For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSIVITVAPTGPIATKADNPALPTSPEEIATAVEQAYHAGAAVAHIHLRDENERPTADPNIARRAMDLIG ERCPILIQLSTGVGLTVPFEQREQLVELRPRMATLNPCSMSFGAGEFRNPPQAVRRLAARMRELDIKPEL EIYDTGHLEACLRLWAEDLLAEPLQFSIVLGVRGGMAATADNLLTMVRRLPPGAIWQVIAIGKANMELTA MGLALGGNARVGLEDTLYLRKGELAPSNLALVSRTIRLAEALDLPIASVEEAEAALQLPGTS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1718 | - | - | 100% (272) | hypothetical protein Rv1718 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1746 | - | 1e-108 | 100.00% (193) | hypothetical protein Mb1746 |
| M. gilvum PYR-GCK | Mflv_1802 | - | 4e-08 | 24.58% (240) | hypothetical protein Mflv_1802 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2923c | - | 1e-09 | 25.00% (236) | hypothetical protein MAB_2923c |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6373 | - | 3e-38 | 33.33% (300) | hypothetical protein MSMEG_6373 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4947 | - | 7e-10 | 25.83% (240) | hypothetical protein Mvan_4947 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1802|M.gilvum_PYR-GCK ---------------MADNPFRD------TGTIYLKACVNG-ARTPDHHP
Mvan_4947|M.vanbaalenii_PYR-1 MKRSASECTRPPPHIKRPTPNGDKMGDMVTAGVYLKACING-ARTPDQHP
MAB_2923c|M.abscessus_ATCC_199 --------------------------------MYLKACLNG-VRRKDQHP
Rv1718|M.tuberculosis_H37Rv ----------------------------MS--IVITVAPTGPIATKADNP
Mb1746|M.bovis_AF2122/97 ----------------------------MS--IVITVAPTGPIATKADNP
MSMEG_6373|M.smegmatis_MC2_155 ------------------------MNQSMNDKVIITCAVTGGMTVPAQSK
: :. . .* .
Mflv_1802|M.gilvum_PYR-GCK NLPVTPDQLAAEAVAVHAAGAKAVHMHPKGADGRDSLRAEEVDAAVAAVR
Mvan_4947|M.vanbaalenii_PYR-1 RLPVTPDQLAAEAVAAHRAGASAVHMHPKTADGVDSLLAREVDAAVAAVR
MAB_2923c|M.abscessus_ATCC_199 AIPCTAEEIAADAAACRDAGAAAVHVHAKDAQGFDSLLASAIDPVVAALR
Rv1718|M.tuberculosis_H37Rv ALPTSPEEIATAVEQAYHAGAAVAHIHLRDENE-RPTADPNIARRAMDLI
Mb1746|M.bovis_AF2122/97 ALPTSPEEIATAVEQAYHAGAAVAHIHLRDENE-RPTADPNIARRAMDLI
MSMEG_6373|M.smegmatis_MC2_155 AIPITVDEIVRAGVEAAEAGAAVLHVHVREETTGRPVADLDLFERALTEL
:* : :::. *** . *:* : . : .
Mflv_1802|M.gilvum_PYR-GCK EALPGLPLGVTTGFWALPDAQQRLEAIEEWSILPDFASVNWHEPGS----
Mvan_4947|M.vanbaalenii_PYR-1 HTLPGLPLGVTTGYWALPDAEQRLRAVESWSVLPDFASLNWHEPGS----
MAB_2923c|M.abscessus_ATCC_199 ARCPGLPVGVTTGAWALADPAARCAAINGWTELPDFASVNWHEEGA----
Rv1718|M.tuberculosis_H37Rv GERCPILIQLSTGVGLTVPFEQREQLVELRPRMATLNPCSMSFGAG----
Mb1746|M.bovis_AF2122/97 GERCPILIQLSTGVGLTVPFEQREQLVELRPRMATLNPCSMSFGAG----
MSMEG_6373|M.smegmatis_MC2_155 KKNTDAVIQPTTGGGRGMTVEERASVLKFRPEMATFNAGSFNFGLFPVAA
: :** * :: . :. : . .
Mflv_1802|M.gilvum_PYR-GCK ----------------------------PEVAELLLSRGIGVEIGLFHAE
Mvan_4947|M.vanbaalenii_PYR-1 ----------------------------PELARLLLSRGLGVEVGLFHAD
MAB_2923c|M.abscessus_ATCC_199 ----------------------------AEVAEALLNRGVGVEAGLWNEA
Rv1718|M.tuberculosis_H37Rv -------------------EFRNPPQAVRRLAARMRELDIKPELEIYDTG
Mb1746|M.bovis_AF2122/97 -------------------EFRNPPQAVRRLAARMRELDIKPELEIYDTG
MSMEG_6373|M.smegmatis_MC2_155 RDLPFADWERDYLEGTTDYIFKNTFADMTYMAEQMRQSETRPEIEVYDVG
:* : . * ::.
Mflv_1802|M.gilvum_PYR-GCK AARAWA---ASEMTQHCMRVMIEL-GADGDVSRADEILGVVDGARSP--A
Mvan_4947|M.vanbaalenii_PYR-1 AARSWA---ASDVTQHCMRVMVEL-GADGDTTTADELLGIVATAGSP--A
MAB_2923c|M.abscessus_ATCC_199 AALAWS---RSPLRRDCFRVLLELPGGVAGTAVEEQAMRMLTQVRISGAV
Rv1718|M.tuberculosis_H37Rv HLEACLRLWAEDLLAEPLQFSIVLGVRGGMAATADNLLTMVR---RLPPG
Mb1746|M.bovis_AF2122/97 HLEACLRLWAEDLLAEPLQFSIVLGVRGGMAATADNLLTMVR---RLPPG
MSMEG_6373|M.smegmatis_MC2_155 HIYNLEQLVKDGVLEPPFNLQFVLGVLGANAAEPDQLIHMLRTAERVFGR
. : :.. . * . .: :: : ::
Mflv_1802|M.gilvum_PYR-GCK PVLLHGLDESCWP----LLEHAGVRRIQARIGLEDTVCLPDGSVADGNAA
Mvan_4947|M.vanbaalenii_PYR-1 PVLLHGLDESCWP----LLEHARVRGVQTRIGMEDTLVLPDGSTAEGNAA
MAB_2923c|M.abscessus_ATCC_199 DVLLHGEDSSAWP----MLDLAAARGVAARIGLEDTLRLPEGTTAASNAE
Rv1718|M.tuberculosis_H37Rv AIWQVIAIGKANM---ELTAMGLALGGNARVGLEDTLYLRKGELAPSNLA
Mb1746|M.bovis_AF2122/97 ------RSGKS---------------------------------------
MSMEG_6373|M.smegmatis_MC2_155 DAFTWSAAGVGYRGEFGLAALSLILGGNVRVGLEDNLRITRTENATSNAQ
Mflv_1802|M.gilvum_PYR-GCK LVAAALELLSR-------------------------
Mvan_4947|M.vanbaalenii_PYR-1 LVAAAVELLSR-------------------------
MAB_2923c|M.abscessus_ATCC_199 LVAAGHGRIRTATTREVC------------------
Rv1718|M.tuberculosis_H37Rv LVSRTIRLAEALDLPIASVEEAEAALQLPGTS----
Mb1746|M.bovis_AF2122/97 --SRSVRPTWN-------------------------
MSMEG_6373|M.smegmatis_MC2_155 LVRKAVDLAATFDRAPATPDEARQFLGLKGAAAVGF