For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VKRVDTIRPRSRAVRLHVRGLGLPDETAIQLWIVDGRISTEPVAGADTVFDGGWILPGLVDAHCHVGLGK HGNVELDEAIAQAETERDVGALLLRDCGSPTDTRGLDDHEDLPRIIRAGRHLARPKRYIAGFAVELEDES QLPAAVAEQARRGDGWVKLVGDWIDRQIGDLAPLWSDDVLKAAIDTAHAQGARVTAHVFSEDALPGLINA GIDCIEHGTGLTDDTIALMLEHGTALVPTLINLENFPGIADAAGRYPTYAAHMRDLYARGYGRVAAAREA GVPVYAGTDAGSTIEHGRIADEVAALQRIGMTAHEALGAACWDARRWLGRPGLDDRASADLLCYAQDPRQ GPGVLQHPDLVILRGRTFGP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2939c | - | - | 100% (370) | hypothetical protein Mb2939c |
M. bovis AF2122 / 97 | Mb0076 | - | 2e-15 | 27.40% (365) | hypothetical protein Mb0076 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4181 | - | 1e-151 | 73.73% (354) | amidohydrolase |
M. tuberculosis H37Rv | Rv2915c | - | 0.0 | 100.00% (370) | hypothetical protein Rv2915c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3236c | - | 1e-153 | 73.09% (353) | amidohydrolase |
M. marinum M | MMAR_1793 | - | 1e-178 | 82.91% (357) | hypothetical protein MMAR_1793 |
M. avium 104 | MAV_3769 | - | 1e-169 | 79.11% (359) | amidohydrolase 3 |
M. smegmatis MC2 155 | MSMEG_2431 | - | 1e-160 | 76.75% (357) | amidohydrolase 3 |
M. thermoresistible (build 8) | TH_2394 | - | 1e-161 | 76.47% (357) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_2041 | - | 1e-177 | 82.63% (357) | hypothetical protein MUL_2041 |
M. vanbaalenii PYR-1 | Mvan_2182 | - | 1e-156 | 75.07% (353) | amidohydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4181|M.gilvum_PYR-GCK ----------MDGTPLHVRGRRLPDGEPVEWWIVGGRLSADPVAGAETVF Mvan_2182|M.vanbaalenii_PYR-1 --------MTADRTPLHIRGRSLPDGEPDEWWIVHGRLSAEPVAGAETVF MSMEG_2431|M.smegmatis_MC2_155 ------------MSALHVRGRGLPDGEPVEWWIADGVLSAEPIAGADTVF TH_2394|M.thermoresistible__bu ------------VKALHLRGRGLPHEQPVEWWIVDGRLSAEPVAGAETIF MAB_3236c|M.abscessus_ATCC_199 -------------MRAHLRGRTLPSEEPIDLWVHDGVISIEPIADADTVF Mb2939c|M.bovis_AF2122/97 MKRVDTIRPRSRAVRLHVRGLGLPDETAIQLWIVDGRISTEPVAGADTVF Rv2915c|M.tuberculosis_H37Rv MKRVDTIRPRSRAVRLHVRGLGLPDETAIQLWIVDGRISTEPVAGADTVF MMAR_1793|M.marinum_M -------------MRLHVRGRGLPDETAVELWIVDGHISTEPVSGADTVF MUL_2041|M.ulcerans_Agy99 -------------MRLHVRGRGLPDETAVELWIVDGHISAEPVSGADTVF MAV_3769|M.avium_104 -------------MRWHLRGRSLPDEGPIELWVVDGRISTQPVAGADTVF *:** ** . : *: * :* :*::.*:*:* Mflv_4181|M.gilvum_PYR-GCK GADGDGGWVLPGLVDAHCHVGLGPGGPTGLDEAIGQAETEREVGALLLRD Mvan_2182|M.vanbaalenii_PYR-1 ----DGGWILPGLVDAHCHVGLGPHGAIGMDEAVAQAETERGVGALLLRD MSMEG_2431|M.smegmatis_MC2_155 GAGGELGWIIPGLVDAHCHVGLGPGGAVGIDEAVAQAETERDAGALLLRD TH_2394|M.thermoresistible__bu GRHGYDGWILPGLVDAHCHVGIGPGGAVEFDEAIAQAETERDVGALLLRD MAB_3236c|M.abscessus_ATCC_199 ----DGGWLLPGLVDAHCHVGIGPQGPTSLEEAVAQAEAEREVGALLLRD Mb2939c|M.bovis_AF2122/97 ----DGGWILPGLVDAHCHVGLGKHGNVELDEAIAQAETERDVGALLLRD Rv2915c|M.tuberculosis_H37Rv ----DGGWILPGLVDAHCHVGLGKHGNVELDEAIAQAETERDVGALLLRD MMAR_1793|M.marinum_M ----DGGWILPGLVDAHCHVGLGHQGAIELDQAIAQAEAERDAGALLLRD MUL_2041|M.ulcerans_Agy99 ----DGGWILPGLVDAHCHVGLGHQGAIELDQAIAQAEAERDAGALLLRD MAV_3769|M.avium_104 GA-SGGGWIVPGLVDAHCHVGLGEHGEIPLDEAIAQAEIERDVGALLLRD **::***********:* * :::*:.*** ** .******* Mflv_4181|M.gilvum_PYR-GCK AGSPVDTRSLDDRADLPRIIRAGRHLAKPKRYIPGLPIDIEDESQLPEYV Mvan_2182|M.vanbaalenii_PYR-1 AGSPTDTRSFDDRPELPRIIRAGRHLARPRRYSRGFAVELEDEWQLPDAI MSMEG_2431|M.smegmatis_MC2_155 AGSPLDTRSLDDREDLPRIIRAGRHLARPKRYLPGVPIDIEDESQLPAVV TH_2394|M.thermoresistible__bu CGSPVDTRSLDERDDLPRIIRAGRHLARPKRYLPGLPIDIEDESQLPEYV MAB_3236c|M.abscessus_ATCC_199 AGSPVDTRGFDEREDLPRIIRAGRHLAKPKRYIPGLPLDIEDDAQLPEAV Mb2939c|M.bovis_AF2122/97 CGSPTDTRGLDDHEDLPRIIRAGRHLARPKRYIAGFAVELEDESQLPAAV Rv2915c|M.tuberculosis_H37Rv CGSPTDTRGLDDHEDLPRIIRAGRHLARPKRYIAGFAVELEDESQLPAAV MMAR_1793|M.marinum_M CGAPTDTRPLDDREDLPRIIRAGRHLARPKRYIPGFAAELEDESELPAAV MUL_2041|M.ulcerans_Agy99 CGAPTDTRPLDDREDLPRIIRAGRHLARPKRYIPGFAPELEDESELPAAV MAV_3769|M.avium_104 CGSPTDTRSLDDRDDLPRIIRAGKHLARPKRYAAGFSRELDDEWQLPDAV .*:* *** :*:: :********:***:*:** *.. :::*: :** : Mflv_4181|M.gilvum_PYR-GCK VQQARFGDGWVKLVGDWIDRGIGDLAPLWSDEVLEAAIAAAHANGARVTA Mvan_2182|M.vanbaalenii_PYR-1 AQQARWGDGWVKLVGDWIDRDTGDLAPLWSDDVLEAAIDAAHANGARVTA MSMEG_2431|M.smegmatis_MC2_155 AEQARWGDGWVKLIGDWIDRGAGDLAPLWSDDVLRAAIDAAHAEGARVTA TH_2394|M.thermoresistible__bu AQQARWGDGWVKLVGDWIDRSIGDLAPLWSDEVLKEAVDAAHAHGARVTA MAB_3236c|M.abscessus_ATCC_199 ALQARWGDGWVKLVGDWIDRAVGDLAPLWSDKILKQAIDAAHANGARVTA Mb2939c|M.bovis_AF2122/97 AEQARRGDGWVKLVGDWIDRQIGDLAPLWSDDVLKAAIDTAHAQGARVTA Rv2915c|M.tuberculosis_H37Rv AEQARRGDGWVKLVGDWIDRQIGDLAPLWSDDVLKAAIDTAHAQGARVTA MMAR_1793|M.marinum_M AAQARRGDGWIKLVGDWIDRQIGDLAPLWSDEVLKAAIDAAHANGARVTA MUL_2041|M.ulcerans_Agy99 AAQARRGDGWIKLVGDWIDRQIGDLAPLWSDEVLKAAIDAAHANGARVTA MAV_3769|M.avium_104 AQEAKRGDGWIKLVGDWIDRSVGDLAPLWSDEVLKAAIDTAHAHGARVTA . :*: ****:**:****** *********.:*. *: :***.****** Mflv_4181|M.gilvum_PYR-GCK HVFGEDALPGLIKAGIDCIEHGTGLTEDSIGLMVEYGTALVPTLIN-IEN Mvan_2182|M.vanbaalenii_PYR-1 HVFSEDALPGLIKAGIDCIEHGTGLTEDTIDLMVQHGTALVPTLIN-IEN MSMEG_2431|M.smegmatis_MC2_155 HVFGEDALPGLIGAGIDCIEHGTGLTDDTIASMVEHGTALVPTLIN-VET TH_2394|M.thermoresistible__bu HVFGEDALPGLIKAGIDCIEHGTGLTDDTIELMVEHGTALVPTLIN-VEN MAB_3236c|M.abscessus_ATCC_199 HVFGEDALPGLIHAGIDCIEHGTGLTDDTIALMVEHGTALVPTVIN-IEN Mb2939c|M.bovis_AF2122/97 HVFSEDALPGLINAGIDCIEHGTGLTDDTIALMLEHGTALVPTLIN-LEN Rv2915c|M.tuberculosis_H37Rv HVFSEDALPGLINAGIDCIEHGTGLTDDTIALMLEHGTALVPTLIN-LEN MMAR_1793|M.marinum_M HVFGEDALPGLINAGIDCIEHGTGLTDDTISLMRDHGTALVPTLIN-VEN MUL_2041|M.ulcerans_Agy99 HVFGEDALPGLINAGIDCIEHGTGLTDDTISLMRDHGTALVPTLIN-VEN MAV_3769|M.avium_104 HVFSEDALPGLINAGIDCIEHGTGLTDDTIELMVSRGTALVPTLVNVVEN ***.******** *************:*:* * . *******::* :*. Mflv_4181|M.gilvum_PYR-GCK FPGIAEAAGKYPTYARHMRDLYASCRDRVAAARDAGIPIFAGTDAGGMIA Mvan_2182|M.vanbaalenii_PYR-1 FPDIAASADKYPAYQRHMRALYETCSARVGAAREAGVPIFAGSDAGSAVA MSMEG_2431|M.smegmatis_MC2_155 FPGIADAAGKYPTYARHMRDLYASCYERVAAAHDAGVPIFAGTDAGGTIG TH_2394|M.thermoresistible__bu FPSIADRAVRYPTYAAHMRDLHERSYAQVSAAREAGVPVYAGTDAGGMIA MAB_3236c|M.abscessus_ATCC_199 FPGIADKAGKYPKYAQHMRDLYAGLHTTFGNAYDAGIPIYAGTDAGGSIA Mb2939c|M.bovis_AF2122/97 FPGIADAAGRYPTYAAHMRDLYARGYGRVAAAREAGVPVYAGTDAGSTIE Rv2915c|M.tuberculosis_H37Rv FPGIADAAGRYPTYAAHMRDLYARGYGRVAAAREAGVPVYAGTDAGSTIE MMAR_1793|M.marinum_M FPGIADSAVRYPTYAAHMRDLYASTYPRVAAAREAGIAIYAGTDAGGTIQ MUL_2041|M.ulcerans_Agy99 FPGIADSAVRYPTYAAHMRDLYASTYPRVAAAREAGIAIYAGTDAGGTIQ MAV_3769|M.avium_104 FPGIAQAAAKYPTYAAHMRDLYARGPSRIAAAREAGVPIYAGSDAGTMVA **.** * :** * *** *: .. * :**:.::**:*** : Mflv_4181|M.gilvum_PYR-GCK HGRIADEVEALKGIGMTPTEALGAACWDAREWLRRPTLRHGASADLVCFT Mvan_2182|M.vanbaalenii_PYR-1 HGRIAEEVDALKGIGMTPTEALGAACWDARAWLRRPGLAHGASADLVCFA MSMEG_2431|M.smegmatis_MC2_155 HGRISDEVEALKRIGMTPTHALGAACWDARAWLGRPGLEHGASADLLCFD TH_2394|M.thermoresistible__bu HGRIADEVEALKRIGMSSTEALGAASWNARSWLGRPGLEHGAPADLICYD MAB_3236c|M.abscessus_ATCC_199 HGRISDEVAALTRIGMSPTDALGAASWRARSWLGRPGLEHGAPADLLGYR Mb2939c|M.bovis_AF2122/97 HGRIADEVAALQRIGMTAHEALGAACWDARRWLGRPGLDDRASADLLCYA Rv2915c|M.tuberculosis_H37Rv HGRIADEVAALQRIGMTAHEALGAACWDARRWLGRPGLDDRASADLLCYA MMAR_1793|M.marinum_M HGRIADEVEALKKIGMSATEALGAACWEARRWLGRPTVEHGASADLVCFS MUL_2041|M.ulcerans_Agy99 HGRIADEVEALKKIGMSATEALGAACWEARRWLGRPTVEHGASADLVCFS MAV_3769|M.avium_104 PGRIADEVEALKGIGMTATQALGAACWDARRWLGRPGLEHGASADLLCFA ***::** ** ***:. .*****.* ** ** ** : . *.***: : Mflv_4181|M.gilvum_PYR-GCK EDPLTGAEVLANPTRVILRGVVY-------- Mvan_2182|M.vanbaalenii_PYR-1 DDPRTGAGVLAHPTLVMLRGAAY-------- MSMEG_2431|M.smegmatis_MC2_155 EDPRVAG--ADHPDLVILRGRIF-------- TH_2394|M.thermoresistible__bu EDPRLGPEVLTRPSRVILRGRVFQRPRR--- MAB_3236c|M.abscessus_ATCC_199 ADPRTGPGVLASPDLVMLRGQIR-------- Mb2939c|M.bovis_AF2122/97 QDPRQGPGVLQHPDLVILRGRTFGP------ Rv2915c|M.tuberculosis_H37Rv QDPRQGPGVLQHPDLVILRGRTFGP------ MMAR_1793|M.marinum_M EDPRRGAAILNRPDLVILRGRTYRPNQLGHR MUL_2041|M.ulcerans_Agy99 EDPRRGAAILNRPDLVILRGRTYRPNQLGHR MAV_3769|M.avium_104 EDPRSGPAVLRNPDLIMLRGNIFRSPA---- ** . * ::***