For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. bovis AF2122 / 97 Mb1688 (pks10)

annotation: chalcone synthase
coordinates: 1859546 - 1860607
length: 353

VSVIAGVFGALPPYRYSQRELTDSFVSIPDFEGYEDIVRQLHASAKVNSRHLVLPLEKYPKLTDFGEANK
IFIEKAVDLGVQALAGALDESGLRPEDLDVLITATVTGLAVPSLDARIAGRLGLRADVRRVPLFGLGCVA
GAAGVARLHDYLRGAPDGVAALVSVELCSLTYPGYKPTLPGLVGSALFADGAAAVVAAGVKRAQDIGADG
PDILDSRSHLYPDSLRTMGYDVGSAGFELVLSRDLAAVVEQYLGNDVTTFLASHGLSTTDVGAWVTHPGG
PKIINAITETLDLSPQALELTWRSLGEIGNLSSASVLHVLRDTIAKPPPSGSPGLMIAMGPGFCSELVLL
RWH
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1688pks10-100% (353)chalcone synthase
M. bovis AF2122 / 97Mb1693pks11e-15374.15% (352) chalcone synthase
M. bovis AF2122 / 97Mb1406-7e-3026.89% (357) hypothetical protein Mb1406

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_5140-1e-13867.42% (353) chalcone/stilbene synthase domain-containing protein
M. tuberculosis H37RvRv1660pks100.0100.00% (353) chalcone synthase
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum MMMAR_2470pks101e-17886.12% (353) chalcone synthase, Pks10
M. avium 104MAV_3110-1e-16882.15% (353) Pks10 protein
M. smegmatis MC2 155MSMEG_0808-1e-13867.91% (349) chalcone synthase Pks10
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_1656pks111e-15172.24% (353) chalcone synthase, Pks11
M. vanbaalenii PYR-1Mvan_1196-1e-14166.76% (352) chalcone/stilbene synthase domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_5140|M.gilvum_PYR-GCK          ---MTDVHTPVSVIAGVQGALPPHRYSQAEVTDAFLAAPAFAEVGDLLRS
Mvan_1196|M.vanbaalenii_PYR-1       ------MNDRISVIAGVQGALPPYRYSQAEITERFVAVPAFAELEDVVRG
Mb1688|M.bovis_AF2122/97            ----------MSVIAGVFGALPPYRYSQRELTDSFVSIPDFEGYEDIVRQ
Rv1660|M.tuberculosis_H37Rv         ----------MSVIAGVFGALPPYRYSQRELTDSFVSIPDFEGYEDIVRQ
MMAR_2470|M.marinum_M               ----------MSVIAGVFGALPPHRYSQRELTETFVNIPDFEGYEELVRQ
MAV_3110|M.avium_104                ----------MSVIAGVFGALPPHRYPQRELTDFFVSIPEFEGYEDIVRQ
MUL_1656|M.ulcerans_Agy99           ----------MSVIAGVFGALPPHRYSQSEITESFLEFPGLQEHEEIVRR
MSMEG_0808|M.smegmatis_MC2_155      MENTAFTPSGTCTIAGVHGVLPPHRYTQAEVTEALLDLPGYADFEGIVRS
                                               ..**** *.***:**.* *:*: ::  *       ::* 

Mflv_5140|M.gilvum_PYR-GCK          LHTNAKVDARHLVLPLEQYPDLLDFGDANDLYIHHAVELGCQALTAALDE
Mvan_1196|M.vanbaalenii_PYR-1       LHKHAKVDARHFVLPMDRYPTLVDFGETNDLYLEHSLDLACEALTAALDE
Mb1688|M.bovis_AF2122/97            LHASAKVNSRHLVLPLEKYPKLTDFGEANKIFIEKAVDLGVQALAGALDE
Rv1660|M.tuberculosis_H37Rv         LHASAKVNSRHLVLPLEKYPKLTDFGEANKIFIEKAVDLGVQALAGALDE
MMAR_2470|M.marinum_M               LHANAKVNSRHLVLPLETYPKLNDFGEANGIFIDKAVDLGVEALMGALDE
MAV_3110|M.avium_104                LHASAKVGSRHLVLPLEQYPTLTDFGVANRIFIDHAVTLGCAALSGALDE
MUL_1656|M.ulcerans_Agy99           MHAAAKVNSRQFVLPIEQYPALTDFGDTNEIFIEKAVDLGIEALMGALDE
MSMEG_0808|M.smegmatis_MC2_155      LHKSAKVNSRYLTLPLEEYAALDDFGETNGLFIEHATELGCAALTGALDE
                                    :*  ***.:* :.**:: *. * *** :* :::.::  *.  ** .****

Mflv_5140|M.gilvum_PYR-GCK          AGLAPSDLDVIMSTTVTGIAVPSLDARIAAKLGLRPDVRRVPLFGLGCVA
Mvan_1196|M.vanbaalenii_PYR-1       AGLGPRDLDMIMTTTVTGIAVPSLDARIADRLGLRPDVRRVPLFGLGCVA
Mb1688|M.bovis_AF2122/97            SGLRPEDLDVLITATVTGLAVPSLDARIAGRLGLRADVRRVPLFGLGCVA
Rv1660|M.tuberculosis_H37Rv         SGLRPEDLDVLITATVTGLAVPSLDARIAGRLGLRADVRRVPLFGLGCVA
MMAR_2470|M.marinum_M               AGLQPEDLDVLITTTVTGLAVPSLDARIAGRVGLRPDVRRVPLFGLGCVA
MAV_3110|M.avium_104                AGLKPEDLDVLITTTVTGLAVPSVDARIAARLGLRDDVRRVPLFGLGCVA
MUL_1656|M.ulcerans_Agy99           AGLTPQDIDLIITTTVTGVAVPSLDARIAGRLGLRPDVRRMPLFGLGCVA
MSMEG_0808|M.smegmatis_MC2_155      AGLRPEDVDLIITTTVTGAVVPSLDARIAGRVGLRPDVRRVPIFGLGCVA
                                    :** * *:*:::::**** .***:***** ::*** ****:*:*******

Mflv_5140|M.gilvum_PYR-GCK          GAAGIARMHDYLRGAPGHVAALISVELCSLTRPALAPTIGSLVGSALFGD
Mvan_1196|M.vanbaalenii_PYR-1       GAAGIARMHDYLRGAPDHIAALVSVELCSLTYPAVEPTMASLVGSALFGD
Mb1688|M.bovis_AF2122/97            GAAGVARLHDYLRGAPDGVAALVSVELCSLTYPGYKPTLPGLVGSALFAD
Rv1660|M.tuberculosis_H37Rv         GAAGVARLHDYLRGAPDGVAALVSVELCSLTYPGYKPTLPGLVGSALFAD
MMAR_2470|M.marinum_M               GAAGVARLHDYLRGAPNGIAALISVELCSLTFPGYKPSAAGLVGSALFAD
MAV_3110|M.avium_104                GAAGVARMHDYLRGAPDAVAALVSVELCSLTYPGYKPSLAGLVGSALFAD
MUL_1656|M.ulcerans_Agy99           GAAGVARLHDYLRGAPDGVAVLIAVELCSLTYPAVKPTVSGIVGTALFGD
MSMEG_0808|M.smegmatis_MC2_155      GAAGVARLNDYLRGAPDKVAVLVSVELCSLTH-KHTPSMPTLVAGALFGD
                                    ****:**::*******. :*.*::*******     *:   :*. ***.*

Mflv_5140|M.gilvum_PYR-GCK          GAAAVVAVGEERAGHIRASGPDVLDSRSRMYPDSLDIMGWSVNHNGFQLV
Mvan_1196|M.vanbaalenii_PYR-1       GAAAVIAVGAERAETIGATGPEVLDTRSRMYPDSLDTMGWRVGASGFQLI
Mb1688|M.bovis_AF2122/97            GAAAVVAAGVKRAQDIGADGPDILDSRSHLYPDSLRTMGYDVGSAGFELV
Rv1660|M.tuberculosis_H37Rv         GAAAVVAAGVKRAQDIGADGPDILDSRSHLYPDSLRTMGYDVGSAGFELV
MMAR_2470|M.marinum_M               GAAAVVAVGDGRAEEVGASGPDILDSCSHLYPDSLRTMGYDVGSAGFELV
MAV_3110|M.avium_104                GAGAVVAVGERRAEQLDAAGPSVLDSRSHLYPDSLRTMGYDVGATGFELV
MUL_1656|M.ulcerans_Agy99           GAAAVVAVGDRRAEQIRAGGPDILDSRSRLYPESLDIMGWDVGSHGLQLR
MSMEG_0808|M.smegmatis_MC2_155      GASAVVAVGAGRAEQLDPIGPDVLDSRSHLYPDSLHAMGWDIGTKGFEIV
                                    **.**:*.*  **  : . **.:**: *::**:**  **: :.  *::: 

Mflv_5140|M.gilvum_PYR-GCK          LSPELPALIERYLPDDMASFLGEHDLGIGDIATWVSHPGGPKVLEAIASA
Mvan_1196|M.vanbaalenii_PYR-1       LSPNLPELIERYLADDMAGFLGAHDLQIGDIAAWVSHPGGPKVMEAISET
Mb1688|M.bovis_AF2122/97            LSRDLAAVVEQYLGNDVTTFLASHGLSTTDVGAWVTHPGGPKIINAITET
Rv1660|M.tuberculosis_H37Rv         LSRDLAAVVEQYLGNDVTTFLASHGLSTTDVGAWVTHPGGPKIINAITET
MMAR_2470|M.marinum_M               LSKDIADVVEEYVAEDVTTFLAGHGLSVTDIGAWVTHPGGPKIINAITES
MAV_3110|M.avium_104                LSKDVAAVVEQYIEDDVTGFLGAHGLTTNDIGAFVSHPGGPKVIEAINAA
MUL_1656|M.ulcerans_Agy99           LAPELTNLIEEYLPDDVDAFLAMHDLTKNDIGAWVSHPGGPKVLDAIANS
MSMEG_0808|M.smegmatis_MC2_155      LSAEVPGFVGRYLGDDVTEFLGEHGVATDDVSAWVSHPGGPKVIEAIIET
                                    *: ::. .: .*: :*:  **. *.:   *:.::*:******:::**  :

Mflv_5140|M.gilvum_PYR-GCK          LDLPDDALELSWRSLAEIGNLSSSSVLHILRDTIAKKPPAATPGLLMAMG
Mvan_1196|M.vanbaalenii_PYR-1       LGLPDDALDLAWRSLAEVGNLSSSSVLHVLRDTRAKKPPAGTPGLLMAMG
Mb1688|M.bovis_AF2122/97            LDLSPQALELTWRSLGEIGNLSSASVLHVLRDTIAKPPPSGSPGLMIAMG
Rv1660|M.tuberculosis_H37Rv         LDLSPQALELTWRSLGEIGNLSSASVLHVLRDTIAKPPPSGSPGLMIAMG
MMAR_2470|M.marinum_M               LNLPPEALELTWRSLGEIGNLSSASVLHVLRDTIAKPPPSGSPGLMMAMG
MAV_3110|M.avium_104                LGLPPEALELTWRSLGEIGNLSSASVLHVLRDTLAKPPPSDSPGLMLAMG
MUL_1656|M.ulcerans_Agy99           LGLPSDALELTWRSLGEIGNLSSASVLRILRDTIAKVPPSGSPGLMLAMG
MSMEG_0808|M.smegmatis_MC2_155      LDLPSDALDLTWQSLAEVGNLSSSSVLHVLRDTIRKRPPAGTPGVLMAMG
                                    *.*. :**:*:*:**.*:*****:***::****  * **: :**:::***

Mflv_5140|M.gilvum_PYR-GCK          PGFCSELVLLRWH
Mvan_1196|M.vanbaalenii_PYR-1       PGFCSELVLLRWR
Mb1688|M.bovis_AF2122/97            PGFCSELVLLRWH
Rv1660|M.tuberculosis_H37Rv         PGFCSELVLLRWH
MMAR_2470|M.marinum_M               PGFCSELVLLRWH
MAV_3110|M.avium_104                PGFCSELVLLRWH
MUL_1656|M.ulcerans_Agy99           PGFCAELVLLRWH
MSMEG_0808|M.smegmatis_MC2_155      PGFCSELVLLRWR
                                    ****:*******: