For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_2316 (-)

annotation: F0F1 ATP synthase subunit alpha
coordinates: 2407404 - 2409050
length: 548

MAELIISASDIEGAIEDYVSSFTADSEREEIGTVIDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLD
EHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGQGDIESDTRRALELQAPSVV
QRQGVSEPLQTGIKAIDSQTPIGRGQRQLIIGDRKTGKTAVAVDTILNQRKAWETGDPKQQVRCVYVAIG
QKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAPYTGSAIGQHWMYDGKHVLIVFDDLSKQADA
YRAISLLLRRPPGREAFPGDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQYRELESFAAFASDLDAASKAQ
LDRGARLVELLKQPQYTPYSVEDQVVAIFLGTKGHLDSVPVEDVSRFEQEVLEHVKASHDDILQEIRETK
KLSESTEEKLTNVINDFKKGFSASDGSSVVVNEADAEAMDEADVEKESVKVRKPAPKK
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_2316--100% (548)F0F1 ATP synthase subunit alpha
M. gilvum PYR-GCKMflv_2318-3e-2023.30% (412) F0F1 ATP synthase subunit beta

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1340atpA0.083.39% (548) F0F1 ATP synthase subunit alpha
M. tuberculosis H37RvRv1308atpA0.083.39% (548) F0F1 ATP synthase subunit alpha
M. leprae Br4923MLBr_01143atpA0.081.20% (548) F0F1 ATP synthase subunit alpha
M. abscessus ATCC 19977MAB_1451-0.084.12% (548) F0F1 ATP synthase subunit alpha
M. marinum MMMAR_4089atpA0.085.58% (548) ATP synthase alpha chain AtpA
M. avium 104MAV_1525atpA0.085.77% (548) F0F1 ATP synthase subunit alpha
M. smegmatis MC2 155MSMEG_4938atpA0.092.34% (548) F0F1 ATP synthase subunit alpha
M. thermoresistible (build 8)TH_1560atpA0.084.49% (548) ATP synthase F1, alpha subunit
M. ulcerans Agy99MUL_3956atpA0.085.04% (548) F0F1 ATP synthase subunit alpha
M. vanbaalenii PYR-1Mvan_4330-0.094.71% (548) F0F1 ATP synthase subunit alpha

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2316|M.gilvum_PYR-GCK          MAELIISASDIEGAIEDYVSSFTADSEREEIGTVIDAGDGIAHVEGLPSV
Mvan_4330|M.vanbaalenii_PYR-1       MAELTISASDIEGAIEDYVSSFTADSGREEIGVVIDAGDGIAHVEGLPSV
MSMEG_4938|M.smegmatis_MC2_155      MAELTISAADIEGAIEDYVSSFSADTEREEIGTVIDAGDGIAHVEGLPSV
MMAR_4089|M.marinum_M               MAELTISANDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSV
MUL_3956|M.ulcerans_Agy99           MAELTISANDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSV
MAV_1525|M.avium_104                MAELTISADDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSV
Mb1340|M.bovis_AF2122/97            MAELTIPADDIQSAIEEYVSSFTADTSREEVGTVVDAGDGIAHVEGLPSV
Rv1308|M.tuberculosis_H37Rv         MAELTIPADDIQSAIEEYVSSFTADTSREEVGTVVDAGDGIAHVEGLPSV
MLBr_01143|M.leprae_Br4923          MAELTISADDIQNAIEEYVSSFTADTFREEVGTVVDVGDSIAHVEGLPSV
TH_1560|M.thermoresistible__bu      MADLTISAADIQGAIEDYVASFESATEREETGTVVDAGDGIAHVEGLPSV
MAB_1451|M.abscessus_ATCC_1997      MTELTISSADISGAIEQYVATFSADPTREEIGIVSDAGDGIAHVEGLPSV
                                    *::* *.: **..***:**.:* : . *** * * *.**.**********

Mflv_2316|M.gilvum_PYR-GCK          MTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSV
Mvan_4330|M.vanbaalenii_PYR-1       MTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEQGQQVKRTGEVLSV
MSMEG_4938|M.smegmatis_MC2_155      MTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSV
MMAR_4089|M.marinum_M               MTQELLEFPGGVLGVALNLDEHSVGAVILGNFENIEEGQQVKRTGEVLSV
MUL_3956|M.ulcerans_Agy99           MTQELLEFPGGVLGVALNLDEHSVGAVILGNSENIEEGQQVKRTGEVLSV
MAV_1525|M.avium_104                MTQELLEFPGGVLGVALNLDEHSVGAVILGDFEKIEEGQQVKRTGEVLSV
Mb1340|M.bovis_AF2122/97            MTQELLEFPGGILGVALNLDEHSVGAVILGDFENIEEGQQVKRTGEVLSV
Rv1308|M.tuberculosis_H37Rv         MTQELLEFPGGILGVALNLDEHSVGAVILGDFENIEEGQQVKRTGEVLSV
MLBr_01143|M.leprae_Br4923          MTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSV
TH_1560|M.thermoresistible__bu      MAQELLEFPGGVLGVALNLDENEIGAVILGDFEKIEQGQQVRRTGEVLSV
MAB_1451|M.abscessus_ATCC_1997      MTQELLEFPGGVLGVALNLDERSVGTVVLGDFQDIEEGQQVKRTGEVLSV
                                    *:*********:*********..:*:*:**: :.*::**:*:***:****

Mflv_2316|M.gilvum_PYR-GCK          PVGDAFLGRVINPLGQPIDGQGDIESDTRRALELQAPSVVQRQGVSEPLQ
Mvan_4330|M.vanbaalenii_PYR-1       PVGDAFLGRVINPLGQPIDGQGDIEAEGRRALELQAPSVVQRQGVSEPLQ
MSMEG_4938|M.smegmatis_MC2_155      PVGDAFLGRVVNPLGQPIDGQGDIAAETRRALELQAPSVVQRQSVSEPLQ
MMAR_4089|M.marinum_M               PVGDAFLGRVINPLGQPIDGRGDIEAETRRALELQAPSVVQRQSVKEPLQ
MUL_3956|M.ulcerans_Agy99           PVGDAFLGRVINPLGQPIDGRGDIKAETRRALELQAPSVVQRQSVKEPLQ
MAV_1525|M.avium_104                PVGDAFLGRVVNPLGQPIDGQGDIETDIRRALEIQAPSVVQRQSVKEPLQ
Mb1340|M.bovis_AF2122/97            PVGDGFLGRVVNPLGQPIDGRGDVDSDTRRALELQAPSVVHRQGVKEPLQ
Rv1308|M.tuberculosis_H37Rv         PVGDGFLGRVVNPLGQPIDGRGDVDSDTRRALELQAPSVVHRQGVKEPLQ
MLBr_01143|M.leprae_Br4923          PVGEAFMGRVVNPLGQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQ
TH_1560|M.thermoresistible__bu      PVGDGYLGRVVNPLGQPIDGKGDIETTGRRALELQAPSVVQRQSVFEPLQ
MAB_1451|M.abscessus_ATCC_1997      PVGDAFLGRVINPLGQPIDGRGDIEAETRRALELQAPSVVQRQSVSEPLQ
                                    ***:.::***:*********:**: :  *****:******:**.* ****

Mflv_2316|M.gilvum_PYR-GCK          TGIKAIDSQTPIGRGQRQLIIGDRKTGKTAVAVDTILNQRKAWETGDPKQ
Mvan_4330|M.vanbaalenii_PYR-1       TGIKAIDSMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWATGDPKQ
MSMEG_4938|M.smegmatis_MC2_155      TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWLTGDPKQ
MMAR_4089|M.marinum_M               TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWETGDPKK
MUL_3956|M.ulcerans_Agy99           TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWETGDPKK
MAV_1525|M.avium_104                TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDEKK
Mb1340|M.bovis_AF2122/97            TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDPKK
Rv1308|M.tuberculosis_H37Rv         TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDPKK
MLBr_01143|M.leprae_Br4923          TGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCVDTILNQRQNWESGDPKR
TH_1560|M.thermoresistible__bu      TGIKAIDSMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRANWETGDSKQ
MAB_1451|M.abscessus_ATCC_1997      TGIKAIDSQTPIGRGQRQLIIGDRKTGKTAVCIDTILNQKQAWETGDPAQ
                                    *******: **********:***********.:******:  * :**  :

Mflv_2316|M.gilvum_PYR-GCK          QVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAP
Mvan_4330|M.vanbaalenii_PYR-1       QVRCVYVAIGQKGTTIASVKRALEEGGAMECTTIVAAPASDAAGFKWLAP
MSMEG_4938|M.smegmatis_MC2_155      QVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAP
MMAR_4089|M.marinum_M               QVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAP
MUL_3956|M.ulcerans_Agy99           QVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAP
MAV_1525|M.avium_104                QVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAP
Mb1340|M.bovis_AF2122/97            QVRCVYVAIGQKGTTIAAVRRTLEEGGAMDYTTIVAAAASESAGFKWLAP
Rv1308|M.tuberculosis_H37Rv         QVRCVYVAIGQKGTTIAAVRRTLEEGGAMDYTTIVAAAASESAGFKWLAP
MLBr_01143|M.leprae_Br4923          QVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAALASDSAGFKWLAP
TH_1560|M.thermoresistible__bu      QVRCVYVAIGQKGTTIASVRQTLEEGGAMDYTTIVAAPASDSAGFKWLAP
MAB_1451|M.abscessus_ATCC_1997      QVRCIYVAVGQKGSTVAAVRRTLDEAGALEYTTIVAAPASDAAGFKWLAP
                                    ****:***:****:*:*:*:::*:*.**:: ****** **::********

Mflv_2316|M.gilvum_PYR-GCK          YTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGD
Mvan_4330|M.vanbaalenii_PYR-1       YTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGD
MSMEG_4938|M.smegmatis_MC2_155      YTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGD
MMAR_4089|M.marinum_M               YTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MUL_3956|M.ulcerans_Agy99           YTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MAV_1525|M.avium_104                YTGSAIAQHWMYDGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGD
Mb1340|M.bovis_AF2122/97            YTGSAIAQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGD
Rv1308|M.tuberculosis_H37Rv         YTGSAIAQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MLBr_01143|M.leprae_Br4923          YTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
TH_1560|M.thermoresistible__bu      YTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MAB_1451|M.abscessus_ATCC_1997      YTGSALGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
                                    *****:.*****:******:****:***:*****************:***

Mflv_2316|M.gilvum_PYR-GCK          VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
Mvan_4330|M.vanbaalenii_PYR-1       VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
MSMEG_4938|M.smegmatis_MC2_155      VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
MMAR_4089|M.marinum_M               VFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITD
MUL_3956|M.ulcerans_Agy99           VFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITD
MAV_1525|M.avium_104                VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAYIPTNVISITD
Mb1340|M.bovis_AF2122/97            VFYLHSRLLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITD
Rv1308|M.tuberculosis_H37Rv         VFYLHSRLLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITD
MLBr_01143|M.leprae_Br4923          VFYLHSRLLERCAKLADHLGGGSLTGLPIIETKANDISAYIPTNVISITD
TH_1560|M.thermoresistible__bu      VFYLHSRLLERCAKLSDDLGGGSLTGLPVIETKANDISAYIPTNVISITD
MAB_1451|M.abscessus_ATCC_1997      VFYLHSRLLERCAKLSDELGAGSLTGLPIIETKANDISAYIPTNVISITD
                                    ***************:*.**.**:****:**********:**********

Mflv_2316|M.gilvum_PYR-GCK          GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQY
Mvan_4330|M.vanbaalenii_PYR-1       GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQY
MSMEG_4938|M.smegmatis_MC2_155      GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
MMAR_4089|M.marinum_M               GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
MUL_3956|M.ulcerans_Agy99           GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAIKEVAGSLRLDLSQY
MAV_1525|M.avium_104                GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQF
Mb1340|M.bovis_AF2122/97            GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
Rv1308|M.tuberculosis_H37Rv         GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
MLBr_01143|M.leprae_Br4923          GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
TH_1560|M.thermoresistible__bu      GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKDVAGSLRLDLSQY
MAB_1451|M.abscessus_ATCC_1997      GQCFLQTDLFNQGVRPAVNVGVSVSRVGGAAQIKAMKEVAGSLRLELSQY
                                    *****::**********:*****************:*:*******:***:

Mflv_2316|M.gilvum_PYR-GCK          RELESFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYSVEDQVVAIFL
Mvan_4330|M.vanbaalenii_PYR-1       RELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYPVEDQVVAIYL
MSMEG_4938|M.smegmatis_MC2_155      RELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFL
MMAR_4089|M.marinum_M               RELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFL
MUL_3956|M.ulcerans_Agy99           RELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFL
MAV_1525|M.avium_104                RELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVVSIFL
Mb1340|M.bovis_AF2122/97            RELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFL
Rv1308|M.tuberculosis_H37Rv         RELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFL
MLBr_01143|M.leprae_Br4923          RELEAFAAFASDLDATSKAQLERGARLVELLKQPQYQPMPVEEQVISLFL
TH_1560|M.thermoresistible__bu      RELEAFAAFASDLDATSKAQLDRGARLVEVLKQPQNSPMPVEDQVVAIFL
MAB_1451|M.abscessus_ATCC_1997      RELEAFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVEEQVVAIYL
                                    ****:**********:*****:*******:*****  * .**:**::::*

Mflv_2316|M.gilvum_PYR-GCK          GTKGHLDSVPVEDVSRFEQEVLEHVKASHDDILQEIRETKKLSESTEEKL
Mvan_4330|M.vanbaalenii_PYR-1       GTGGHLDSVPVEDVARFESELLEHVKASHGDILAGIRESKKLSEEAEQKL
MSMEG_4938|M.smegmatis_MC2_155      GTQGHLDSVPVEDVQRFESELLEHVKASHSDIFDGIRETKKLSEEAEEKL
MMAR_4089|M.marinum_M               GTGGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEAL
MUL_3956|M.ulcerans_Agy99           GTGGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEAL
MAV_1525|M.avium_104                GTGGHLDSVPVEDVRRFETELLDHMRASEDKILAGIRDTQKLSDEAAEEL
Mb1340|M.bovis_AF2122/97            GTGGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKL
Rv1308|M.tuberculosis_H37Rv         GTGGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKL
MLBr_01143|M.leprae_Br4923          GTGGHLDSVPVGDVRRFETELLDHIRVAQEEILTEIRESQKLTDEAADSL
TH_1560|M.thermoresistible__bu      GTKGHLDSVPIEDVQRFEAEFLEHVKASHQEILTDIRDSKKLSDETAEKL
MAB_1451|M.abscessus_ATCC_1997      GTGGHLDSVPVEDVMRFEQEFLDHVRGSHADILADIRETKKFSEDTETKL
                                    ** *******: ** *** *.*:*:: :. .::  **:::*:::.:   *

Mflv_2316|M.gilvum_PYR-GCK          TNVINDFKKGFSASDGSSVVVNEADAEAMDEADVEKESVKVRKPAPKK--
Mvan_4330|M.vanbaalenii_PYR-1       ANVINEFKKGFSASDGSSVVVNEAEAEAMDEADVEKESVKVRKPAPKK--
MSMEG_4938|M.smegmatis_MC2_155      VSVINEFKKGFQASDGSSVVVSEN-AEALDPEDLEKESVKVRKPAPKKA-
MMAR_4089|M.marinum_M               TKVINHFKKGFASSTGESVVPDEH-VEAMDEEDLGKESVKVKKPAPQKKK
MUL_3956|M.ulcerans_Agy99           TKVINHFKKGFASSTGESVVPDEH-VEAMDEEDLGKESVKVKKPAPQKKK
MAV_1525|M.avium_104                EKVINNFKKGFAATGGASVVPDEH-VEALDEEELEKESVKVKKPAPEKKA
Mb1340|M.bovis_AF2122/97            TEVIKNFKKGFAATGGGSVVPDEH-VEALDEDKLAKEAVKVKKPAPKKKK
Rv1308|M.tuberculosis_H37Rv         TEVIKNFKKGFAATGGGSVVPDEH-VEALDEDKLAKEAVKVKKPAPKKKK
MLBr_01143|M.leprae_Br4923          TEVIKSFKKGFAATGGASVVPNEH-VAALDEEKLDKESVKVHQAIPAKTS
TH_1560|M.thermoresistible__bu      VNVVNEFKKGFSTTSGESVIPDEG-VEAMDEADLEKESVQVRKPPPPKKK
MAB_1451|M.abscessus_ATCC_1997      TNAVNAFKKSFAATDGSSVEVKGVAAEALDESAVGQETVQVRKPAPKK--
                                     ..:: ***.* :: * **  .   . *:*   : :*:*:*::. * *  

Mflv_2316|M.gilvum_PYR-GCK          ---------
Mvan_4330|M.vanbaalenii_PYR-1       ---------
MSMEG_4938|M.smegmatis_MC2_155      ---------
MMAR_4089|M.marinum_M               ---------
MUL_3956|M.ulcerans_Agy99           ---------
MAV_1525|M.avium_104                KKEQK----
Mb1340|M.bovis_AF2122/97            ---------
Rv1308|M.tuberculosis_H37Rv         ---------
MLBr_01143|M.leprae_Br4923          EKSKNSTPR
TH_1560|M.thermoresistible__bu      ---------
MAB_1451|M.abscessus_ATCC_1997      ---------