For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLALGGSAVALIAVIVVARSIHGSGHA AVLGAIAVDRATLFLQGTVLLVTIMAVVFMAERSARVSPQRQNTLAVARLPGLDSFTPQASAVPGSDAER QAERAGATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSLPLYLMCGLARNRRLLSQEAAMKYFLL GAFSSAFFLYGVALLYGATGTLTLPGIRDALAARTDDSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQG APTPITGFMAAATKVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKRMLAYSSV AHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVRGADGSAGSEDADLSHWAGLGQRSPIVG VMLSMFLLAFAGIPLTSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTEESGDTPH VAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR
 
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation | 
| M. bovis AF2122 / 97 | Mb3182 | nuoN | - | 100% (531) | NADH dehydrogenase subunit N | 
| M. bovis AF2122 / 97 | Mb0089 | hycQ | 3e-30 | 25.28% (530) | hydrogenase HycQ | 
| M. bovis AF2122 / 97 | Mb3181 | nuoM | 5e-30 | 25.41% (429) | NADH dehydrogenase subunit M | 
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation | 
| M. gilvum PYR-GCK | Mflv_4494 | - | 0.0 | 65.59% (526) | NADH dehydrogenase subunit N | 
| M. tuberculosis H37Rv | Rv3158 | nuoN | 0.0 | 100.00% (531) | NADH dehydrogenase subunit N | 
| M. leprae Br4923 | - | - | - | - | - | 
| M. abscessus ATCC 19977 | MAB_2147 | - | 1e-171 | 58.18% (538) | NADH dehydrogenase subunit N | 
| M. marinum M | MMAR_1470 | nuoN | 0.0 | 83.02% (530) | NADH dehydrogenase I (chain N) NuoN (NADH- ubiquinone | 
| M. avium 104 | MAV_4047 | - | 0.0 | 82.83% (530) | NADH dehydrogenase subunit N | 
| M. smegmatis MC2 155 | MSMEG_2050 | nuoN | 0.0 | 66.03% (527) | NADH dehydrogenase subunit N | 
| M. thermoresistible (build 8) | TH_1092 | nuoN | 0.0 | 66.29% (528) | PROBABLE NADH DEHYDROGENASE I (CHAIN N) NUON | 
| M. ulcerans Agy99 | MUL_2472 | nuoN | 0.0 | 82.64% (530) | NADH dehydrogenase subunit N | 
| M. vanbaalenii PYR-1 | Mvan_1872 | - | 0.0 | 65.23% (532) | NADH dehydrogenase subunit N | 
CLUSTAL 2.0.9 multiple sequence alignment
Mb3182|M.bovis_AF2122/97            ----MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLA
Rv3158|M.tuberculosis_H37Rv         ----MILPAPHVEYFLLAPMLIVFSVAVAGVLAEAFLPRRWRYGAQVTLA
MMAR_1470|M.marinum_M               ----MILPSPSIEYFLLCPMLIVFGIAVIGVLAEAFLPRRLRYGAQVTLA
MUL_2472|M.ulcerans_Agy99           ----MILPSPSIEYFLLCPMLIVFGIAVVGVLAEAFLPRRLRYGAQVTLA
MAV_4047|M.avium_104                ---MMTLPTPSIQYFLLCPTLIVFGVAVAGVLAEAFLPRRIRYTAQVTLA
Mflv_4494|M.gilvum_PYR-GCK          MNTLTPLPTPTVEYFFLSPMLIVLGAAVLGVLVEALLPRHLRYRAQAGLS
Mvan_1872|M.vanbaalenii_PYR-1       MN----IPTPTVEYGLISPMLIVLAAAVLGVLVEAFVPRGRRYAVQVTLS
MSMEG_2050|M.smegmatis_MC2_155      ------MITPSIEYGLLSPMLIVFGVAIAGVLIEALAPRQSRYPLQVTLA
TH_1092|M.thermoresistible__bu      -----------VEYSLLLPMLIVFGVAIAGVLIEAFLPRRLRYRVQLTLT
MAB_2147|M.abscessus_ATCC_1997      MTDIGILPAPAIAYGALSPMLIMFGVAVVSVLVEAFVPRGHRLRTQLALA
                                               : *  : * **::. *: .** **: **  *   *  *:
Mb3182|M.bovis_AF2122/97            LGGSAVALIAVIVVARSIHGSG-HAAVLGAIAVDRATLFLQGTVLLVTIM
Rv3158|M.tuberculosis_H37Rv         LGGSAVALIAVIVVARSIHGSG-HAAVLGAIAVDRATLFLQGTVLLVTIM
MMAR_1470|M.marinum_M               LSGLVAAFVAVIVVARSIPVTG-RRAVLGSMAVDRPTLFLQGTVLLVAVM
MUL_2472|M.ulcerans_Agy99           LSGLVAAFVAVIVVARSIPVTG-RRAVLGSMAVDRPTLFLQGTVLLVEVM
MAV_4047|M.avium_104                LGGLVAALFAVIEVAESLPASG-RAAVLGAMAIDRPTLYLQGTVLLVAVM
Mflv_4494|M.gilvum_PYR-GCK          LAALLAAFVAVVMVARDLPADGAVSAVMGAVAVDMPALFLQGTILAVGVL
Mvan_1872|M.vanbaalenii_PYR-1       IAALVASFVAVVLVARDLHGGSGSEAVMGAIAVDMPALFLQGTILVVGVL
MSMEG_2050|M.smegmatis_MC2_155      LGGLIATVVAVVFVARGLSGTPGRPAVLGAVVLDAPAVFLQGTIALVGIL
TH_1092|M.thermoresistible__bu      LGGLVAALLAVLGLTDRLSGGGGDTAMMGAVVIDGPALFLQGTVVLLAIL
MAB_2147|M.abscessus_ATCC_1997      TVGILGAFVAVVALSGSH-----QVVMNGAVAIDGPTLYLQGLILVASGL
                                      .   :..**: ::          .: *::.:* .:::*** :     :
Mb3182|M.bovis_AF2122/97            AVVFMAERSARVSPQRQNTLAVARLPGLDSFTPQASAVPGSDAERQAERA
Rv3158|M.tuberculosis_H37Rv         AVVFMAERSARVSPQRQNTLAVARLPGLDSFTPQASAVPGSDAERQAERA
MMAR_1470|M.marinum_M               AVIFIAERSAHRVAAQTKTAVAAGSGGLDSFTPQASAVPGSDAEREAQRA
MUL_2472|M.ulcerans_Agy99           AVIFIAERSAHRVAAQTKTAVAAGSGGLDSFTPQASAVPGSDAEREAQRA
MAV_4047|M.avium_104                AVIFIAER--TQTKSDSKVAVVAGSGGLDSFTPQASAVPDSDAEREAERA
Mflv_4494|M.gilvum_PYR-GCK          GVLLIGER------QIGVVEDSENGRGLDAFTPQASAVAGSVAEKVAARA
Mvan_1872|M.vanbaalenii_PYR-1       GILLIGER------QISAPGPDTEGRGLEAFTPQASAVPGSVAEKLATRA
MSMEG_2050|M.smegmatis_MC2_155      GIMLIAER------QKATVSAG-EARGLEDFTPQASAVAGSVAEQLATKT
TH_1092|M.thermoresistible__bu      GVLLIAER------QIGS---RDPARGLDGFTPQASAVPGSVAEQVATRA
MAB_2147|M.abscessus_ATCC_1997      ALVVMAQR--RTVAAVPSAVGAGAGGGLDSFAAQASSVPGSEPERVLNRT
                                    .::.:.:*                  **: *:.***:*..* .*:   ::
Mb3182|M.bovis_AF2122/97            GATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSLPLYLMCGLARN
Rv3158|M.tuberculosis_H37Rv         GATQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSLPLYLMCGLARN
MMAR_1470|M.marinum_M               GAAQTEIFPLLTLSVGGMMVFPAANDLLTMFVALEVLSLPLYLMCGLARH
MUL_2472|M.ulcerans_Agy99           GVAQTEIFPLLTLSVGGMMVFPAANDLLTMFVALEVLSLPLYLMCGLARH
MAV_4047|M.avium_104                GAAQTELFPLAMLSVGGMMVFPASNDLLTMFVALEVLSLPLYLMCGLARH
Mflv_4494|M.gilvum_PYR-GCK          GNIQTEVFPLTMFAVAGMLLFPAADDLLTMFIALEVLSLPLYLLCGMARR
Mvan_1872|M.vanbaalenii_PYR-1       GVIQTEVFPLTLFAIGGMLLFPAANDLLTMFIALEVLSLPLYLLCGLARR
MSMEG_2050|M.smegmatis_MC2_155      GVMQTEVFPLTMFAIGGMLLFPAADDLLTMFVALEVLSLPLYLLCGLARR
TH_1092|M.thermoresistible__bu      GAVQTEVFPLTMFATGGMMLFGASDDLLTIFVALEVLSLPLYLLCGLARR
MAB_2147|M.abscessus_ATCC_1997      GITQTEIFPLTLFAIAGMMLFPACNDLLTMFVALEVFSLPLYVMCALARR
                                    *  ***:***  :: .**::* *.:****:*:****:*****::*.:**.
Mb3182|M.bovis_AF2122/97            RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALAART
Rv3158|M.tuberculosis_H37Rv         RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLTLPGIRDALAART
MMAR_1470|M.marinum_M               RRLLSQESALKYFLLGAFSSAFFLYGVALLYGATGSLTLTGIRDSLTARS
MUL_2472|M.ulcerans_Agy99           RRLLSQESALKYFLLGAFSSAVFLYGVALLYGATDSLTLTGIRDSLAARS
MAV_4047|M.avium_104                RRLLSQEAAMKYFLLGAFSSAFFLYGVALLYGATGTLLLTGIRDALITRG
Mflv_4494|M.gilvum_PYR-GCK          RRLLSQESAVKYFLLGAFSSAFFLYGAAMLYGYAGTLSFPGIADAVADGT
Mvan_1872|M.vanbaalenii_PYR-1       RRLLSQEASLKYFLLGAFSSAIFLYGAAMLYGYAGTLQLDGIADAVAAGT
MSMEG_2050|M.smegmatis_MC2_155      RRLLSQEAALKYFLLGAFSSAFFIYGAAMLYGSAGTLDLSGIAESVAAGS
TH_1092|M.thermoresistible__bu      QRLLSQEAALKYFLLGAFSSAFFVYGVAMLYGYSGTLRLGGIADAVATPP
MAB_2147|M.abscessus_ATCC_1997      RRLLSQESALKYFLLGAFSSAFFLFGSAFVYGYAGTVELDAVARAVDADA
                                    :******:::***********.*::* *::** :.:: : .:  ::    
Mb3182|M.bovis_AF2122/97            D--DSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAAT
Rv3158|M.tuberculosis_H37Rv         D--DSMALAGVALLAVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAAT
MMAR_1470|M.marinum_M               D--MSMALVGVGLLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAAT
MUL_2472|M.ulcerans_Agy99           D--MSMALVGVGLLSVGLLFKVGAVPFHSWIPDVYQGAPTPTTGFMAAAT
MAV_4047|M.avium_104                D--TSLALVGVALLSVGLLFKVGAVPFHSWIPDVYQGAPTPITGFMAAAT
Mflv_4494|M.gilvum_PYR-GCK          G-TTSLGLIGVALLLVGILFKIGAVPFHSWIPDVYQGAPTPITAFMAAAT
Mvan_1872|M.vanbaalenii_PYR-1       G-RTSLALIGIALLLVGVLFKVGAVPFHSWIPDVYQGAPTPITAFMAAAT
MSMEG_2050|M.smegmatis_MC2_155      G-NTSLALLGVALLLVGVLFKVGAVPFHSWIPDVYQGAPTSITAFMAAAT
TH_1092|M.thermoresistible__bu      GGSTALALIGIGLLMVGLLFKVGAVPFHSWIPDAYQGAPTAITAFMSAAT
MAB_2147|M.abscessus_ATCC_1997      G-ERSFLLLGVAMLSVGLLFKVGAVPFHFWVPDVYQGAPTPVTAFMAATT
                                    .   :: * *:.:* **:***:****** *:**.******. *.**:*:*
Mb3182|M.bovis_AF2122/97            KVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKR
Rv3158|M.tuberculosis_H37Rv         KVAAFGALLRVVYVALPPLHDQWRPVLWAIAILTMTVGTVTAVNQTNVKR
MMAR_1470|M.marinum_M               KVAAFGALLRVVYVALPPLHDQWRPVLWAISILTMAVGTITAVNQTNVKR
MUL_2472|M.ulcerans_Agy99           KVAAFGALLRVVYVALPPLHDQWRPVLWAISILTMAVGTITAVNQTNVKR
MAV_4047|M.avium_104                KVAAFGALLRVVYVALPPLHDQWRPVLWTISILTMAVGTITAVNQSDVKR
Mflv_4494|M.gilvum_PYR-GCK          KIAAFGAMLRLFYVALPGLRDDWRPVLWAIAILTMVVGTVTAVTQTDVKR
Mvan_1872|M.vanbaalenii_PYR-1       KIAAFGAMLRLFYVALPGLRDDWRPVLWAIAILTMVVGTVTAVTQNDVKR
MSMEG_2050|M.smegmatis_MC2_155      KIAAFGAMLRIFYVAVPALRDDWRPVLWAIAILTMVVGTVTAVTQTDVKR
TH_1092|M.thermoresistible__bu      KVAAFGALLRICHVALPALKDDWRPMLWAVAILTMVVGTVTAVTQTDVKR
MAB_2147|M.abscessus_ATCC_1997      KIAAFGALLRVLYVALPGITTDWRPVLWGVAIATMLIGSIGAVTQTDVKR
                                    *:*****:**: :**:* :  :***:** ::* ** :*:: **.*.:***
Mb3182|M.bovis_AF2122/97            MLAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVR
Rv3158|M.tuberculosis_H37Rv         MLAYSSVAHVGFILTGVIADNPAGLSATLFYLVAYSFSTMGAFAIVGLVR
MMAR_1470|M.marinum_M               MLAYSSVAHVGFILTGVIADNSAGLSATLFYLVAYSFSTVGAFAIVGLVR
MUL_2472|M.ulcerans_Agy99           MLAYSSVAHVGFILTGVIADNSAGLSATLFYLVAYSFSTVGAFAIVGLVR
MAV_4047|M.avium_104                MLAYSSVAHVGFILTGVIADNHTGLSATLFYLLAYSFSTVGAFAIVGLIR
Mflv_4494|M.gilvum_PYR-GCK          MLGYSAVAHTGFILTGVIAGNDAGVSSTLFYLFAYGFSTVGAFAVVGLVR
Mvan_1872|M.vanbaalenii_PYR-1       MLGYSAVAHSGFILTGVIAGSAAGLSSTLFYLFAYGFSTVGAFAVVSLVR
MSMEG_2050|M.smegmatis_MC2_155      MLAYSAVAHSGFILTGVIAANPAGVSSTLFYLFAYGFSTLGAFAVVGLIR
TH_1092|M.thermoresistible__bu      MLAYSAVAHTGFILTGVIAANEAGVSSTLFYLFAYGFSSLGAFALVGLVR
MAB_2147|M.abscessus_ATCC_1997      MLAYSAVAHTGFLLTGVAAANERGVSSTLFYLAAYGFSTVGAFIIAGLVR
                                    **.**:*** **:**** * .  *:*:***** **.**::*** :..*:*
Mb3182|M.bovis_AF2122/97            G------ADGSA--GSEDADLSHWAGLGQRSPIVGVMLSMFLLAFAGIPL
Rv3158|M.tuberculosis_H37Rv         G------ADGSA--GSEDADLSHWAGLGQRSPIVGVMLSMFLLAFAGIPL
MMAR_1470|M.marinum_M               D------ANG-----VEDANLSHWAGLGQRSPIVGVMLSMFLLAFAGIPL
MUL_2472|M.ulcerans_Agy99           D------ADG-----VEDANLSHWAGLGQRSPIVGVMLSMFLLAFAGIPL
MAV_4047|M.avium_104                D------ADG-----VEDATLSHWAGLGQRSPIVGVMFSMFLLAFAGIPL
Mflv_4494|M.gilvum_PYR-GCK          N------SDG-----EEDTAMARWAGLGKRYPLVGIVFSLFLLAFAGIPL
Mvan_1872|M.vanbaalenii_PYR-1       D------ADG-----EEDSAMARWAGLGKRYPVVGIVFSLFLLAFAGIPL
MSMEG_2050|M.smegmatis_MC2_155      N------AAG-----DEETSMAQWAGLGRRYPIVGVVFSLFLLAFAGIPL
TH_1092|M.thermoresistible__bu      S------RDG-----EEATSMAAWAGLGRRHPLAGVVFSLFLLAFAGIPL
MAB_2147|M.abscessus_ATCC_1997      SGNADDGADGDYKDDDEVTDLRRWAGVGRRAPVLGIVFALFLLAFAGIPL
                                    .        *      * : :  ***:*:* *: *:::::**********
Mb3182|M.bovis_AF2122/97            TSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTEES
Rv3158|M.tuberculosis_H37Rv         TSGFVSKFAVFRAAASAGAVPLVIVGVISSGVAAYFYVRVIVSMFFTEES
MMAR_1470|M.marinum_M               TSGFISKFSVFKAAAEGGAAPLVVIGVISSGVAAYFYVRVIVLMFFTEES
MUL_2472|M.ulcerans_Agy99           TSGFISKFSVFKAAAEGGAAPLVVIGVISSGVAAYFYVRVIVLMFFTEES
MAV_4047|M.avium_104                TSGFVSKLAVFKAAAQGGAVPLVIVGVVASGVAAYFYVRVIVSMFFTEAT
Mflv_4494|M.gilvum_PYR-GCK          TSGFVGKFAVFKAAGEGGAIPLVVVGVVASAIAAYFYVRVIVLMFFTDSP
Mvan_1872|M.vanbaalenii_PYR-1       TSGFVSKFAVFKAAGEGGAIPLVVVGVIASAIAAYFYVRVIMLMFFTDRP
MSMEG_2050|M.smegmatis_MC2_155      TSGFVSKFAVFKAAGEGGAIPLVIIGVIASAVAAYFYVRVIVLMFFTEPP
TH_1092|M.thermoresistible__bu      TSGFVAKFAVFKAAGEGGAIPLVVIGVIASAVAAYFYVRVIVLMFFTDPP
MAB_2147|M.abscessus_ATCC_1997      TSGFVSKFAVFEAAAAGGAMPLVVVGVMCSAIAAYFYVRVIVVMFFADPV
                                    ****:.*::**.**. .** ***::**:.*.:*********: ***::  
Mb3182|M.bovis_AF2122/97            GDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR
Rv3158|M.tuberculosis_H37Rv         GDTPHVAAPGVLSKAAIAVCTVVTVVLGIAPQPVLDLADQAAQLLR
MMAR_1470|M.marinum_M               SDTPQVVAPGILSKAAIAVCAAVTVLLGILPQPVLDLANQAAHLLH
MUL_2472|M.ulcerans_Agy99           SDTPQVVAPGILSKAAIAVCAAVTVLLGILPQPVLDLANQAAHLLH
MAV_4047|M.avium_104                EDTPHVVAPGILSKAAIAVCAAVTVALGVFPQPLLDLADQAAQLLH
Mflv_4494|M.gilvum_PYR-GCK          DDAPAVVVPSVLTTAVVTVTAAVTFMLGALPQPLLDLADSADRFF-
Mvan_1872|M.vanbaalenii_PYR-1       DDAPTVVVPSALTTAVVTVTAAVTFALGALPQPLLDLANAADRFL-
MSMEG_2050|M.smegmatis_MC2_155      DDAPELVVPSGLSTAVVTVTAAVTFALGALPQPLLDLANSAETFLH
TH_1092|M.thermoresistible__bu      SDAPEVVAPSGLTTAVVTVTAAVTFALGALPQPLLDLADSAVPFLR
MAB_2147|M.abscessus_ATCC_1997      EDSGVLRIPGPAVTVSIAVSALITVLLGVAPQPLLDLVENLADFVT
                                     *:  :  *.   .. ::* : :*. **  ***:***.:    :.