For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MADNPFRDTGTIYLKACVNGARTPDHHPNLPVTPDQLAAEAVAVHAAGAKAVHMHPKGADGRDSLRAEEV DAAVAAVREALPGLPLGVTTGFWALPDAQQRLEAIEEWSILPDFASVNWHEPGSPEVAELLLSRGIGVEI GLFHAEAARAWAASEMTQHCMRVMIELGADGDVSRADEILGVVDGARSPAPVLLHGLDESCWPLLEHAGV RRIQARIGLEDTVCLPDGSVADGNAALVAAALELLSR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1802 | - | - | 100% (247) | hypothetical protein Mflv_1802 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv1718 | - | 3e-08 | 24.58% (240) | hypothetical protein Rv1718 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2923c | - | 2e-62 | 51.72% (232) | hypothetical protein MAB_2923c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5614 | - | 3e-98 | 70.46% (237) | hypothetical protein MSMEG_5614 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4947 | - | 1e-113 | 79.50% (239) | hypothetical protein Mvan_4947 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1802|M.gilvum_PYR-GCK ---------------MADNPFRD------TGTIYLKACVNG-ARTPDHHP
Mvan_4947|M.vanbaalenii_PYR-1 MKRSASECTRPPPHIKRPTPNGDKMGDMVTAGVYLKACING-ARTPDQHP
MSMEG_5614|M.smegmatis_MC2_155 ----------------MDR----------SHTPYVKACING-ARTPDQHP
MAB_2923c|M.abscessus_ATCC_199 --------------------------------MYLKACLNG-VRRKDQHP
Rv1718|M.tuberculosis_H37Rv ------------------------------MSIVITVAPTGPIATKADNP
:... .* .:*
Mflv_1802|M.gilvum_PYR-GCK NLPVTPDQLAAEAVAVHAAGAKAVHMHPKGADGRDSLRAEEVDAAVAAVR
Mvan_4947|M.vanbaalenii_PYR-1 RLPVTPDQLAAEAVAAHRAGASAVHMHPKTADGVDSLLAREVDAAVAAVR
MSMEG_5614|M.smegmatis_MC2_155 NLPVTPDQLADAALSVHRAGAQAVHLHPKADDGTDSLEPDVVAAAVSAVR
MAB_2923c|M.abscessus_ATCC_199 AIPCTAEEIAADAAACRDAGAAAVHVHAKDAQGFDSLLASAIDPVVAALR
Rv1718|M.tuberculosis_H37Rv ALPTSPEEIATAVEQAYHAGAAVAHIHLRDENERPTADPNIARRAMDLIG
:* :.:::* . *** ..*:* : : : . .: :
Mflv_1802|M.gilvum_PYR-GCK EALPGLPLGVTTGFWALPDAQQRLEAIEEWSILP-------DFASVNWHE
Mvan_4947|M.vanbaalenii_PYR-1 HTLPGLPLGVTTGYWALPDAEQRLRAVESWSVLP-------DFASLNWHE
MSMEG_5614|M.smegmatis_MC2_155 HAVPGFPLGVTTGFWALPDPKKRLRTVEAWEVLP-------DFASVNWHE
MAB_2923c|M.abscessus_ATCC_199 ARCPGLPVGVTTGAWALADPAARCAAINGWTELP-------DFASVNWHE
Rv1718|M.tuberculosis_H37Rv ERCP-ILIQLSTGVGLTVPFEQREQLVELRPRMATLNPCSMSFGAGEFRN
* : : ::** * :: :. .*.: ::::
Mflv_1802|M.gilvum_PYR-GCK P--GSPEVAELLLSRGIGVEIGLFHA---EAARAWAASEMTQHCMRVMIE
Mvan_4947|M.vanbaalenii_PYR-1 P--GSPELARLLLSRGLGVEVGLFHA---DAARSWAASDVTQHCMRVMVE
MSMEG_5614|M.smegmatis_MC2_155 P--GSPELAELLLSRGVGVEAGLFHA---DAARAWAASDMAAHCLRVMVE
MAB_2923c|M.abscessus_ATCC_199 E--GAAEVAEALLNRGVGVEAGLWNE---AAALAWSRSPLRRDCFRVLLE
Rv1718|M.tuberculosis_H37Rv PPQAVRRLAARMRELDIKPELEIYDTGHLEACLRLWAEDLLAEPLQFSIV
. .:* : . .: * ::. *. . : . ::. :
Mflv_1802|M.gilvum_PYR-GCK LG-ADGDVSRADEILGVVDGARSP--APVLLHGLDESCWPLLEHAGVRRI
Mvan_4947|M.vanbaalenii_PYR-1 LG-ADGDTTTADELLGIVATAGSP--APVLLHGLDESCWPLLEHARVRGV
MSMEG_5614|M.smegmatis_MC2_155 LS-PDAGTGTADELLAIVTSAGSQ--APALLHGLDESAWPLLQHAGQCGV
MAB_2923c|M.abscessus_ATCC_199 LPGGVAGTAVEEQAMRMLTQVRISGAVDVLLHGEDSSAWPMLDLAAARGV
Rv1718|M.tuberculosis_H37Rv LGVRGGMAATADNLLTMVRRLPPG--AIWQVIAIGKANMELTAMGLALGG
* . . :: : :: . : . ..: : .
Mflv_1802|M.gilvum_PYR-GCK QARIGLEDTVCLPDGSVADGNAALVAAALELLSR----------------
Mvan_4947|M.vanbaalenii_PYR-1 QTRIGMEDTLVLPDGSTAEGNAALVAAAVELLSR----------------
MSMEG_5614|M.smegmatis_MC2_155 QTRIGMEDTLRLPDGTVADDNAALVTAAVELLSR----------------
MAB_2923c|M.abscessus_ATCC_199 AARIGLEDTLRLPEGTTAASNAELVAAGHGRIRTATTREVC---------
Rv1718|M.tuberculosis_H37Rv NARVGLEDTLYLRKGELAPSNLALVSRTIRLAEALDLPIASVEEAEAALQ
:*:*:***: * .* * .* **:
Mflv_1802|M.gilvum_PYR-GCK -----
Mvan_4947|M.vanbaalenii_PYR-1 -----
MSMEG_5614|M.smegmatis_MC2_155 -----
MAB_2923c|M.abscessus_ATCC_199 -----
Rv1718|M.tuberculosis_H37Rv LPGTS