For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRA LAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGV GPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIP GHENVTLPHEMAHAVKVEKV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2730 | ideR | - | 100% (230) | IRON-dependent repressor and activator IDER |
M. bovis AF2122 / 97 | Mb2811 | sirR | 1e-16 | 30.65% (186) | transcriptional repressor SIRR |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3949 | - | 1e-111 | 87.83% (230) | iron dependent repressor |
M. tuberculosis H37Rv | Rv2711 | ideR | 1e-130 | 100.00% (230) | IRON-dependent repressor and activator IDER |
M. leprae Br4923 | MLBr_01013 | - | 1e-118 | 90.00% (230) | iron dependent repressor |
M. abscessus ATCC 19977 | MAB_3029 | - | 1e-105 | 81.74% (230) | Iron-dependent repressor IdeR |
M. marinum M | MMAR_2002 | ideR | 1e-121 | 92.61% (230) | iron-dependent repressor and activator IdeR |
M. avium 104 | MAV_3604 | - | 1e-121 | 93.48% (230) | iron-dependent repressor IdeR |
M. smegmatis MC2 155 | MSMEG_2750 | - | 1e-111 | 86.52% (230) | iron-dependent repressor IdeR |
M. thermoresistible (build 8) | TH_1487 | ideR | 1e-110 | 86.15% (231) | IRON-DEPENDENT REPRESSOR AND ACTIVATOR IDER |
M. ulcerans Agy99 | MUL_3351 | ideR | 1e-121 | 92.17% (230) | iron-dependent repressor and activator IdeR |
M. vanbaalenii PYR-1 | Mvan_2450 | - | 1e-111 | 88.26% (230) | iron dependent repressor |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3949|M.gilvum_PYR-GCK MNDLVDTTEMYLRTIYDLEEECVIPLRARIAERLDQSGPTVSQTVSRMER Mvan_2450|M.vanbaalenii_PYR-1 MNDLVDTTEMYLRTIYDLEEEGVIPLRARIAERLDQSGPTVSQTVSRMER MSMEG_2750|M.smegmatis_MC2_155 MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMER TH_1487|M.thermoresistible__bu MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVSRMER Mb2730|M.bovis_AF2122/97 MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMER Rv2711|M.tuberculosis_H37Rv MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMER MMAR_2002|M.marinum_M MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMER MUL_3351|M.ulcerans_Agy99 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMER MAV_3604|M.avium_104 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMER MLBr_01013|M.leprae_Br4923 MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMER MAB_3029|M.abscessus_ATCC_1997 MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMER **:****************** * **********:**********:**** Mflv_3949|M.gilvum_PYR-GCK DGLLHVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE Mvan_2450|M.vanbaalenii_PYR-1 DGLLHVAGDRHLELTEKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE MSMEG_2750|M.smegmatis_MC2_155 DGLLHVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEDVHAE TH_1487|M.thermoresistible__bu DGLLQVAGDRHLELTEKGRALAISVMRKHRLAERLLVDVIGLPWEEVHAE Mb2730|M.bovis_AF2122/97 DGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAE Rv2711|M.tuberculosis_H37Rv DGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAE MMAR_2002|M.marinum_M DGLLRVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE MUL_3351|M.ulcerans_Agy99 DGLLRVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE MAV_3604|M.avium_104 DGLLHVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE MLBr_01013|M.leprae_Br4923 DGLLRVAGNRHLELTTKGRAMAIAVMRKHRLAERLLVDVIGLPWEEVHAE MAB_3029|M.abscessus_ATCC_1997 DGLLNVAGDRHLELTDKGRALAVSVMRKHRLAECLLVDIIGLPWEDVHAE ****.***:****** ****:*::********* ****:******:**** Mflv_3949|M.gilvum_PYR-GCK ACRWEHVMSVDVERRLVQVLNNPTTSPFGNPIPGLSELGVGDESG-EAMS Mvan_2450|M.vanbaalenii_PYR-1 ACRWEHVMSVDVERRLVQVLNNPTTSPFGNPIPGLSELGVGDEIN-ETFS MSMEG_2750|M.smegmatis_MC2_155 ACRWEHVMSEEVERRLVQVLDNPTTSPFGNPIPGLTELGVTPGVNTEDVS TH_1487|M.thermoresistible__bu ACRWEHVMSEDVERRLVKVLDNPTTSPFGNPIPGLSELGVVSTEP-EDMN Mb2730|M.bovis_AF2122/97 ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDAN Rv2711|M.tuberculosis_H37Rv ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDAN MMAR_2002|M.marinum_M ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLLDLGVGPESDSYEAN MUL_3351|M.ulcerans_Agy99 ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLLDLGVGPESDSYEAN MAV_3604|M.avium_104 ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLLDLGVGPESGAEEAN MLBr_01013|M.leprae_Br4923 ACRWEHVMSEDVERRLIKVLNNPTTSPFGNPIPGLLDLGAGPDASAANAK MAB_3029|M.abscessus_ATCC_1997 ACRWEHVMSEDVERRLLTVLNNPTTSPFGNPIPGLSELGVPADRS-ESAS ********* :*****: **:************** :**. . Mflv_3949|M.gilvum_PYR-GCK LVRLTELPAGMPVAVVVRQLTEHVQGDVELIARLKDAGVVPNARVTVENN Mvan_2450|M.vanbaalenii_PYR-1 MVRLTELPAGMPVAVVVRQLTEHVQGDAELIARLKDAGVVPNARVTVEVK MSMEG_2750|M.smegmatis_MC2_155 LVRLTELPVGMPVAVVVRQLTEHVQGDTDLIGRLKEAGVVPNARVTVEAN TH_1487|M.thermoresistible__bu LVRLTELPAGTPVPVVVRQLTEHVQGDVELITRLKEAGVVPNARVTVQVN Mb2730|M.bovis_AF2122/97 LVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETT Rv2711|M.tuberculosis_H37Rv LVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETT MMAR_2002|M.marinum_M LVRLTELPSGSPVAVVVRQLTEHVQGDIDLISRLKDAGVVPNARVTVETS MUL_3351|M.ulcerans_Agy99 LVRLTELPSGSPVAVVVRQLTEHVQGDIDLISRLKDAGVVPNARVTVETS MAV_3604|M.avium_104 LVRLTELPSGAPVAVVVRQLTEHVQGDIDLISRLKDAGVVPNARVTVETG MLBr_01013|M.leprae_Br4923 LVRLTELPSGSPVAVVVRQLTEHVQDDIDLITRLKDTGVVPNARVTVETS MAB_3029|M.abscessus_ATCC_1997 AVRLTEIPSGSQVAVVVRRLAEHVQADTDLLSRLKDAGVVPNARVTVESS *****:* * *.****:*:**** * :*: ***::**********: Mflv_3949|M.gilvum_PYR-GCK DHGGVMIVIPGHEQVELPHEMAHAVRVEKV Mvan_2450|M.vanbaalenii_PYR-1 DHGGVMIVIPGHEQVELPHEMAHAVKVEKV MSMEG_2750|M.smegmatis_MC2_155 NNGGVMIVIPGHEQVELPHHMAHAVKVEKV TH_1487|M.thermoresistible__bu ENKSVSIIIPGHEQVDLPYQMAHAVKVEKV Mb2730|M.bovis_AF2122/97 PGGGVTIVIPGHENVTLPHEMAHAVKVEKV Rv2711|M.tuberculosis_H37Rv PGGGVTIVIPGHENVTLPHEMAHAVKVEKV MMAR_2002|M.marinum_M PAGGVTILIPGHENVTLPHAMAHAVKVEKV MUL_3351|M.ulcerans_Agy99 PAGGVTILIPGHENVTLPHAMAYAVKVEKV MAV_3604|M.avium_104 PAG-VTIVIPGHENVTLPHEMAHAVKVEKV MLBr_01013|M.leprae_Br4923 PAGNVIIIIPGHENVTLPHEMAHAVKVEKV MAB_3029|M.abscessus_ATCC_1997 PDG-VIIIIPGHESVELPHEMAHAVMVEKV * *:*****.* **: **:** ****