For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_3029 (-)

annotation: Iron-dependent repressor IdeR
coordinates: 3081214 - 3081900
length: 228

VNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMERDGLLNVAGDRHLELTDKGRA
LAVSVMRKHRLAECLLVDIIGLPWEDVHAEACRWEHVMSEDVERRLLTVLNNPTTSPFGNPIPGLSELGV
PADRSESASAVRLTEIPSGSQVAVVVRRLAEHVQADTDLLSRLKDAGVVPNARVTVESSPDGVIIIIPGH
ESVELPHEMAHAVMVEKV
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_3029--100% (228)Iron-dependent repressor IdeR
M. abscessus ATCC 19977MAB_3110-7e-2031.00% (200) iron dependent transcriptional repressor FeoA

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2730ideR1e-10581.74% (230) IRON-dependent repressor and activator IDER
M. gilvum PYR-GCKMflv_3949-1e-10582.10% (229) iron dependent repressor
M. tuberculosis H37RvRv2711ideR1e-10581.74% (230) IRON-dependent repressor and activator IDER
M. leprae Br4923MLBr_01013-1e-10482.61% (230) iron dependent repressor
M. marinum MMMAR_2002ideR1e-10684.35% (230) iron-dependent repressor and activator IdeR
M. avium 104MAV_3604-1e-10783.84% (229) iron-dependent repressor IdeR
M. smegmatis MC2 155MSMEG_2750-1e-10582.61% (230) iron-dependent repressor IdeR
M. thermoresistible (build 8)TH_1487ideR1e-10279.91% (229) IRON-DEPENDENT REPRESSOR AND ACTIVATOR IDER
M. ulcerans Agy99MUL_3351ideR1e-10583.91% (230) iron-dependent repressor and activator IdeR
M. vanbaalenii PYR-1Mvan_2450-1e-10582.10% (229) iron dependent repressor

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_2002|M.marinum_M               MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMER
MUL_3351|M.ulcerans_Agy99           MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMER
MAV_3604|M.avium_104                MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMER
Mb2730|M.bovis_AF2122/97            MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMER
Rv2711|M.tuberculosis_H37Rv         MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMER
MLBr_01013|M.leprae_Br4923          MNDLVDTTEMYLRTIYDLEEEGVTPLRARIAERLEQSGPTVSQTVSRMER
Mflv_3949|M.gilvum_PYR-GCK          MNDLVDTTEMYLRTIYDLEEECVIPLRARIAERLDQSGPTVSQTVSRMER
Mvan_2450|M.vanbaalenii_PYR-1       MNDLVDTTEMYLRTIYDLEEEGVIPLRARIAERLDQSGPTVSQTVSRMER
MSMEG_2750|M.smegmatis_MC2_155      MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLDQSGPTVSQTVSRMER
TH_1487|M.thermoresistible__bu      MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVSRMER
MAB_3029|M.abscessus_ATCC_1997      MNDLVDTTEMYLRTIYDLEEEGVVPLRARIAERLEQSGPTVSQTVARMER
                                    **:****************** * **********:**********:****

MMAR_2002|M.marinum_M               DGLLRVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE
MUL_3351|M.ulcerans_Agy99           DGLLRVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE
MAV_3604|M.avium_104                DGLLHVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE
Mb2730|M.bovis_AF2122/97            DGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAE
Rv2711|M.tuberculosis_H37Rv         DGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAE
MLBr_01013|M.leprae_Br4923          DGLLRVAGNRHLELTTKGRAMAIAVMRKHRLAERLLVDVIGLPWEEVHAE
Mflv_3949|M.gilvum_PYR-GCK          DGLLHVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE
Mvan_2450|M.vanbaalenii_PYR-1       DGLLHVAGDRHLELTEKGRALAVAVMRKHRLAERLLVDVIGLPWEEVHAE
MSMEG_2750|M.smegmatis_MC2_155      DGLLHVAGDRHLELTDKGRALAVAVMRKHRLAERLLVDVIGLPWEDVHAE
TH_1487|M.thermoresistible__bu      DGLLQVAGDRHLELTEKGRALAISVMRKHRLAERLLVDVIGLPWEEVHAE
MAB_3029|M.abscessus_ATCC_1997      DGLLNVAGDRHLELTDKGRALAVSVMRKHRLAECLLVDIIGLPWEDVHAE
                                    ****.***:****** ****:*::********* ****:******:****

MMAR_2002|M.marinum_M               ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLLDLGVGPESDSYEAN
MUL_3351|M.ulcerans_Agy99           ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLLDLGVGPESDSYEAN
MAV_3604|M.avium_104                ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLLDLGVGPESGAEEAN
Mb2730|M.bovis_AF2122/97            ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDAN
Rv2711|M.tuberculosis_H37Rv         ACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDAN
MLBr_01013|M.leprae_Br4923          ACRWEHVMSEDVERRLIKVLNNPTTSPFGNPIPGLLDLGAGPDASAANAK
Mflv_3949|M.gilvum_PYR-GCK          ACRWEHVMSVDVERRLVQVLNNPTTSPFGNPIPGLSELGVGDESG-EAMS
Mvan_2450|M.vanbaalenii_PYR-1       ACRWEHVMSVDVERRLVQVLNNPTTSPFGNPIPGLSELGVGDEIN-ETFS
MSMEG_2750|M.smegmatis_MC2_155      ACRWEHVMSEEVERRLVQVLDNPTTSPFGNPIPGLTELGVTPGVNTEDVS
TH_1487|M.thermoresistible__bu      ACRWEHVMSEDVERRLVKVLDNPTTSPFGNPIPGLSELGVVSTEP-EDMN
MAB_3029|M.abscessus_ATCC_1997      ACRWEHVMSEDVERRLLTVLNNPTTSPFGNPIPGLSELGVPADRS-ESAS
                                    ********* :*****: **:************** :**.         .

MMAR_2002|M.marinum_M               LVRLTELPSGSPVAVVVRQLTEHVQGDIDLISRLKDAGVVPNARVTVETS
MUL_3351|M.ulcerans_Agy99           LVRLTELPSGSPVAVVVRQLTEHVQGDIDLISRLKDAGVVPNARVTVETS
MAV_3604|M.avium_104                LVRLTELPSGAPVAVVVRQLTEHVQGDIDLISRLKDAGVVPNARVTVETG
Mb2730|M.bovis_AF2122/97            LVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETT
Rv2711|M.tuberculosis_H37Rv         LVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETT
MLBr_01013|M.leprae_Br4923          LVRLTELPSGSPVAVVVRQLTEHVQDDIDLITRLKDTGVVPNARVTVETS
Mflv_3949|M.gilvum_PYR-GCK          LVRLTELPAGMPVAVVVRQLTEHVQGDVELIARLKDAGVVPNARVTVENN
Mvan_2450|M.vanbaalenii_PYR-1       MVRLTELPAGMPVAVVVRQLTEHVQGDAELIARLKDAGVVPNARVTVEVK
MSMEG_2750|M.smegmatis_MC2_155      LVRLTELPVGMPVAVVVRQLTEHVQGDTDLIGRLKEAGVVPNARVTVEAN
TH_1487|M.thermoresistible__bu      LVRLTELPAGTPVPVVVRQLTEHVQGDVELITRLKEAGVVPNARVTVQVN
MAB_3029|M.abscessus_ATCC_1997      AVRLTEIPSGSQVAVVVRRLAEHVQADTDLLSRLKDAGVVPNARVTVESS
                                     *****:* *  *.****:*:**** * :*: ***::**********:  

MMAR_2002|M.marinum_M               PAGGVTILIPGHENVTLPHAMAHAVKVEKV
MUL_3351|M.ulcerans_Agy99           PAGGVTILIPGHENVTLPHAMAYAVKVEKV
MAV_3604|M.avium_104                PAG-VTIVIPGHENVTLPHEMAHAVKVEKV
Mb2730|M.bovis_AF2122/97            PGGGVTIVIPGHENVTLPHEMAHAVKVEKV
Rv2711|M.tuberculosis_H37Rv         PGGGVTIVIPGHENVTLPHEMAHAVKVEKV
MLBr_01013|M.leprae_Br4923          PAGNVIIIIPGHENVTLPHEMAHAVKVEKV
Mflv_3949|M.gilvum_PYR-GCK          DHGGVMIVIPGHEQVELPHEMAHAVRVEKV
Mvan_2450|M.vanbaalenii_PYR-1       DHGGVMIVIPGHEQVELPHEMAHAVKVEKV
MSMEG_2750|M.smegmatis_MC2_155      NNGGVMIVIPGHEQVELPHHMAHAVKVEKV
TH_1487|M.thermoresistible__bu      ENKSVSIIIPGHEQVDLPYQMAHAVKVEKV
MAB_3029|M.abscessus_ATCC_1997      PDG-VIIIIPGHESVELPHEMAHAVMVEKV
                                        * *:*****.* **: **:** ****