For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AASPRWQCDRAAGASGAIQFHGVITDEDGRPVPNVLIETWHAAGDDDNAATKIGRPRCDGRNYTRPKSVI TDQQGRYSMRMVPPRAPEHGAAPFIAVSVHTRGLLDRLITRAYLPGCHLAKDPLLRRLPAERRQALIATR DDIGLRFDITLRPAHGVRVETFVEPQQEAAT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0655 | - | - | 100% (172) | intradiol ring-cleavage dioxygenase |
M. gilvum PYR-GCK | Mflv_0529 | - | 1e-29 | 47.89% (142) | protocatechuate 3,4-dioxygenase, alpha subunit |
M. gilvum PYR-GCK | Mflv_0530 | - | 2e-05 | 26.71% (146) | protocatechuate 3,4-dioxygenase, beta subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3505 | pcaG | 2e-18 | 37.32% (142) | protocatechuate 3,4-dioxygenase, alpha subunit |
M. smegmatis MC2 155 | MSMEG_2602 | pcaG | 6e-32 | 50.71% (140) | protocatechuate 3,4-dioxygenase, alpha subunit |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0495 | - | 2e-97 | 98.84% (172) | intradiol ring-cleavage dioxygenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0655|M.gilvum_PYR-GCK ------------------MAASPRWQCDRAAGASGAIQFHGVITDEDGRP Mvan_0495|M.vanbaalenii_PYR-1 ------------------MAASPRWQCDRAAGASGAIQFHGVITDEDGRP MAV_3505|M.avium_104 -------------------MPYPGDARLVDDGDPRAVRLHGTVYDGVGAA MSMEG_2602|M.smegmatis_MC2_155 MSTLSATPGQTVGPFYGYALPIPGGNELVPPGSPGAIRLHGLVTDGAGAP . * * . *:::** : * * . Mflv_0655|M.gilvum_PYR-GCK VPNVLIETWHAAGDDDNAATKIGRPRCDGRNYTRPKSVITDQQGRYSMRM Mvan_0495|M.vanbaalenii_PYR-1 VPNVLIETWHAAGDDDNAATKIGRLRCDGRNYTLPKSVITDQQGRYSMRM MAV_3505|M.avium_104 VPDALVELWQPDGGG-RIVRQAGSLRRDPAVFTGWGRCATGEDGGYGFTT MSMEG_2602|M.smegmatis_MC2_155 VPDALLEIWQADADG-VVPTKTGSLRRDGWTFTGWGRAATDGAGRYSFTT **:.*:* *:. ... : * * * :* *. * *.: Mflv_0655|M.gilvum_PYR-GCK VPPRAPEHGAAPFIAVSVHTRGLLDRLITRAYLPGCHLAKDPLLRRLPAE Mvan_0495|M.vanbaalenii_PYR-1 VPPRAPEHGAAPFIAVSVHTRGLLDRLITRAYLPGCHLAKDPLLRRLPAE MAV_3505|M.avium_104 LAPGSVIDGRTPFFALTVFARGLLNRLFTRAYLPGAGPDTDPLLARVAPE MSMEG_2602|M.smegmatis_MC2_155 VEPGVSQTGSAPFIAMTVFARGLLNRLFTRVYLPGEHVATDPLLSSLPSG : * * :**:*::*.:****:**:**.**** .**** :.. Mflv_0655|M.gilvum_PYR-GCK RRQALIATRDDIG--LRFDITLRPAHGVRVETFVEPQQEAAT Mvan_0495|M.vanbaalenii_PYR-1 RRQALIATRDDIG--LRFDITLRPAHGVRVETFVEPQQEAAT MAV_3505|M.avium_104 RRTTLLCVAENGGRAYRFDIRLQ---GPGETVFLAYRTDGR- MSMEG_2602|M.smegmatis_MC2_155 RRDTLIAVPDEHG--LTFDIRLQ---GDRETVFLRFPGHTP- ** :*:.. :: * *** *: * .*: .