For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TNTDMTTIETNTGTTTLITQNAIEQFLYREARYLDDREFEKWLDCYADDVVYWMPAWTDDDKLVEDPQRD ISLIYYSNKGGLEDRVFRIRTERSSATSLPEPRTSHNISNVEVIERRGDIVDVRFNWHTMYFRYKTVDPY YGTSFYTIDFGGEQPLIRRKTVVLKNDYIHHVVDVYHF*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1354 | - | - | 100% (179) | 2-chlorobenzoate 1,2-dioxygenase |
| M. gilvum PYR-GCK | Mflv_0536 | - | 7e-10 | 32.54% (126) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
| M. gilvum PYR-GCK | Mflv_0663 | - | 3e-09 | 35.59% (118) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4367c | - | 1e-07 | 34.04% (94) | biphenyl dioxygenase beta subunit |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_5083 | - | 2e-14 | 31.13% (151) | beta subunit of hydroxylase component of benzoate |
| M. smegmatis MC2 155 | MSMEG_1907 | - | 2e-92 | 90.23% (174) | toluate 1,2-dioxygenase beta subunit |
| M. thermoresistible (build 8) | TH_3344 | - | 9e-13 | 39.13% (92) | PUTATIVE beta subunit of hydroxylase component of benzoate |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0547 | - | 8e-10 | 32.54% (126) | aromatic-ring-hydroxylating dioxygenase, beta subunit |
CLUSTAL 2.0.9 multiple sequence alignment
MAB_4367c|M.abscessus_ATCC_199 -----MDAKIIPGALADRDTHFDVAQFYYSEAELLDEGRYVDWLELLADD
Mvan_0547|M.vanbaalenii_PYR-1 ---------MVATVEQQLLLRCEMENFLFEEAELLNDGRFHDWLELCAED
MAV_5083|M.avium_104 MTASTTSAPGDLGPIPEGFDRFEVEQFVYREARYADENDYDRWEALWTDD
TH_3344|M.thermoresistible__bu -----------VAPVPDWVDRFEVEQFLFREARYADESEYDAWEALWTDD
Mflv_1354|M.gilvum_PYR-GCK MTNTDMTTIETNTGTTTLITQNAIEQFLYREARYLDDREFEKWLDCYADD
MSMEG_1907|M.smegmatis_MC2_155 -----MTTTEK---PAKLITQNLIEQFLYREARYLDDREFEKWLECYADD
: : :* : **. :: : * ::*
MAB_4367c|M.abscessus_ATCC_199 VDYWMPLRTNRLRRQQALSVAARGEAAYYDETKESLAWRIRRFDSGMAWA
Mvan_0547|M.vanbaalenii_PYR-1 IHYVIPVRVS---RERANGDGNSTTMTHWDDDYAGLELRVLRLDTEYAWA
MAV_5083|M.avium_104 ALYWVPAGPD--------TADPMRRMSVIFDNRSRISTRLKQVRTGRRYA
TH_3344|M.thermoresistible__bu ALYWVPVDGA--------DSDPRRQMSVIYDNRSRISTRLNHARTGRRYA
Mflv_1354|M.gilvum_PYR-GCK VVYWMPAWTD---DDKLVEDPQRDISLIYYSNKGGLEDRVFRIRTERSSA
MSMEG_1907|M.smegmatis_MC2_155 VVYWMPSWAD---DDRLVEDPQRDISLIYYANKGGLEDRVFRIRTERSSA
* :* : *: : : *
MAB_4367c|M.abscessus_ATCC_199 EDPP-SRTRHLITNISVRYAEPDKGAEACDLVARSAFLVYRNRLEREENI
Mvan_0547|M.vanbaalenii_PYR-1 EDPP-SRIRHHVSNVRVR-----PGAGTDEYDVRSNLLVFRNRGDSPQHD
MAV_5083|M.avium_104 QAPP-SHVRRLVTNIEWLGGRPNPGGG-ADLEVGANFMALESRAR--DSH
TH_3344|M.thermoresistible__bu ASPP-SNLRRLISNIEYVCGRANPDGG-LDVEVEANVLIFESRIR--ENR
Mflv_1354|M.gilvum_PYR-GCK TSLPEPRTSHNISNVEVIE----RRGDIVDVRFNWHTMYFRYKTV----D
MSMEG_1907|M.smegmatis_MC2_155 TSLPEPRTSHNISNVEVIE----RRGDLVDVRFNWHTMYFRYKTV----D
* .. : ::*: . : : . :
MAB_4367c|M.abscessus_ATCC_199 FAGARTDSLRRVDDHRFLIARRFILLDQNILQAKNICTFF
Mvan_0547|M.vanbaalenii_PYR-1 LISAERHDVIRRSEMGLRLASRRVVLDHAVVGTHNLANFF
MAV_5083|M.avium_104 LWGGRTTYRIRRVGDELRLAYKKVVLVDNDKPIPTLGFLI
TH_3344|M.thermoresistible__bu LWGGRVTYRIRKTPDGLRLAYKKVVLVDNDKPLPTLSFLI
Mflv_1354|M.gilvum_PYR-GCK PYYGTSFYTIDFGGEQPLIRRKTVVLKNDYIHHVVDVYHF
MSMEG_1907|M.smegmatis_MC2_155 PYYGTSFYTIDFSGEQPLIRRKTVVLKNDYIHHVVDIYHF
. : : ::* . :