For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TQTLESTERVKIYKAFPEFYDAMMNLSATSAKDFDHTIGELVKIRASQINRCGFCLDMHARDARKQGETE QRLALIAAWEEAGDLFTEREQAALALTEAVTEINRGPVSDDVYERAAAVFSERELSQLIAMIVTINAWNR INVTVKMPFPRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6370 | pcaC | - | 100% (153) | 4-carboxymuconolactone decarboxylase |
M. smegmatis MC2 155 | MSMEG_5319 | - | 5e-21 | 39.16% (143) | alkylhydroperoxidase AhpD core |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1182 | - | 5e-55 | 67.32% (153) | alkylhydroperoxidase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0197 | - | 6e-47 | 61.04% (154) | putative alkylhydroperoxidase AhpD core |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2093 | - | 9e-07 | 30.16% (126) | hypothetical protein MAV_2093 |
M. thermoresistible (build 8) | TH_1616 | pcaC | 3e-26 | 56.36% (110) | 4-carboxymuconolactone decarboxylase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5624 | - | 1e-58 | 70.59% (153) | alkylhydroperoxidase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1182|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5624|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_6370|M.smegmatis_MC2_155 -------------------------------------------------- MAB_0197|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1616|M.thermoresistible__bu -------------------------------------------------- MAV_2093|M.avium_104 MAAPVSLREDQLTRLVAVFPGSPSEARVAALIRRVCAQTSSLPPLPAPME Mflv_1182|M.gilvum_PYR-GCK -----------MGHCGPTVDDMTQTLATRSRLKIYK-------------- Mvan_5624|M.vanbaalenii_PYR-1 -------MNHLRGPVGASVEDMTQTLTTQDRLKIYK-------------- MSMEG_6370|M.smegmatis_MC2_155 ---------------------MTQTLESTERVKIYK-------------- MAB_0197|M.abscessus_ATCC_1997 ---------------------MTSTLNS-PRIRMDK-------------- TH_1616|M.thermoresistible__bu -------------VDRNSAVPQTPEVTMDARINLLDNP------------ MAV_2093|M.avium_104 VGEPESETEAAVAEFAEQFSADVSAITHAQRSRLSKQLGDRTFGVVVQMY . : * .: . Mflv_1182|M.gilvum_PYR-GCK ---ASPELYDAMMVLSTAA------------------------------- Mvan_5624|M.vanbaalenii_PYR-1 ---ASPELYDAMMTLSTAA------------------------------- MSMEG_6370|M.smegmatis_MC2_155 ---AFPEFYDAMMNLSATS------------------------------- MAB_0197|M.abscessus_ATCC_1997 ---VSPEVYEAMMALSIAS------------------------------- TH_1616|M.thermoresistible__bu ---LGAKFLKHLVAANAVID------------------------------ MAV_2093|M.avium_104 IADFVPRVRAGLDALEVGSRYLGWLSGPISWDYGSDPSDLVFNDFLIAVA ... : . Mflv_1182|M.gilvum_PYR-GCK -AKDVDPALGELIKIRASQMNRCAFCLDMHTRDARKIGVSEQKLDLLSAW Mvan_5624|M.vanbaalenii_PYR-1 -AKDVDPELAELIKIRASQLNHCAFCLDMHTRDARKAGVGEQKLDVLAAW MSMEG_6370|M.smegmatis_MC2_155 -AKDFDHTIGELVKIRASQINRCGFCLDMHARDARKQGETEQRLALIAAW MAB_0197|M.abscessus_ATCC_1997 -AKDVEPSLAELIKIRASQLNHCAFCLDMHTHDARKQGETEQRIYLLNAW TH_1616|M.thermoresistible__bu -GSSLPAATRELVKIRASQINGCAFCLDMHTKDAAHAGETATRLHLVAAW MAV_2093|M.avium_104 RMRALDPVTSELVRLRGAAQHHCRLCNSLREGSALDAGGSETLYEEIERF . **:::*.: : * :* .:: .* . * : : Mflv_1182|M.gilvum_PYR-GCK AEAAGVFDDAERAALALTEAITELGH-AGVSDDVYEDAAAVFSDRELGQV Mvan_5624|M.vanbaalenii_PYR-1 TEAGELFGERERAALALTEAVTELGR-DGVPDDVYARAAAVFSDRELGQV MSMEG_6370|M.smegmatis_MC2_155 EEAGDLFTEREQAALALTEAVTEINR-GPVSDDVYERAAAVFSERELSQL MAB_0197|M.abscessus_ATCC_1997 AEAGDIYTDREKAALALTEEATVLSAGEHVSDATYARAAAEFTERELGQI TH_1616|M.thermoresistible__bu REA-TVFTEAERAALELAEQGTRLADGGGVTDDAWARAAKHHDEEQLAAL MAV_2093|M.avium_104 ESS-GLLDERAKAALRYTDALIWTPA-HLVADDVAEVRSRFSEAEAVELT .: : : :*** :: *.* . : . : Mflv_1182|M.gilvum_PYR-GCK IAMAVTINAWNRINAAVRTPP----PRR------------ Mvan_5624|M.vanbaalenii_PYR-1 IAMVVTINAWNRINVAVRMPI----PRR------------ MSMEG_6370|M.smegmatis_MC2_155 IAMIVTINAWNRINVTVKMPF----PRR------------ MAB_0197|M.abscessus_ATCC_1997 IGMILTINAWNRIAVTTRNAP----VRRG----------- TH_1616|M.thermoresistible__bu VGLIVLINAFNRGNVIVGQPAGDYQPGQFG---------- MAV_2093|M.avium_104 FDIMRNASNKVAVSLAADAPRVENGTQRYLIGADGQTVFS . : . . . :