For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSSAVSHRVTHAHAHHPPAGARAAGIVLAITALLAVVTVAFALPATRSAPHDVPIGAAGPQSAGGRIADV LEQKAPGAFDVTFYPGEEALRDAIRRGDVYGGIALPGSPGDQPAMLIATQAGPAVAQVLTQLGTEISRQT GMPLTTEDLAPPTARDPRGVGLAASALPLTLAGILPAIALLLALRREVWIRYAAAVVFSGLAGITTAALL RFTLGAIDHNFWAVAAALSLGVAAAVLSVLGLGSLFGRAGLGAGAALALLVGNPLSGLASAPEMLPAGWG QFGQLLPQGATATLLRSAAAFGGAGATTAITVLTCWIVFGTALVAAAAVRARAVPAQ
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_0254 | - | - | 100% (337) | hypothetical protein Mflv_0254 |
| M. gilvum PYR-GCK | Mflv_3330 | - | 3e-18 | 28.57% (315) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_1497 | - | 4e-05 | 29.81% (104) | O-antigen polymerase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0720 | - | 1e-111 | 63.33% (330) | integral membrane protein |
| M. thermoresistible (build 8) | TH_2357 | - | 1e-107 | 61.95% (318) | integral membrane protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0640 | - | 1e-133 | 71.69% (332) | hypothetical protein Mvan_0640 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0254|M.gilvum_PYR-GCK MSSAVSHR--VTHAHAHHPPAGARAAGIVLAITALLAVVTVAFALPATRS
Mvan_0640|M.vanbaalenii_PYR-1 MASSVTSP--RHTVTVHEPPAAARAAGIIVAITALLALVAIAFALPAARS
MSMEG_0720|M.smegmatis_MC2_155 MSTATAP--AQHAAPAHEPPAAVRVTGIIVVVTIAIVIFAIAFALPATRA
TH_2357|M.thermoresistible__bu MTTQSAPPNDRSTIRRHEQPAAVRATGIVVVLTVAIAIIAIAFAWPASRS
*:: : *. **..*.:**::.:* :.:.::*** **:*:
Mflv_0254|M.gilvum_PYR-GCK APHDVPIGAAGPQSAGGRIADVLEQKAPGAFDVTFYPGEEALRDAIRRGD
Mvan_0640|M.vanbaalenii_PYR-1 GPHHVPIGAAGPQVASGQISTVLDAKMPGAFEVTFYPGEAALADAIRNRD
MSMEG_0720|M.smegmatis_MC2_155 KPVDVPIGVAGPQAATSQVAERLEQQAPGAFAVTYYPGEQALRGAILDRN
TH_2357|M.thermoresistible__bu APGDLPIGVAAPPPVTAQITARLAEQAPDAFDVRAFDDDAALRAAIRDRE
* .:***.*.* . .::: * : *.** * : .: ** ** :
Mflv_0254|M.gilvum_PYR-GCK VYGGIALPGSPGDQPAMLIATQAGPAVAQVLTQLGTEISRQTGMPLTTED
Mvan_0640|M.vanbaalenii_PYR-1 VYGGFVMPAQPGQPPALLLASGGSPMVAQLLTQIGAELSRQTGTALRTED
MSMEG_0720|M.smegmatis_MC2_155 VYGGIAFGPEG---PALLTATGASPAVAQLLTQIGSGISAQSGIALRTED
TH_2357|M.thermoresistible__bu VYGGLSIGAGP---PTLLIATGGSPAVAQLLTQMAGGIAEQSGMPLRTED
****: : *::* *: ..* ***:***:. :: *:* .* ***
Mflv_0254|M.gilvum_PYR-GCK LAPPTARDPRGVGLAASALPLTLAGILPAIALLLALRREVWIRYAAAVVF
Mvan_0640|M.vanbaalenii_PYR-1 LAPPTARDPRGAALAASALPITLAGILPAIALVLALRREVWTGFAAAVVF
MSMEG_0720|M.smegmatis_MC2_155 LAPPTSGDPRGTGLAASALPITLAGLLPAFALVLALKHEVWTRLIAMIAF
TH_2357|M.thermoresistible__bu LAAPPPDDPRGVGLAASALPITLAGLLPAIALVLALRREVWTRFAATVVF
**.*.. ****..*******:****:***:**:***::*** * :.*
Mflv_0254|M.gilvum_PYR-GCK SGLAGITTAALLRFTLGAIDHNFWAVAAALSLGVAAAVLSVLGLGSLFGR
Mvan_0640|M.vanbaalenii_PYR-1 SGVAGVTIAALLRYVLGSVDGNFWGIAAGLTLGVAAALLFMFGLGSLFGR
MSMEG_0720|M.smegmatis_MC2_155 SAVAGVTIAALLRYVFGSIDENFWGVSAGLMLGIAAAGLVVLGLGSLFGR
TH_2357|M.thermoresistible__bu AALAAWTIALLLRFVFGSITDNFWGVTAGLTLGILAAGLTVLGLGSVFGR
:.:*. * * ***:.:*:: ***.::*.* **: ** * ::****:***
Mflv_0254|M.gilvum_PYR-GCK AGLGAGAALALLVGNPLSGLASAPEMLPAGWGQFGQLLPQGATATLLRSA
Mvan_0640|M.vanbaalenii_PYR-1 AGLAVGSLLALLVGNPLSGLASAPEMLPAGWGQLGQLLPQGATATLLRST
MSMEG_0720|M.smegmatis_MC2_155 VGLGIGALLAVLVGNPLSGLTAAPEMLPG--GTLGQLLPQGANATLLRST
TH_2357|M.thermoresistible__bu AGLAIGALLAILLGNPLSGLNAAPELLPRGWGQLGQLLPQGANATLLRST
.**. *: **:*:******* :***:** * :********.******:
Mflv_0254|M.gilvum_PYR-GCK AAFGGAGATTAITVLTCWIVFGTALVAAAAVRARAVPAQ------
Mvan_0640|M.vanbaalenii_PYR-1 AAFEGAGAATAIVVLTCWTLAGTALTVTAAVRHRKQAPA------
MSMEG_0720|M.smegmatis_MC2_155 AYFGGAGAVTAIVVLCCWAALGTVMVVIAALRQARSNRA------
TH_2357|M.thermoresistible__bu AYFDGAGATTAIWVLVCWVLVGTALIAVAALRQRRTAEPHPAEMH
* * ****.*** ** ** **.: . **:*