For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LPTSSSTPDAPALRPTAAPAHRWGLGAFVLVELVYLLSSTLLALVVASAGPRSAALISLAVAAPTVIAAG LAVFITMRRGNGPRTDLRLGGTWRDVRLGLVFGLGGLVVSVPASMLYASITGPDANSALYKVFGDVRASW PWAVAVFIVVVFVGPLCEEILYRGLLWGALERRWGQWVALVVSTAVFALAHFEFTRAPLLLVIAVPIALA RLYSGGLWASIVAHQVTNSLPGLVLMLILTGTMPAS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_0147 | - | - | 100% (247) | hypothetical protein MMAR_0147 |
| M. marinum M | MMAR_2740 | - | 2e-06 | 24.27% (239) | hypothetical protein MMAR_2740 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0677c | - | 1e-93 | 68.86% (228) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_2806 | - | 2e-07 | 28.50% (207) | abortive infection protein |
| M. tuberculosis H37Rv | Rv0658c | - | 1e-92 | 68.42% (228) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2920c | - | 3e-08 | 32.84% (134) | putative abortive infection protein |
| M. avium 104 | MAV_2856 | - | 9e-06 | 24.88% (217) | caax amino protease family protein |
| M. smegmatis MC2 155 | MSMEG_3474 | - | 1e-68 | 61.75% (217) | integral membrane protein |
| M. thermoresistible (build 8) | TH_1470 | - | 1e-06 | 26.47% (238) | abortive infection protein |
| M. ulcerans Agy99 | MUL_4950 | - | 1e-112 | 98.54% (206) | hypothetical protein MUL_4950 |
| M. vanbaalenii PYR-1 | Mvan_3716 | - | 1e-06 | 27.54% (207) | abortive infection protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0147|M.marinum_M ---MLPTSSSTPDAPALRPTAAPAHRWGLGAFVLVELVYLLSSTLLALVV
MUL_4950|M.ulcerans_Agy99 --------------------------------------------MLALVV
Mb0677c|M.bovis_AF2122/97 ------------MEAGRADTVAPSHRWGLGAFLVVELVFLVASTSLAVVL
Rv0658c|M.tuberculosis_H37Rv ------------MEAGRADTVAPSHRWGLGAFLVVELVFLVASTSLAVVL
MSMEG_3474|M.smegmatis_MC2_155 --------------------------------MLVEVVYLAVSGAFALAA
Mflv_2806|M.gilvum_PYR-GCK MWTRQATVASVNAPDALTDDQRQPLRIEIVVVLMVTFALSAYTAILDLIE
Mvan_3716|M.vanbaalenii_PYR-1 -------MASVNAPDALTDDQRRPLQIEIVVVLMVTFALSAYTAILDLID
TH_1470|M.thermoresistible__bu ---------VSGPAEELTAPQRRALRLEIAVVLLVTFGLTAYSALLRLTE
MAB_2920c|M.abscessus_ATCC_199 ----------------MESGPARPGWLELGVAAATAVFLYLVGGVAAYFV
MAV_2856|M.avium_104 -----------------MRDATATADLQASQPPGLHRFRIHLDIAVVVVV
MMAR_0147|M.marinum_M ASAGPRSAALISLAVAAPTVIAAGLAVFITMRRGNGPRTDLRLGGTWRDV
MUL_4950|M.ulcerans_Agy99 ASAGPRSAALISLAVAAPTVIAAGLAVFITMRRGNGPRTDLRMGGTWRDV
Mb0677c|M.bovis_AF2122/97 TGHGPVSAGVLALALAAPTVVAAGLAILITRLRGNGPRTDLRLRWSWRGL
Rv0658c|M.tuberculosis_H37Rv TGHGPVSAGVLALALAAPTVVAAGLAILITRLRGNGLRTDLRLRWSWRGL
MSMEG_3474|M.smegmatis_MC2_155 ARAEP-PVGLILVTIAVPTVLAASLAVLIARIRGNGARTDFRLRWSWREL
Mflv_2806|M.gilvum_PYR-GCK AVLLGLAGQTVALNPRRSSFDLIDLGLNLATVFQLVAWGFLAVYLLWRSG
Mvan_3716|M.vanbaalenii_PYR-1 AVLLGLAGQTVALNPRRSSFDLIDLGLNLATVFQLVAWGFLAVYLLWRSG
TH_1470|M.thermoresistible__bu SVLLGLSGQIVALNPRRSQFSLIDLGLNLAAVFQLMGWGALALYLLWRSG
MAB_2920c|M.abscessus_ATCC_199 SEDFPIALGHVNFLISGLAPLGAFAVAVLVRIRDVRPFGLRHTSLLW--L
MAV_2856|M.avium_104 LVLTNLVAHFTTPWASIGTVPAAAVGLVILMRYRGLGWTDLGLGRDHWKS
:
MMAR_0147|M.marinum_M RLGLVFGLG------------GLVVSVPASMLYASITGPDANSALYKVFG
MUL_4950|M.ulcerans_Agy99 RLGLVFGLG------------GLVVSVAASMLYASITGPDANSALYKVFG
Mb0677c|M.bovis_AF2122/97 RLGLMFGFG------------GMLVTIPASLVYTAIVGPEANSAVVRIFG
Rv0658c|M.tuberculosis_H37Rv RLGLMFGFG------------GMLVTIPASLVYTAIVGPEANSAVVRIFG
MSMEG_3474|M.smegmatis_MC2_155 WIGIAFGFG------------GLFVTLPAAALYLSIVGSDTTSAVGEVFE
Mflv_2806|M.gilvum_PYR-GCK FGPAAIGLGRPRYRLDLLGGIGLAALIGLPGLALYVTARALGLSASVVPS
Mvan_3716|M.vanbaalenii_PYR-1 FGPGAIGLGRPRYRLDLLGGIGLAALIGLPGLALYVTARALGLSASVVPS
TH_1470|M.thermoresistible__bu SGPARIGLGRLRWRPDLLGGLGLAALIGLPGIGLYLAARALGLSAAVEPA
MAB_2920c|M.abscessus_ATCC_199 LTGVVIGLV------------CFGLSWPVSAIFDPLFPGSEGVQQPYRDA
MAV_2856|M.avium_104 GVGYALAAV---------------AVVAAVIAIGVLLPATRPMFMNNRYA
:. :
MMAR_0147|M.marinum_M DVRASWPWAVAVFIVVVFVGPLCEEILYRGLLWGALERRWGQWVALVVST
MUL_4950|M.ulcerans_Agy99 DVRASWPWAVAVFIVVVFVGPLCEEILYRGLLWGALERRWGQWVALVVST
Mb0677c|M.bovis_AF2122/97 GVRASWPWALVVFLVVVFVAPLCEEIIYRGLLWGAVDRRWGRWAALVVTT
Rv0658c|M.tuberculosis_H37Rv GVRASWPWALVVFLVVVFVAPLCEEIIYRGLLWGAVDRRWGRWAALVVTT
MSMEG_3474|M.smegmatis_MC2_155 GVRATWPLALAVFATVTFVAPVCEEIVYRGLLWGALEQRWGRIVAALVST
Mflv_2806|M.gilvum_PYR-GCK ELNDTW-WRIPVLILVSFANAWAEEIIVVGFLLTRLHQLRVRPATALVLS
Mvan_3716|M.vanbaalenii_PYR-1 ELNDTW-WRIPILILVSFANAWAEEIIVVGFLLTRLHQLRVRPVTALVLS
TH_1470|M.thermoresistible__bu ELYDTW-WRIPVLLAIAFANGWAEEIVVVGFLVTRLRQLRVTPVAAVLAS
MAB_2920c|M.abscessus_ATCC_199 ARSGAVPPIVAVGLGGILT-PLGEEALFRGVLATFLFR-WGSCVSVVFSA
MAV_2856|M.avium_104 TISGAM---IASMVVIPVQTVIPEELAFRGVLHGALNRAWGFRGVALAGS
: : . ** *.* : : : :
MMAR_0147|M.marinum_M AVFA---LAHFEFTRAPLLL-------------------------VIAVP
MUL_4950|M.ulcerans_Agy99 AVFA---LAHFEFTRAPLLL-------------------------VIAVP
Mb0677c|M.bovis_AF2122/97 VVFA---LAHLEFARAPLLV-------------------------VVAIP
Rv0658c|M.tuberculosis_H37Rv VVFA---LAHLEFARAPLLV-------------------------VVAIP
MSMEG_3474|M.smegmatis_MC2_155 VVFA---LAHFEPVRAPLLL-------------------------VVAIP
Mflv_2806|M.gilvum_PYR-GCK SLLRGTYHLYQGFSAGLGNV-------------------------VMGLV
Mvan_3716|M.vanbaalenii_PYR-1 SLLRGTYHLYQGFSAGLGNV-------------------------VMGLV
TH_1470|M.thermoresistible__bu SLLRGAYHLYQGFSAGLGNL-------------------------VMGLI
MAB_2920c|M.abscessus_ATCC_199 AVFA---VAHGINGVMPLAL-------------------------MIGLT
MAV_2856|M.avium_104 LLFG-LWHVATSFGLTSGNVGFTRLFGGGMVGMMAGVTGAVLATGAAGFV
:: : ..
MMAR_0147|M.marinum_M IALARLYSGGLWASIVAHQVTNSLPGLVLMLILTGTMPAS
MUL_4950|M.ulcerans_Agy99 IALARLYSGGLWASIAAHQVTNSLPGLVLMLILTGTMPAS
Mb0677c|M.bovis_AF2122/97 IALARFYSGGLLASIVTHQVTNLLPGIVLLLGLTGAISLP
Rv0658c|M.tuberculosis_H37Rv IALARFYSGGLLASIVTHQVTNLLPGIVLLLGLTGAISLP
MSMEG_3474|M.smegmatis_MC2_155 IAVARLYTDGLLAGIAAHQVTNLLPGLVLMYGLMGMTPA-
Mflv_2806|M.gilvum_PYR-GCK FGYAWRRTGRLWPLIIAHGVINTVAYVGYALVADRLNWLY
Mvan_3716|M.vanbaalenii_PYR-1 FGYTWQRTGRLWPLIIAHGVINTVAYVGYALVADRLNWLY
TH_1470|M.thermoresistible__bu FGWLYLRTGRLWPLIVAHAVIDAVAFVGYALAADHLTWLT
MAB_2920c|M.abscessus_ATCC_199 NGVLLWCSGSIWPAVMVHIAYNSAGIVYHGLGY-------
MAV_2856|M.avium_104 FSWLRRRSGSLIAPIALHWSLNGLGALAAAFVWHLST---
. :. : . : * : :