For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TDRKIPGDRSYTADHEWIDIAPGAARPDGPVRVGITSVAVEALGDLVFVQLPEVGETVSAGESCGEVEST KTVSDLIAPASGEIVEVNTAAVDDPATIATDPYGAGWLYSVQPTAVGDLLTASEYAGQNGLSL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_4903 | gcvH_1 | - | 100% (134) | glycine cleavage system H protein GcvH_1 |
| M. ulcerans Agy99 | MUL_3045 | gcvH | 9e-29 | 57.41% (108) | glycine cleavage system protein H |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1857 | gcvH | 3e-28 | 50.00% (132) | glycine cleavage system protein H |
| M. gilvum PYR-GCK | Mflv_3403 | - | 4e-27 | 47.69% (130) | glycine cleavage system protein H |
| M. tuberculosis H37Rv | Rv1826 | gcvH | 5e-29 | 50.76% (132) | glycine cleavage system protein H |
| M. leprae Br4923 | MLBr_02077 | gcvH | 7e-29 | 55.08% (118) | glycine cleavage system protein H |
| M. abscessus ATCC 19977 | MAB_2402 | - | 5e-26 | 44.96% (129) | glycine cleavage system H protein (GcvH) |
| M. marinum M | MMAR_0209 | gcvH_1 | 4e-72 | 97.76% (134) | glycine cleavage system H protein GcvH_1 |
| M. avium 104 | MAV_2889 | gcvH | 6e-30 | 53.08% (130) | glycine cleavage system protein H |
| M. smegmatis MC2 155 | MSMEG_3648 | gcvH | 4e-26 | 46.88% (128) | glycine cleavage system protein H |
| M. thermoresistible (build 8) | TH_1125 | gcvH | 2e-28 | 50.39% (127) | PROBABLE GLYCINE CLEAVAGE SYSTEM H PROTEIN GCVH |
| M. vanbaalenii PYR-1 | Mvan_3136 | - | 2e-28 | 54.13% (109) | glycine cleavage system protein H |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3403|M.gilvum_PYR-GCK MSE--IPADLSYTEEHEWVQRTG-----DDTVRVGITDYAQAALGDVVFV
Mvan_3136|M.vanbaalenii_PYR-1 MSE--IPADLSYTTEHEWVQRTG-----DGTVRVGITDYAQSALGDVVFV
MAB_2402|M.abscessus_ATCC_1997 MTE--IPADLHYTEEHEWVRRTG-----DTTVRIGITDYAQSQLGDVVFV
MSMEG_3648|M.smegmatis_MC2_155 MSE--IPADLYYTSEHEWVLRTG-----DDTVRVGITDYAQSALGDVVFV
TH_1125|M.thermoresistible__bu VSD--IPSDLYYTSEHEWVRRTG-----DGTARVGITDYAQNALGDVVFV
Mb1857|M.bovis_AF2122/97 MSD--IPSDLHYTAEHEWIRRSG-----DDTVRVGITDYAQSALGDVVFV
Rv1826|M.tuberculosis_H37Rv MSD--IPSDLHYTAEHEWIRRSG-----DDTVRVGITDYAQSALGDVVFV
MLBr_02077|M.leprae_Br4923 MSD--IPSDLHYTAEHEWIRRSR-----EDTVRVGLTDFAQSTLGDVVFV
MAV_2889|M.avium_104 MSD--IPPDLHYTAEHEWVRRSG-----DDTVRVGITDFAQSALGDVVFV
MUL_4903|M.ulcerans_Agy99 MTDRKIPGDRSYTADHEWIDIAPGAARPDGPVRVGITSVAVEALGDLVFV
MMAR_0209|M.marinum_M MTDRKIPGDRSYTADHEWIDIAPGAATPDGPVRVGITSVAVEALGDLVFV
::: ** * ** :***: : : ..*:*:*. * ***:***
Mflv_3403|M.gilvum_PYR-GCK QLPDVDAALTAGESFGEVESTKSVSDLYAPLTAKVVAVNGDLESNPQLVN
Mvan_3136|M.vanbaalenii_PYR-1 QLPDVGSDVTAGESFGEVESTKSVSDLYAPVTAKVIAVNGDLEGNPQLVN
MAB_2402|M.abscessus_ATCC_1997 QLPDVGSELTAGSTFGEVESTKSVSDLFAPITAKVIAANGDLDSDPQLVN
MSMEG_3648|M.smegmatis_MC2_155 QLPDVGADVASGDAFGEVESTKSVSDLYAPVTAKVVAVNGDLEGSPELVN
TH_1125|M.thermoresistible__bu QLPDVGAEITAGESFGEVESTKSVSDLFAPVTAKVVAVNDNLEASPDLVN
Mb1857|M.bovis_AF2122/97 QLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSAVNSDLDGTPQLVN
Rv1826|M.tuberculosis_H37Rv QLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNSDLDGTPQLVN
MLBr_02077|M.leprae_Br4923 QLPEVGAELAAGKSFGEVESTKSVSDLYAPVSGTVSAVNTDLEGSPQLVN
MAV_2889|M.avium_104 QLPEVGAQLTAGESFGEVESTKSVSDLYAPVSGTVTAVNTDLEGSPQLVN
MUL_4903|M.ulcerans_Agy99 QLPEVGETVSAGESCGEVESTKTVSDLIAPASGEIVEVNTAAVDDPATIA
MMAR_0209|M.marinum_M QLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNTAAVDDPATIA
*** :. :::*.: *******:**** ** :. : .* * :
Mflv_3403|M.gilvum_PYR-GCK SDPYGEGWLVELQAD--SAS-LDAALAELFDAEGYRGHVAD--
Mvan_3136|M.vanbaalenii_PYR-1 SDPYGEGWLVELQTE--TES-MQAGLASLLDAEGYRAHVAD--
MAB_2402|M.abscessus_ATCC_1997 SDPYGEGWLVDLEAA--SAADLDAALNDLLDASGY-GDATD--
MSMEG_3648|M.smegmatis_MC2_155 SDPYGEGWLVDLRVE--AGT-LDEALGGLLDAEGYRAVVTE--
TH_1125|M.thermoresistible__bu SDPYGEGWLIDVQAD--PDE-LGAALQNLLTADGYRAVIDE--
Mb1857|M.bovis_AF2122/97 SDPYGAGWLLDIQVDSSDVAALESALTTLLDAEAYRGTLTE--
Rv1826|M.tuberculosis_H37Rv SDPYGAGWLLDIQVDSSDVAALESALTTLLDAEAYRGTLTE--
MLBr_02077|M.leprae_Br4923 SDPYGAGWLLDVHV--SDVGALESAIATLLDAETYRGTLTK--
MAV_2889|M.avium_104 SDPYGAGWLLDVQV--SDAAALESAITALLDAEAYRGTLTE--
MUL_4903|M.ulcerans_Agy99 TDPYGAGWLYSVQP---------TAVGDLLTASEYAGQNGLSL
MMAR_0209|M.marinum_M TDPYGAGWLYSVQP---------TAVGELLTASEYAGQNGLSL
:**** *** .:. .: *: *. * .