For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DRSHTPYVKACINGARTPDQHPNLPVTPDQLADAALSVHRAGAQAVHLHPKADDGTDSLEPDVVAAAVSA VRHAVPGFPLGVTTGFWALPDPKKRLRTVEAWEVLPDFASVNWHEPGSPELAELLLSRGVGVEAGLFHAD AARAWAASDMAAHCLRVMVELSPDAGTGTADELLAIVTSAGSQAPALLHGLDESAWPLLQHAGQCGVQTR IGMEDTLRLPDGTVADDNAALVTAAVELLSR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5614 | - | - | 100% (242) | hypothetical protein MSMEG_5614 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1746 | - | 3e-05 | 22.86% (175) | hypothetical protein Mb1746 |
M. gilvum PYR-GCK | Mflv_1802 | - | 2e-98 | 70.46% (237) | hypothetical protein Mflv_1802 |
M. tuberculosis H37Rv | Rv1718 | - | 5e-11 | 24.15% (236) | hypothetical protein Rv1718 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2923c | - | 4e-60 | 50.22% (231) | hypothetical protein MAB_2923c |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4947 | - | 1e-101 | 75.32% (235) | hypothetical protein Mvan_4947 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1802|M.gilvum_PYR-GCK ---------------MADNPFRD------TGTIYLKACVNG-ARTPDHHP Mvan_4947|M.vanbaalenii_PYR-1 MKRSASECTRPPPHIKRPTPNGDKMGDMVTAGVYLKACING-ARTPDQHP MSMEG_5614|M.smegmatis_MC2_155 ----------------MDR----------SHTPYVKACING-ARTPDQHP MAB_2923c|M.abscessus_ATCC_199 --------------------------------MYLKACLNG-VRRKDQHP Mb1746|M.bovis_AF2122/97 ------------------------------MSIVITVAPTGPIATKADNP Rv1718|M.tuberculosis_H37Rv ------------------------------MSIVITVAPTGPIATKADNP :... .* .:* Mflv_1802|M.gilvum_PYR-GCK NLPVTPDQLAAEAVAVHAAGAKAVHMHPKGADGRDSLRAEEVDAAVAAVR Mvan_4947|M.vanbaalenii_PYR-1 RLPVTPDQLAAEAVAAHRAGASAVHMHPKTADGVDSLLAREVDAAVAAVR MSMEG_5614|M.smegmatis_MC2_155 NLPVTPDQLADAALSVHRAGAQAVHLHPKADDGTDSLEPDVVAAAVSAVR MAB_2923c|M.abscessus_ATCC_199 AIPCTAEEIAADAAACRDAGAAAVHVHAKDAQGFDSLLASAIDPVVAALR Mb1746|M.bovis_AF2122/97 ALPTSPEEIATAVEQAYHAGAAVAHIHLRDENERPTADPNIARRAMDLIG Rv1718|M.tuberculosis_H37Rv ALPTSPEEIATAVEQAYHAGAAVAHIHLRDENERPTADPNIARRAMDLIG :* :.:::* . *** ..*:* : : : . .: : Mflv_1802|M.gilvum_PYR-GCK EALPGLPLGVTTGFWALPDAQQRLEAIEEWSILP-------DFASVNWHE Mvan_4947|M.vanbaalenii_PYR-1 HTLPGLPLGVTTGYWALPDAEQRLRAVESWSVLP-------DFASLNWHE MSMEG_5614|M.smegmatis_MC2_155 HAVPGFPLGVTTGFWALPDPKKRLRTVEAWEVLP-------DFASVNWHE MAB_2923c|M.abscessus_ATCC_199 ARCPGLPVGVTTGAWALADPAARCAAINGWTELP-------DFASVNWHE Mb1746|M.bovis_AF2122/97 ERCP-ILIQLSTGVGLTVPFEQREQLVELRPRMATLNPCSMSFGAGEFRN Rv1718|M.tuberculosis_H37Rv ERCP-ILIQLSTGVGLTVPFEQREQLVELRPRMATLNPCSMSFGAGEFRN * : : ::** * :: :. .*.: :::: Mflv_1802|M.gilvum_PYR-GCK P--GSPEVAELLLSRGIGVEIGLFHA---EAARAWAASEMTQHCMRVMIE Mvan_4947|M.vanbaalenii_PYR-1 P--GSPELARLLLSRGLGVEVGLFHA---DAARSWAASDVTQHCMRVMVE MSMEG_5614|M.smegmatis_MC2_155 P--GSPELAELLLSRGVGVEAGLFHA---DAARAWAASDMAAHCLRVMVE MAB_2923c|M.abscessus_ATCC_199 E--GAAEVAEALLNRGVGVEAGLWNE---AAALAWSRSPLRRDCFRVLLE Mb1746|M.bovis_AF2122/97 PPQAVRRLAARMRELDIKPELEIYDTGHLEACLRLWAEDLLAEPLQFSIV Rv1718|M.tuberculosis_H37Rv PPQAVRRLAARMRELDIKPELEIYDTGHLEACLRLWAEDLLAEPLQFSIV . .:* : . .: * ::. *. . : . ::. : Mflv_1802|M.gilvum_PYR-GCK LG-ADGDVSRADEILGVVDGARSP--APVLLHGLDESCWPLLEHAGVRRI Mvan_4947|M.vanbaalenii_PYR-1 LG-ADGDTTTADELLGIVATAGSP--APVLLHGLDESCWPLLEHARVRGV MSMEG_5614|M.smegmatis_MC2_155 LS-PDAGTGTADELLAIVTSAGSQ--APALLHGLDESAWPLLQHAGQCGV MAB_2923c|M.abscessus_ATCC_199 LPGGVAGTAVEEQAMRMLTQVRISGAVDVLLHGEDSSAWPMLDLAAARGV Mb1746|M.bovis_AF2122/97 LGVRGGMAATADNLLTMVRRLPPG------RSGKS--------------- Rv1718|M.tuberculosis_H37Rv LGVRGGMAATADNLLTMVRRLPPGAIWQVIAIGKAN--MELTAMGLALGG * . . :: : :: * Mflv_1802|M.gilvum_PYR-GCK QARIGLEDTVCLPDGSVADGNAALVAAALELLSR---------------- Mvan_4947|M.vanbaalenii_PYR-1 QTRIGMEDTLVLPDGSTAEGNAALVAAAVELLSR---------------- MSMEG_5614|M.smegmatis_MC2_155 QTRIGMEDTLRLPDGTVADDNAALVTAAVELLSR---------------- MAB_2923c|M.abscessus_ATCC_199 AARIGLEDTLRLPEGTTAASNAELVAAGHGRIRTATTREVC--------- Mb1746|M.bovis_AF2122/97 -------------------------SRSVRPTWN---------------- Rv1718|M.tuberculosis_H37Rv NARVGLEDTLYLRKGELAPSNLALVSRTIRLAEALDLPIASVEEAEAALQ : Mflv_1802|M.gilvum_PYR-GCK ----- Mvan_4947|M.vanbaalenii_PYR-1 ----- MSMEG_5614|M.smegmatis_MC2_155 ----- MAB_2923c|M.abscessus_ATCC_199 ----- Mb1746|M.bovis_AF2122/97 ----- Rv1718|M.tuberculosis_H37Rv LPGTS