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M. ulcerans Agy99 MUL_3956 (atpA)

annotation: F0F1 ATP synthase subunit alpha
coordinates: 4420518 - 4422167
length: 549

AELTISANDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSVMTQELLEFPGGVLGVALNLDE
HSVGAVILGNSENIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGRGDIKAETRRALELQAPSVVQ
RQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWETGDPKKQVRCVYVAVGQ
KGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAPYTGSAVAQHWMYDGKHVLIVFDDLTKQAEAY
RAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDG
QCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAIKEVAGSLRLDLSQYRELEAFAAFASDLDATSKAQL
DRGARLVELLKQPQYQPMPVEEQVISIFLGTGGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQK
LTEETEEALTKVINHFKKGFASSTGESVVPDEHVEAMDEEDLGKESVKVKKPAPQKKK*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. ulcerans Agy99MUL_3956atpA-100% (549)F0F1 ATP synthase subunit alpha
M. ulcerans Agy99MUL_3954atpD7e-2324.46% (417) F0F1 ATP synthase subunit beta
M. ulcerans Agy99MUL_3967rho3e-0523.81% (231) transcription termination factor Rho

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1340atpA0.090.35% (549) F0F1 ATP synthase subunit alpha
M. gilvum PYR-GCKMflv_2316-0.085.04% (548) F0F1 ATP synthase subunit alpha
M. tuberculosis H37RvRv1308atpA0.090.35% (549) F0F1 ATP synthase subunit alpha
M. leprae Br4923MLBr_01143atpA0.088.67% (547) F0F1 ATP synthase subunit alpha
M. abscessus ATCC 19977MAB_1451-0.082.12% (548) F0F1 ATP synthase subunit alpha
M. marinum MMMAR_4089atpA0.099.45% (549) ATP synthase alpha chain AtpA
M. avium 104MAV_1525atpA0.092.34% (548) F0F1 ATP synthase subunit alpha
M. smegmatis MC2 155MSMEG_4938atpA0.086.29% (547) F0F1 ATP synthase subunit alpha
M. thermoresistible (build 8)TH_1560atpA0.085.25% (549) ATP synthase F1, alpha subunit
M. vanbaalenii PYR-1Mvan_4330-0.085.04% (548) F0F1 ATP synthase subunit alpha

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2316|M.gilvum_PYR-GCK          MAELIISASDIEGAIEDYVSSFTADSEREEIGTVIDAGDGIAHVEGLPSV
Mvan_4330|M.vanbaalenii_PYR-1       MAELTISASDIEGAIEDYVSSFTADSGREEIGVVIDAGDGIAHVEGLPSV
MSMEG_4938|M.smegmatis_MC2_155      MAELTISAADIEGAIEDYVSSFSADTEREEIGTVIDAGDGIAHVEGLPSV
Mb1340|M.bovis_AF2122/97            MAELTIPADDIQSAIEEYVSSFTADTSREEVGTVVDAGDGIAHVEGLPSV
Rv1308|M.tuberculosis_H37Rv         MAELTIPADDIQSAIEEYVSSFTADTSREEVGTVVDAGDGIAHVEGLPSV
MLBr_01143|M.leprae_Br4923          MAELTISADDIQNAIEEYVSSFTADTFREEVGTVVDVGDSIAHVEGLPSV
MUL_3956|M.ulcerans_Agy99           MAELTISANDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSV
MMAR_4089|M.marinum_M               MAELTISANDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSV
MAV_1525|M.avium_104                MAELTISADDIQSAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGLPSV
TH_1560|M.thermoresistible__bu      MADLTISAADIQGAIEDYVASFESATEREETGTVVDAGDGIAHVEGLPSV
MAB_1451|M.abscessus_ATCC_1997      MTELTISSADISGAIEQYVATFSADPTREEIGIVSDAGDGIAHVEGLPSV
                                    *::* *.: **..***:**.:* : . *** * * *.**.**********

Mflv_2316|M.gilvum_PYR-GCK          MTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSV
Mvan_4330|M.vanbaalenii_PYR-1       MTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEQGQQVKRTGEVLSV
MSMEG_4938|M.smegmatis_MC2_155      MTQELLEFPGGVLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSV
Mb1340|M.bovis_AF2122/97            MTQELLEFPGGILGVALNLDEHSVGAVILGDFENIEEGQQVKRTGEVLSV
Rv1308|M.tuberculosis_H37Rv         MTQELLEFPGGILGVALNLDEHSVGAVILGDFENIEEGQQVKRTGEVLSV
MLBr_01143|M.leprae_Br4923          MTQELLEFPGGILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSV
MUL_3956|M.ulcerans_Agy99           MTQELLEFPGGVLGVALNLDEHSVGAVILGNSENIEEGQQVKRTGEVLSV
MMAR_4089|M.marinum_M               MTQELLEFPGGVLGVALNLDEHSVGAVILGNFENIEEGQQVKRTGEVLSV
MAV_1525|M.avium_104                MTQELLEFPGGVLGVALNLDEHSVGAVILGDFEKIEEGQQVKRTGEVLSV
TH_1560|M.thermoresistible__bu      MAQELLEFPGGVLGVALNLDENEIGAVILGDFEKIEQGQQVRRTGEVLSV
MAB_1451|M.abscessus_ATCC_1997      MTQELLEFPGGVLGVALNLDERSVGTVVLGDFQDIEEGQQVKRTGEVLSV
                                    *:*********:*********..:*:*:**: :.*::**:*:***:****

Mflv_2316|M.gilvum_PYR-GCK          PVGDAFLGRVINPLGQPIDGQGDIESDTRRALELQAPSVVQRQGVSEPLQ
Mvan_4330|M.vanbaalenii_PYR-1       PVGDAFLGRVINPLGQPIDGQGDIEAEGRRALELQAPSVVQRQGVSEPLQ
MSMEG_4938|M.smegmatis_MC2_155      PVGDAFLGRVVNPLGQPIDGQGDIAAETRRALELQAPSVVQRQSVSEPLQ
Mb1340|M.bovis_AF2122/97            PVGDGFLGRVVNPLGQPIDGRGDVDSDTRRALELQAPSVVHRQGVKEPLQ
Rv1308|M.tuberculosis_H37Rv         PVGDGFLGRVVNPLGQPIDGRGDVDSDTRRALELQAPSVVHRQGVKEPLQ
MLBr_01143|M.leprae_Br4923          PVGEAFMGRVVNPLGQPIDGRGDIEAEARRALELQAPSVVQRQSVKEPLQ
MUL_3956|M.ulcerans_Agy99           PVGDAFLGRVINPLGQPIDGRGDIKAETRRALELQAPSVVQRQSVKEPLQ
MMAR_4089|M.marinum_M               PVGDAFLGRVINPLGQPIDGRGDIEAETRRALELQAPSVVQRQSVKEPLQ
MAV_1525|M.avium_104                PVGDAFLGRVVNPLGQPIDGQGDIETDIRRALEIQAPSVVQRQSVKEPLQ
TH_1560|M.thermoresistible__bu      PVGDGYLGRVVNPLGQPIDGKGDIETTGRRALELQAPSVVQRQSVFEPLQ
MAB_1451|M.abscessus_ATCC_1997      PVGDAFLGRVINPLGQPIDGRGDIEAETRRALELQAPSVVQRQSVSEPLQ
                                    ***:.::***:*********:**: :  *****:******:**.* ****

Mflv_2316|M.gilvum_PYR-GCK          TGIKAIDSQTPIGRGQRQLIIGDRKTGKTAVAVDTILNQRKAWETGDPKQ
Mvan_4330|M.vanbaalenii_PYR-1       TGIKAIDSMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWATGDPKQ
MSMEG_4938|M.smegmatis_MC2_155      TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQREAWLTGDPKQ
Mb1340|M.bovis_AF2122/97            TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDPKK
Rv1308|M.tuberculosis_H37Rv         TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDPKK
MLBr_01143|M.leprae_Br4923          TGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCVDTILNQRQNWESGDPKR
MUL_3956|M.ulcerans_Agy99           TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWETGDPKK
MMAR_4089|M.marinum_M               TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWETGDPKK
MAV_1525|M.avium_104                TGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDEKK
TH_1560|M.thermoresistible__bu      TGIKAIDSMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRANWETGDSKQ
MAB_1451|M.abscessus_ATCC_1997      TGIKAIDSQTPIGRGQRQLIIGDRKTGKTAVCIDTILNQKQAWETGDPAQ
                                    *******: **********:***********.:******:  * :**  :

Mflv_2316|M.gilvum_PYR-GCK          QVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAP
Mvan_4330|M.vanbaalenii_PYR-1       QVRCVYVAIGQKGTTIASVKRALEEGGAMECTTIVAAPASDAAGFKWLAP
MSMEG_4938|M.smegmatis_MC2_155      QVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASDAAGFKWLAP
Mb1340|M.bovis_AF2122/97            QVRCVYVAIGQKGTTIAAVRRTLEEGGAMDYTTIVAAAASESAGFKWLAP
Rv1308|M.tuberculosis_H37Rv         QVRCVYVAIGQKGTTIAAVRRTLEEGGAMDYTTIVAAAASESAGFKWLAP
MLBr_01143|M.leprae_Br4923          QVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAALASDSAGFKWLAP
MUL_3956|M.ulcerans_Agy99           QVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAP
MMAR_4089|M.marinum_M               QVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAP
MAV_1525|M.avium_104                QVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAP
TH_1560|M.thermoresistible__bu      QVRCVYVAIGQKGTTIASVRQTLEEGGAMDYTTIVAAPASDSAGFKWLAP
MAB_1451|M.abscessus_ATCC_1997      QVRCIYVAVGQKGSTVAAVRRTLDEAGALEYTTIVAAPASDAAGFKWLAP
                                    ****:***:****:*:*:*:::*:*.**:: ****** **::********

Mflv_2316|M.gilvum_PYR-GCK          YTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGD
Mvan_4330|M.vanbaalenii_PYR-1       YTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGD
MSMEG_4938|M.smegmatis_MC2_155      YTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGD
Mb1340|M.bovis_AF2122/97            YTGSAIAQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGD
Rv1308|M.tuberculosis_H37Rv         YTGSAIAQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MLBr_01143|M.leprae_Br4923          YTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MUL_3956|M.ulcerans_Agy99           YTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MMAR_4089|M.marinum_M               YTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MAV_1525|M.avium_104                YTGSAIAQHWMYDGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGD
TH_1560|M.thermoresistible__bu      YTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
MAB_1451|M.abscessus_ATCC_1997      YTGSALGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGD
                                    *****:.*****:******:****:***:*****************:***

Mflv_2316|M.gilvum_PYR-GCK          VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
Mvan_4330|M.vanbaalenii_PYR-1       VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
MSMEG_4938|M.smegmatis_MC2_155      VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITD
Mb1340|M.bovis_AF2122/97            VFYLHSRLLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITD
Rv1308|M.tuberculosis_H37Rv         VFYLHSRLLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITD
MLBr_01143|M.leprae_Br4923          VFYLHSRLLERCAKLADHLGGGSLTGLPIIETKANDISAYIPTNVISITD
MUL_3956|M.ulcerans_Agy99           VFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITD
MMAR_4089|M.marinum_M               VFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITD
MAV_1525|M.avium_104                VFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAYIPTNVISITD
TH_1560|M.thermoresistible__bu      VFYLHSRLLERCAKLSDDLGGGSLTGLPVIETKANDISAYIPTNVISITD
MAB_1451|M.abscessus_ATCC_1997      VFYLHSRLLERCAKLSDELGAGSLTGLPIIETKANDISAYIPTNVISITD
                                    ***************:*.**.**:****:**********:**********

Mflv_2316|M.gilvum_PYR-GCK          GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQY
Mvan_4330|M.vanbaalenii_PYR-1       GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQY
MSMEG_4938|M.smegmatis_MC2_155      GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
Mb1340|M.bovis_AF2122/97            GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
Rv1308|M.tuberculosis_H37Rv         GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
MLBr_01143|M.leprae_Br4923          GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
MUL_3956|M.ulcerans_Agy99           GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAIKEVAGSLRLDLSQY
MMAR_4089|M.marinum_M               GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQY
MAV_1525|M.avium_104                GQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQF
TH_1560|M.thermoresistible__bu      GQCFLETDLFNQGVRPAINVGVSVSRVGGAAQIKAMKDVAGSLRLDLSQY
MAB_1451|M.abscessus_ATCC_1997      GQCFLQTDLFNQGVRPAVNVGVSVSRVGGAAQIKAMKEVAGSLRLELSQY
                                    *****::**********:*****************:*:*******:***:

Mflv_2316|M.gilvum_PYR-GCK          RELESFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYSVEDQVVAIFL
Mvan_4330|M.vanbaalenii_PYR-1       RELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYTPYPVEDQVVAIYL
MSMEG_4938|M.smegmatis_MC2_155      RELEAFAAFASDLDAASKAQLDRGARLVELLKQPQYSPLAVEEQVVAIFL
Mb1340|M.bovis_AF2122/97            RELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFL
Rv1308|M.tuberculosis_H37Rv         RELEAFAAFASDLDAASKAQLERGARLVELLKQPQSQPMPVEEQVVSIFL
MLBr_01143|M.leprae_Br4923          RELEAFAAFASDLDATSKAQLERGARLVELLKQPQYQPMPVEEQVISLFL
MUL_3956|M.ulcerans_Agy99           RELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFL
MMAR_4089|M.marinum_M               RELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVISIFL
MAV_1525|M.avium_104                RELEAFAAFASDLDATSKAQLDRGARLVELLKQPQYQPMPVEEQVVSIFL
TH_1560|M.thermoresistible__bu      RELEAFAAFASDLDATSKAQLDRGARLVEVLKQPQNSPMPVEDQVVAIFL
MAB_1451|M.abscessus_ATCC_1997      RELEAFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVEEQVVAIYL
                                    ****:**********:*****:*******:*****  * .**:**::::*

Mflv_2316|M.gilvum_PYR-GCK          GTKGHLDSVPVEDVSRFEQEVLEHVKASHDDILQEIRETKKLSESTEEKL
Mvan_4330|M.vanbaalenii_PYR-1       GTGGHLDSVPVEDVARFESELLEHVKASHGDILAGIRESKKLSEEAEQKL
MSMEG_4938|M.smegmatis_MC2_155      GTQGHLDSVPVEDVQRFESELLEHVKASHSDIFDGIRETKKLSEEAEEKL
Mb1340|M.bovis_AF2122/97            GTGGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKL
Rv1308|M.tuberculosis_H37Rv         GTGGHLDSVPVEDVRRFETELLDHMRASEEEILTEIRDSQKLTEEAADKL
MLBr_01143|M.leprae_Br4923          GTGGHLDSVPVGDVRRFETELLDHIRVAQEEILTEIRESQKLTDEAADSL
MUL_3956|M.ulcerans_Agy99           GTGGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEAL
MMAR_4089|M.marinum_M               GTGGHLDSVPVEDVRRFETELLDHIRASEENLLSTIRDTQKLTEETEEAL
MAV_1525|M.avium_104                GTGGHLDSVPVEDVRRFETELLDHMRASEDKILAGIRDTQKLSDEAAEEL
TH_1560|M.thermoresistible__bu      GTKGHLDSVPIEDVQRFEAEFLEHVKASHQEILTDIRDSKKLSDETAEKL
MAB_1451|M.abscessus_ATCC_1997      GTGGHLDSVPVEDVMRFEQEFLDHVRGSHADILADIRETKKFSEDTETKL
                                    ** *******: ** *** *.*:*:: :. .::  **:::*:::.:   *

Mflv_2316|M.gilvum_PYR-GCK          TNVINDFKKGFSASDGSSVVVNEADAEAMDEADVEKESVKVRKPAPKK--
Mvan_4330|M.vanbaalenii_PYR-1       ANVINEFKKGFSASDGSSVVVNEAEAEAMDEADVEKESVKVRKPAPKK--
MSMEG_4938|M.smegmatis_MC2_155      VSVINEFKKGFQASDGSSVVVSEN-AEALDPEDLEKESVKVRKPAPKKA-
Mb1340|M.bovis_AF2122/97            TEVIKNFKKGFAATGGGSVVPDEH-VEALDEDKLAKEAVKVKKPAPKKKK
Rv1308|M.tuberculosis_H37Rv         TEVIKNFKKGFAATGGGSVVPDEH-VEALDEDKLAKEAVKVKKPAPKKKK
MLBr_01143|M.leprae_Br4923          TEVIKSFKKGFAATGGASVVPNEH-VAALDEEKLDKESVKVHQAIPAKTS
MUL_3956|M.ulcerans_Agy99           TKVINHFKKGFASSTGESVVPDEH-VEAMDEEDLGKESVKVKKPAPQKKK
MMAR_4089|M.marinum_M               TKVINHFKKGFASSTGESVVPDEH-VEAMDEEDLGKESVKVKKPAPQKKK
MAV_1525|M.avium_104                EKVINNFKKGFAATGGASVVPDEH-VEALDEEELEKESVKVKKPAPEKKA
TH_1560|M.thermoresistible__bu      VNVVNEFKKGFSTTSGESVIPDEG-VEAMDEADLEKESVQVRKPPPPKKK
MAB_1451|M.abscessus_ATCC_1997      TNAVNAFKKSFAATDGSSVEVKGVAAEALDESAVGQETVQVRKPAPKK--
                                     ..:: ***.* :: * **  .   . *:*   : :*:*:*::. * *  

Mflv_2316|M.gilvum_PYR-GCK          ---------
Mvan_4330|M.vanbaalenii_PYR-1       ---------
MSMEG_4938|M.smegmatis_MC2_155      ---------
Mb1340|M.bovis_AF2122/97            ---------
Rv1308|M.tuberculosis_H37Rv         ---------
MLBr_01143|M.leprae_Br4923          EKSKNSTPR
MUL_3956|M.ulcerans_Agy99           ---------
MMAR_4089|M.marinum_M               ---------
MAV_1525|M.avium_104                KKEQK----
TH_1560|M.thermoresistible__bu      ---------
MAB_1451|M.abscessus_ATCC_1997      ---------