For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTQIAFVAYPGVTALDVVGPYEVLRNLPHAQVRFVWLRGRRATSHWLTLPALKAFGAIPVADERIVHQDN IVTSAGVSAGLDLALWLAGQLGGEARAKAIQLAIEYDPQPPFDSGHMSKASPTTKAAATALLSKDSAKPA NLTAATLLAWERALAAVQSRRRKRQPVGAQARRP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1965c | - | - | 100% (174) | hypothetical protein Mb1965c |
| M. bovis AF2122 / 97 | Mb0053 | - | 2e-15 | 43.01% (93) | hypothetical protein Mb0053 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_5266 | - | 2e-40 | 58.21% (134) | ThiJ/PfpI domain-containing protein |
| M. tuberculosis H37Rv | Rv1930c | - | 2e-96 | 100.00% (174) | hypothetical protein Rv1930c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0943 | - | 4e-43 | 62.50% (136) | hypothetical protein MAB_0943 |
| M. marinum M | MMAR_2854 | - | 8e-60 | 83.21% (131) | hypothetical protein MMAR_2854 |
| M. avium 104 | MAV_2773 | - | 9e-54 | 76.92% (130) | DJ-1/PfpI family protein |
| M. smegmatis MC2 155 | MSMEG_1107 | - | 1e-41 | 63.08% (130) | isonitrile hydratase, putative |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0070 | - | 2e-14 | 41.75% (103) | transcriptional regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_0973 | - | 1e-43 | 62.60% (131) | ThiJ/PfpI domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1965c|M.bovis_AF2122/97 ----MTQIAFVAYPGVTALDVVGPYEVLRNLPHAQVRFVW----------
Rv1930c|M.tuberculosis_H37Rv ----MTQIAFVAYPGVTALDVVGPYEVLRNLPHAQVRFVW----------
MMAR_2854|M.marinum_M ----MPQFAFVAYPGFTALDMIGPYEVLRNLPHAEVRFVWHDPGPITADS
MAV_2773|M.avium_104 ----MTQIAFLAYPGFTALDMIGPYEVLRNLPGAEVRFVWHETGPITADS
MAB_0943|M.abscessus_ATCC_1997 MTSAATQIAIVLYPDFTALDFIGPYEVLRFIPDTEVRFVWHEPGPVTADS
Mflv_5266|M.gilvum_PYR-GCK -----MQVAIMLYPGFTALDFIGPYESLRWLPDTEVRFVWHEPGPIAADS
Mvan_0973|M.vanbaalenii_PYR-1 -----MQVAIMLYPGFTALDFIGPYESLRWLPDVEVRFVWHEPGPIAADS
MSMEG_1107|M.smegmatis_MC2_155 -----MQIAVVLYPTFTALDFIGPYEVLRNLPDAEVRFVWHEPGPVTADS
MUL_0070|M.ulcerans_Agy99 -----MQVAIPVFPRFTALDAVGPYEVLQRIPSIDVVFIGHQRGEVRTEN
*.*. :* .**** :**** *: :* :* *:
Mb1965c|M.bovis_AF2122/97 --------------------------------------------------
Rv1930c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2854|M.marinum_M GVLVLGATHSLAETPAPDVVVVPGGPATPVHARDEKLLDWLRQAHRSASW
MAV_2773|M.avium_104 GVLVIGATHSLAETPSPDVVLVPGGPGTAVHARDDALLDWLRTAHRTATW
MAB_0943|M.abscessus_ATCC_1997 GVLVIGATHSFGETPAPDVVLVPGGPGTTMAARDDKLLDWLRRVHPAAAW
Mflv_5266|M.gilvum_PYR-GCK HVLLVGATHSFDETPSPDVILIPGGFATMEHARDEVVLAWVRRAHETSTW
Mvan_0973|M.vanbaalenii_PYR-1 HVLLVGATHSFDETPSPDLILIPGGFATMEHARDEKVLDWVRRAHRTSTW
MSMEG_1107|M.smegmatis_MC2_155 GVLMVGATHTFDETPSPDVVLVPGGPGSSAAARDERVLAWLRAVHPTANW
MUL_0070|M.ulcerans_Agy99 GMLGVTCDATFDEVDAPDVVAFPGGIGTRGLLEDETIRGWLQAVHPHTRF
Mb1965c|M.bovis_AF2122/97 ----------------LRGRRATSHWLTLPALKAFGAIPVADERIVHQ--
Rv1930c|M.tuberculosis_H37Rv ----------------LRGRRATSHWLTLPALKAFGAIPVADERIVHQ--
MMAR_2854|M.marinum_M TTSVCSGSVILAAAGLLKDRRATSHWLTIPALKAFGAIPVADKRIVQQ--
MAV_2773|M.avium_104 TTSVCTGSLILAAAGLLDGRRATSHWLTIPALKAFGVTAVPDERIVHE--
MAB_0943|M.abscessus_ATCC_1997 TTSVCSGSLVLAAAGLLEGQRATSHWSTLPLLKPFGVTPVGDERIVRTGH
Mflv_5266|M.gilvum_PYR-GCK TTSVCSGSVILAAAGVLDGKRATSHWAALPVLKTLGAQPVGDQRIVEAD-
Mvan_0973|M.vanbaalenii_PYR-1 TTSVCSGSVILAASGVLDGKRATSHWAALPVLKTFGVQPVGDERVVVAD-
MSMEG_1107|M.smegmatis_MC2_155 VASVCSGSMVLAAAGLLDGKRATSHWGALSALKMCGVTAVSDERIVRAD-
MUL_0070|M.ulcerans_Agy99 TTSVCTGALLLAAAGLLDGLTATTHWRAAELLNGLGARYVP-QRVVEHLP
* . **:** : *: *. * :*:*
Mb1965c|M.bovis_AF2122/97 DNIVTSAGVSAGLDLALWLAGQLGGEARAKAIQLAIEYDPQPPFDSGHMS
Rv1930c|M.tuberculosis_H37Rv DNIVTSAGVSAGLDLALWLAGQLGGEARAKAIQLAIEYDPQPPFDSGHMS
MMAR_2854|M.marinum_M DNIITSAGVSAGLDLGLWLAGQIGGESRAKAIQLALEYDPQPPFDSGHMS
MAV_2773|M.avium_104 DGIVTSAGVSAGLDLALWLAAQIGGDGRAKAIQLALEYDPQPPFDSGHLS
MAB_0943|M.abscessus_ATCC_1997 AGLVTAAGVSAGIDLGLWLAGQIAGEERAKAIQLSIEYDPQPPFDSGHMS
Mflv_5266|M.gilvum_PYR-GCK AKTVTAAGVSAGIDLGLWLAGRIAGEEKAKAIQLSMEYDPQPPFDSGHMS
Mvan_0973|M.vanbaalenii_PYR-1 DKTVTAAGVSAGIDLGLWLAGQIAGESKAKAIQLSMEYDPQPPFDSGHMS
MSMEG_1107|M.smegmatis_MC2_155 DKVITAAGVSAGIDLGMWLAGQIAGEAKAKAIQLLIEYDPQPPFDAGHMS
MUL_0070|M.ulcerans_Agy99 QRIITAAGVSSGIDMGLRLVELLVDREAAQVTQLLIEYDPEPPFDAGSLA
:*:****:*:*:.: *. : . *:. ** :****:****:* ::
Mb1965c|M.bovis_AF2122/97 KASPTTKAAATALLSKDSAKPANLTAATLLAWERALAAVQSRRRKRQPVG
Rv1930c|M.tuberculosis_H37Rv KASPTTKAAATALLSKDSAKPANLTAATLLAWERALAAVQSRRRKRQPVG
MMAR_2854|M.marinum_M KASASTKVAATALLSKDSATPVNLKAATMLAWQQALAAARARRRKRQPVD
MAV_2773|M.avium_104 KASASTKAAATALLSRDSLSPTYLKATALLAWDQALDRVRSRRRRRQPDL
MAB_0943|M.abscessus_ATCC_1997 KASAATKATATAGLAKDTFKPSVMAAGAKLLWDGALATARRRGDRRRSFG
Mflv_5266|M.gilvum_PYR-GCK KASAGTKALATAMMGREMVRPAALAASTGLLWDAALKRIRRAKRRQ--GS
Mvan_0973|M.vanbaalenii_PYR-1 KASASTKALATAMMGREMAKPAALAASTGLLWDAALKRIRARRSRPEPAK
MSMEG_1107|M.smegmatis_MC2_155 KASATTKAGATALLGRDMIKPEPLKASVLLAWDQAIRRVRGR------GA
MUL_0070|M.ulcerans_Agy99 KADEGVRARAIEFLDSRK--------------------------------
**. .:. * :
Mb1965c|M.bovis_AF2122/97 AQAR---RP
Rv1930c|M.tuberculosis_H37Rv AQAR---RP
MMAR_2854|M.marinum_M STP------
MAV_2773|M.avium_104 SPA------
MAB_0943|M.abscessus_ATCC_1997 SRLDPRARP
Mflv_5266|M.gilvum_PYR-GCK LSAP-----
Mvan_0973|M.vanbaalenii_PYR-1 LRGGS----
MSMEG_1107|M.smegmatis_MC2_155 ARRTA----
MUL_0070|M.ulcerans_Agy99 ---------