For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
HRHDDDDLTDAQRRALRLEIAVVLAVTFGLSAYTALLSLTEGVLLGLADRTVALNPSRSPFDLIDLGRNL ASLLQLVAWGALAIYLLWRSGDGPARIGLARIRWRQDILGGVGLAMLIGIPGLALYQLARLIGANASVEP AELNDTWWRIPVLLLLAFGNGWAEEIVVVGFLLTRLRQLKVNPWTALVISSLLRGAYHLYQGFGAGLGNI AMGLVFGYVWQRTGRLWPLIVAHTLIDVVAFVGYSLLAGRLGWLL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1143 | - | - | 100% (256) | abortive infection protein |
| M. gilvum PYR-GCK | Mflv_2806 | - | e-104 | 73.09% (249) | abortive infection protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0129c | - | 1e-88 | 62.20% (246) | abortive infection protein |
| M. marinum M | MMAR_0147 | - | 8e-07 | 26.90% (171) | hypothetical protein MMAR_0147 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_6420 | - | 1e-100 | 73.14% (242) | abortive infection protein |
| M. thermoresistible (build 8) | TH_1470 | - | 1e-104 | 72.69% (249) | abortive infection protein |
| M. ulcerans Agy99 | MUL_4950 | - | 8e-06 | 25.14% (175) | hypothetical protein MUL_4950 |
| M. vanbaalenii PYR-1 | Mvan_5664 | - | 1e-126 | 84.86% (251) | abortive infection protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1143|M.gilvum_PYR-GCK ----MHRHDDDDLTDAQRRALRLEIAVVLAVTFGLSAYTALLSLTEGVLL
Mvan_5664|M.vanbaalenii_PYR-1 ----MSATDDE-PTDAQRRALRIEIAVVLAVTFALSAYTALLSLIESVLL
MSMEG_6420|M.smegmatis_MC2_155 MTGPLEHREHSEHRQPSRRTIKIEIVVVLAVTFGLSAYTALLRLIEAVLL
TH_1470|M.thermoresistible__bu -----VSGPAEELTAPQRRALRLEIAVVLLVTFGLTAYSALLRLTESVLL
MAB_0129c|M.abscessus_ATCC_199 ----------MAESEMSARTIRLEIAIVLAISFGMSAFSAILQFASAVLM
MMAR_0147|M.marinum_M -------MLPTSSSTPDAPALRPTAAPAHRWGLGAFVLVELVYLLSSTLL
MUL_4950|M.ulcerans_Agy99 ------------------------------------------------ML
::
Mflv_1143|M.gilvum_PYR-GCK GLADRTVALNPSRSPFDLIDLGRNLASLLQLVAWGALAIYLLWRSGDGP-
Mvan_5664|M.vanbaalenii_PYR-1 GLSGQTIALNPTRSPFDLIDLGLNLARLFQLLAWGALAVYLLWRSGDGP-
MSMEG_6420|M.smegmatis_MC2_155 GLSGQTVALNPRRSPFDLIDLGLHLAGVFNLLAWGALALYLLWRSGIGP-
TH_1470|M.thermoresistible__bu GLSGQIVALNPRRSQFSLIDLGLNLAAVFQLMGWGALALYLLWRSGSGP-
MAB_0129c|M.abscessus_ATCC_199 GLSGQRVALNPRRAELSLIDLGLNLVSITRLVAWGALAVYLLWRSGFRP-
MMAR_0147|M.marinum_M AL----VVASAGPRSAALISLAVAAPTVIAAG----LAVFITMRRGNGPR
MUL_4950|M.ulcerans_Agy99 AL----VVASAGPRSAALISLAVAAPTVIAAG----LAVFITMRRGNGPR
.* :. .. **.*. : **::: * * *
Mflv_1143|M.gilvum_PYR-GCK ARIGLARIRWRQDILG-GVGLAMLIG-IPGLALYQLARLIGANASVEP--
Mvan_5664|M.vanbaalenii_PYR-1 ARIGLGRICWRRDLLG-GVGLAMLIG-VPGLALYQIARILGLNASVEP--
MSMEG_6420|M.smegmatis_MC2_155 KAIGLGRPQARADGLG-GLALAALIG-LPGLGFYVVARILGLSADVEP--
TH_1470|M.thermoresistible__bu ARIGLGRLRWRPDLLG-GLGLAALIG-LPGIGLYLAARALGLSAAVEP--
MAB_0129c|M.abscessus_ATCC_199 SSVGLGRWRWRADGLG-ALGLAALIG-LPGLALYVGARWMGMSVQVIP--
MMAR_0147|M.marinum_M TDLRLGG-TWRDVRLGLVFGLGGLVVSVPASMLYASITGPDANSALYKVF
MUL_4950|M.ulcerans_Agy99 TDLRMGG-TWRDVRLGLVFGLGGLVVSVAASMLYASITGPDANSALYKVF
: :. * ** ..*. *: :.. :* . . :
Mflv_1143|M.gilvum_PYR-GCK AELNDTW-WRIPVLLLLAFGNGWAEEIVVVGFLLTRLRQLKVNPWTALVI
Mvan_5664|M.vanbaalenii_PYR-1 AELNDTW-WRIPLLLLLSFGNGWAEEVIVVGFLLTRLRQLRVNPWLALVI
MSMEG_6420|M.smegmatis_MC2_155 AELYDTW-WRIPVLLGSAFANGWAEEIIVVGFLLTRLRQLDISPTRALVL
TH_1470|M.thermoresistible__bu AELYDTW-WRIPVLLAIAFANGWAEEIVVVGFLVTRLRQLRVTPVAAVLA
MAB_0129c|M.abscessus_ATCC_199 ASLDDTW-WRLPVLVLSAFANGWAEEVVVIAYLQTRLHQLGYGTAAAIVS
MMAR_0147|M.marinum_M GDVRASWPWAVAVFIVVVFVGPLCEEILYRGLLWGALERR-WGQWVALVV
MUL_4950|M.ulcerans_Agy99 GDVRASWPWAVAVFIVVVFVGPLCEEILYRGLLWGALERR-WGQWVALVV
..: :* * :.::: * . .**:: . * *.: *::
Mflv_1143|M.gilvum_PYR-GCK SSLLRGAYHLYQGFGAGLGNIAMGLVFGYVWQRTGRLWPLIVAHTLIDVV
Mvan_5664|M.vanbaalenii_PYR-1 SSLLRGLYHLYQGFGAGLGNVAMGLVFGYTWQRTGRLWPLIIAHTLIDAV
MSMEG_6420|M.smegmatis_MC2_155 SALLRGAYHLYQGYSAGPGNLVMGLVFGYAWQRTGRLWPLIIAHTLIDAV
TH_1470|M.thermoresistible__bu SSLLRGAYHLYQGFSAGLGNLVMGLIFGWLYLRTGRLWPLIVAHAVIDAV
MAB_0129c|M.abscessus_ATCC_199 SALLRGCYHLYQGVSAGVGNLAMGVVFGYVWHRTGRLWPLVVAHGVIDTV
MMAR_0147|M.marinum_M STAVFALAHF--EFTRAPLLLVIAVPIALARLYSGGLWASIVAHQVTNSL
MUL_4950|M.ulcerans_Agy99 STAVFALAHF--EFTRAPLLLVIAVPIALARLYSGGLWASIAAHQVTNSL
*: : . *: . :.:.: :. :* **. : ** : : :
Mflv_1143|M.gilvum_PYR-GCK AFVGYSLLAGRLGWLL
Mvan_5664|M.vanbaalenii_PYR-1 AFVGYSLLHGRLGWLI
MSMEG_6420|M.smegmatis_MC2_155 AFVGYALLAQHLGWLR
TH_1470|M.thermoresistible__bu AFVGYALAADHLTWLT
MAB_0129c|M.abscessus_ATCC_199 AFVGYALLRDHLGWLH
MMAR_0147|M.marinum_M PGLVLMLILTGTMPAS
MUL_4950|M.ulcerans_Agy99 PGLVLMLILTGTMPAS
. : *