For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KEFSDGSSGVARVPVIDASVHIFCQSNKDLRKNFLREPFRSRGFPDYEMDWYGAPGGEYAPRTEGPDGQY PGSDPELVAKHLFTDRGVDLAILHPMTRGIMPDRHLGTAIASAHNEMMVTRWLDHPEFGERFRGTLRVNP DDIAGALREIDKYRDHPRIVQLGIPLQSREVYGKPQFWPLWEAAVDAGWPVAVHFEVGSGVALPPTPNGL TRTYEQYVGFTALNFLYHLMNMIAEGVFERMPDLKFVWADGAADLLTPFMWRMDCFGRPHLEQTPWAPRM PSDYLPGHVFFVQGALDGPGDVDFAGEWAGFTGKDDMVMYGSSYPHWQLNELTVPGSYDPEQRDKLCWRN AAQLYGIQSPAISVPAAAQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2490 | - | - | 100% (370) | amidohydrolase 2 |
M. gilvum PYR-GCK | Mflv_2489 | - | 2e-34 | 29.23% (349) | amidohydrolase 2 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4724 | - | 1e-169 | 74.04% (366) | metal-dependent hydrolase |
M. avium 104 | MAV_0930 | - | 1e-172 | 75.68% (370) | amidohydrolase family protein |
M. smegmatis MC2 155 | MSMEG_4807 | - | 0.0 | 80.86% (350) | amidohydrolase family protein |
M. thermoresistible (build 8) | TH_4618 | - | 0.0 | 82.16% (370) | PUTATIVE amidohydrolase 2 |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4164 | - | 0.0 | 87.00% (377) | amidohydrolase 2 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2490|M.gilvum_PYR-GCK -MKEFSDGSSG----VARVPVIDASVHIFCQSNKDLRKNFLREPFRSRGF Mvan_4164|M.vanbaalenii_PYR-1 -MKVLSDGSAGALEAQVKVPVIDASVHIFCQSNKDLRRNFLQEPFRSRGF MSMEG_4807|M.smegmatis_MC2_155 -------------------------MHIFFGSNKDLRQNFLREPFASRGF TH_4618|M.thermoresistible__bu -VIELSDG--------TRTPVIDASVHIFCKSNKDLRGTFLREPFKSRGF MMAR_4724|M.marinum_M MVIEHADG--------TRMPVIDASVHIFFPSNKDLR-SFLREPFKSRGF MAV_0930|M.avium_104 -MIEHADG--------TRTPVIDASVHIFFPSNKDLR-SFLREPFKSRGF :*** ****** .**:*** **** Mflv_2490|M.gilvum_PYR-GCK PDYEMDWYGAPGGEYAPRTEGPDGQYPGSDPELVAKHLFTDRGVDLAILH Mvan_4164|M.vanbaalenii_PYR-1 PDYEMDWYGAPGGEYAERTTGPDDQYPGSDPEVVAKHLFTDRGVDIAVLH MSMEG_4807|M.smegmatis_MC2_155 PDYEMNWYGAPGGEYAKNTKGPDRQYPGSDPDVAAQHLFTERGVDIAILH TH_4618|M.thermoresistible__bu PDYEMDWYGAPGGEYAKGTEGPDRQYPGSDPDVVAQHLFEQRGVDIAVLH MMAR_4724|M.marinum_M PDYEMDWYGAPGSEYAPNTEGPDRQYPGSDPKFVADELFSRRGVDVAVLH MAV_0930|M.avium_104 PDYEMDWYGAPGSEYAPNTDGPDGQYPGSDPEFVAQELFSKRGVDVAVLH *****:******.*** * *** *******...*..** ****:*:** Mflv_2490|M.gilvum_PYR-GCK PMTRGIMPDRHLGTAIASAHNEMMVTRWLDHPEFGERFRGTLRVNPDDIA Mvan_4164|M.vanbaalenii_PYR-1 PMTRGIMPDRHLGTALAAAHNEMMVTRWLDHPQLGEKFRGTLRVNPDDIA MSMEG_4807|M.smegmatis_MC2_155 PMTRGIMPDRHLGTALANAHNEMMVTRWLDHERYGERFRGTIRVNPDDIA TH_4618|M.thermoresistible__bu PMTRGIMPDRHLGTALAAAHNEMLVTRWLDHPEFGDRFRGTIRVNPDDIA MMAR_4724|M.marinum_M PMGRGIMPDRHLGSALHAAHNEMMVSRWLEHDEFGDRFRGTIRVNPDDIA MAV_0930|M.avium_104 PMGRGIMPDRHLGSALHAAHNEMMVSRWLDSPEFGEKFRGTIRVNPDDIA ** **********:*: *****:*:***: . *::****:******** Mflv_2490|M.gilvum_PYR-GCK GALREIDKYRDHPRIVQLGIPLQSREVYGKPQFWPLWEAAVDAGWPVAVH Mvan_4164|M.vanbaalenii_PYR-1 GALREIDKYKSHPRIVQLGIPLQSRELYGKPQYWPLWEAAVDAGWPVAVH MSMEG_4807|M.smegmatis_MC2_155 GALREIERFKDHPRVVQIGVPLQSRELYGKPQYWPLWEAASDAGLPVAVH TH_4618|M.thermoresistible__bu GSLREIEKYKDHPRVVQLGIPLQSRELYGKPQFWPLWEAAVAANLPVAVH MMAR_4724|M.marinum_M GAVREVAKWRAHPRVVQIGVPLQSRELYGKPQFWPLWEAAVEAGLPVAVH MAV_0930|M.avium_104 GALRELERWRSHPRVVQLGIPLQSRELYGKPQFWPLWEAAADANLPVAVH *::**: ::: ***:**:*:******:*****:******* *. ***** Mflv_2490|M.gilvum_PYR-GCK FEVGSGVALPPTPNGLTRTYEQYVGFTALNFLYHLMNMIAEGVFERMPDL Mvan_4164|M.vanbaalenii_PYR-1 FEVGSGVQLPPTPSGLTRTYEQFVGFTALNFLYHLMNMIAEGVFERMPAL MSMEG_4807|M.smegmatis_MC2_155 IEVGAGVQFAPTPSGKTRTYEQYLGFMALNYLYHLMNMIAEGVFERMPAL TH_4618|M.thermoresistible__bu IEVGAGIAASPTPSGNTRTYEQYVGFMALNYLYHLMNMIAEGVFERMPTL MMAR_4724|M.marinum_M IESGEGIGFPPTPSGHTRTYEQYVSFMALNYLYHLMNMIAEGVFERFAEL MAV_0930|M.avium_104 IETGEGIGFPPTPSGHTQTYEQYVSFMALNYLYHLMNMIAEGVFERFPAL :* * *: .***.* *:****::.* ***:***************:. * Mflv_2490|M.gilvum_PYR-GCK KFVWADGAADLLTPFMWRMDCFGRPHLEQTPWAPRMPSDYLPGHVFFVQG Mvan_4164|M.vanbaalenii_PYR-1 KFVWADGAADMLTPFIWRMDCFGRPHLEQTPWAPRIPSDYLPDHVYFVQG MSMEG_4807|M.smegmatis_MC2_155 KFVWADGAADLLTPFIWRMDCFGRPHLEQTPWAPKMPSDYLPGHVYFVQG TH_4618|M.thermoresistible__bu KFVWADGAADLLTPFIWRMDCFGRPHLEQTPWAPRMPSDYLPGHVYFVQG MMAR_4724|M.marinum_M KFIWADGAADFVTPFIWRMDTFGRPHLEQTPWAPRIPSDYLPGHVYFIQG MAV_0930|M.avium_104 KFVWADGAADFLTPFIWRMDTFGRPHLEQTPWAPRIPSDYIPGHVYFVQG **:*******::***:**** *************::****:*.**:*:** Mflv_2490|M.gilvum_PYR-GCK ALDGPGDVDFAGEWAGFTGKDDMVMYGSSYPHWQL----NELTVPGSYDP Mvan_4164|M.vanbaalenii_PYR-1 ALDGPGDVDFAGEWAGFTGKDDMVMYGSSYPHWQL----NELSVPTAYTP MSMEG_4807|M.smegmatis_MC2_155 ALDGPGDVEFAGEWFGFTGKENMVMFGSSYPHWQL----NEPEVPTAFTP TH_4618|M.thermoresistible__bu FLDGPGDVDFAGEWFGFTGKENMVMFGSSYPHWQL----NELTIPGTFSA MMAR_4724|M.marinum_M GLDGPGDVEFADEWLSFTGKEDMVMFGSSYPHWQCYDLRDVRNLPTALTA MAV_0930|M.avium_104 SLDGPGDADFAAEWFGFTGKEDMVMFGSSYPHWQC---ADVHKLPPALSA ******.:** ** .****::***:******** : :* : . Mflv_2490|M.gilvum_PYR-GCK EQRDKLCWRNAAQLYGIQS---PAISVPAAAQ Mvan_4164|M.vanbaalenii_PYR-1 DQRDKLCWRNAAALYGIESPVIPAVSTTAAAQ MSMEG_4807|M.smegmatis_MC2_155 EQRDKLLWRNAAELYGLQS---ALTSTAGAAR TH_4618|M.thermoresistible__bu EQRDKLCWRNAAELYNIES---SAIPSAALAK MMAR_4724|M.marinum_M DQREKLCWRNAAELYGIDI------SAELTSG MAV_0930|M.avium_104 EQREKLCWRTAADLYGIDI------SVDLAAS :**:** **.** **.:: . :