVTATLLRGKVTARGQKSPV----------------- MAV_3392|M.avium_104 TVTATLLRGKVTARDGKCPV----------------- Mvan_2661|M.vanbaalenii_PYR-1 VVTATLLRGKVTARDGKVGA----------------- TH_0815|M.thermoresistible__bu TVTLTMLRGKITARDGKAATS---------------- MAB_2817c|M.abscessus_ATCC_199 HVDTVLSRGKVIVDGDEYLGSKGDGVFLRRDLCQYLI MSMEG_4012|M.smegmatis_MC2_155 AVTAVWSRGKKVVEDRRYLGAKTDGRFVRRELSQNLI Mflv_3169|M.gilvum_PYR-GCK VVASTWLRGTKIDFTTPRGRMLRRGGV---------- * . **.