For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SEIPADLSYTEEHEWVQRTGDDTVRVGITDYAQAALGDVVFVQLPDVDAALTAGESFGEVESTKSVSDLY APLTAKVVAVNGDLESNPQLVNSDPYGEGWLVELQADSASLDAALAELFDAEGYRGHVAD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3403 | - | - | 100% (131) | glycine cleavage system protein H |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1857 | gcvH | 5e-51 | 69.40% (134) | glycine cleavage system protein H |
M. tuberculosis H37Rv | Rv1826 | gcvH | 2e-50 | 68.66% (134) | glycine cleavage system protein H |
M. leprae Br4923 | MLBr_02077 | gcvH | 7e-47 | 67.19% (128) | glycine cleavage system protein H |
M. abscessus ATCC 19977 | MAB_2402 | - | 9e-54 | 78.57% (126) | glycine cleavage system H protein (GcvH) |
M. marinum M | MMAR_2703 | gcvH | 1e-49 | 68.66% (134) | glycine cleavage system H protein GcvH |
M. avium 104 | MAV_2889 | gcvH | 6e-51 | 71.21% (132) | glycine cleavage system protein H |
M. smegmatis MC2 155 | MSMEG_3648 | gcvH | 3e-55 | 77.10% (131) | glycine cleavage system protein H |
M. thermoresistible (build 8) | TH_1125 | gcvH | 4e-52 | 76.19% (126) | PROBABLE GLYCINE CLEAVAGE SYSTEM H PROTEIN GCVH |
M. ulcerans Agy99 | MUL_3045 | gcvH | 2e-49 | 67.91% (134) | glycine cleavage system protein H |
M. vanbaalenii PYR-1 | Mvan_3136 | - | 4e-61 | 84.73% (131) | glycine cleavage system protein H |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3403|M.gilvum_PYR-GCK MSEIPADLSYTEEHEWVQRTGDDTVRVGITDYAQAALGDVVFVQLPDVDA Mvan_3136|M.vanbaalenii_PYR-1 MSEIPADLSYTTEHEWVQRTGDGTVRVGITDYAQSALGDVVFVQLPDVGS MAB_2402|M.abscessus_ATCC_1997 MTEIPADLHYTEEHEWVRRTGDTTVRIGITDYAQSQLGDVVFVQLPDVGS MSMEG_3648|M.smegmatis_MC2_155 MSEIPADLYYTSEHEWVLRTGDDTVRVGITDYAQSALGDVVFVQLPDVGA TH_1125|M.thermoresistible__bu VSDIPSDLYYTSEHEWVRRTGDGTARVGITDYAQNALGDVVFVQLPDVGA Mb1857|M.bovis_AF2122/97 MSDIPSDLHYTAEHEWIRRSGDDTVRVGITDYAQSALGDVVFVQLPVIGT Rv1826|M.tuberculosis_H37Rv MSDIPSDLHYTAEHEWIRRSGDDTVRVGITDYAQSALGDVVFVQLPVIGT MLBr_02077|M.leprae_Br4923 MSDIPSDLHYTAEHEWIRRSREDTVRVGLTDFAQSTLGDVVFVQLPEVGA MAV_2889|M.avium_104 MSDIPPDLHYTAEHEWVRRSGDDTVRVGITDFAQSALGDVVFVQLPEVGA MMAR_2703|M.marinum_M MSDIPADLHYTAEHEWIRRTAEDTVRVGITDFAQSALGDVVFVQLPDVGA MUL_3045|M.ulcerans_Agy99 MSDIPADLHYTAEHEWIRRTAEDTVRVGITDFAQSALGDVVFVQLPDVGA :::**.** ** ****: *: : *.*:*:**:** ********** :.: Mflv_3403|M.gilvum_PYR-GCK ALTAGESFGEVESTKSVSDLYAPLTAKVVAVNGDLESNPQLVNSDPYGEG Mvan_3136|M.vanbaalenii_PYR-1 DVTAGESFGEVESTKSVSDLYAPVTAKVIAVNGDLEGNPQLVNSDPYGEG MAB_2402|M.abscessus_ATCC_1997 ELTAGSTFGEVESTKSVSDLFAPITAKVIAANGDLDSDPQLVNSDPYGEG MSMEG_3648|M.smegmatis_MC2_155 DVASGDAFGEVESTKSVSDLYAPVTAKVVAVNGDLEGSPELVNSDPYGEG TH_1125|M.thermoresistible__bu EITAGESFGEVESTKSVSDLFAPVTAKVVAVNDNLEASPDLVNSDPYGEG Mb1857|M.bovis_AF2122/97 AVTAGETFGEVESTKSVSDLYAPISGKVSAVNSDLDGTPQLVNSDPYGAG Rv1826|M.tuberculosis_H37Rv AVTAGETFGEVESTKSVSDLYAPISGKVSEVNSDLDGTPQLVNSDPYGAG MLBr_02077|M.leprae_Br4923 ELAAGKSFGEVESTKSVSDLYAPVSGTVSAVNTDLEGSPQLVNSDPYGAG MAV_2889|M.avium_104 QLTAGESFGEVESTKSVSDLYAPVSGTVTAVNTDLEGSPQLVNSDPYGAG MMAR_2703|M.marinum_M EVTAGETFGEVESTKSVSDLFAPISGKVAAVNADLEATPQLVNTDPYGAG MUL_3045|M.ulcerans_Agy99 EVTAGETFGEVESTKSVSDLFAPISGKVAAVNADLEATPQLVNTDPYGAG :::*.:*************:**::..* .* :*:. *:***:**** * Mflv_3403|M.gilvum_PYR-GCK WLVELQAD--SAS-LDAALAELFDAEGYRGHVAD Mvan_3136|M.vanbaalenii_PYR-1 WLVELQTE--TES-MQAGLASLLDAEGYRAHVAD MAB_2402|M.abscessus_ATCC_1997 WLVDLEAA--SAADLDAALNDLLDASGY-GDATD MSMEG_3648|M.smegmatis_MC2_155 WLVDLRVE--AGT-LDEALGGLLDAEGYRAVVTE TH_1125|M.thermoresistible__bu WLIDVQAD--PDE-LGAALQNLLTADGYRAVIDE Mb1857|M.bovis_AF2122/97 WLLDIQVDSSDVAALESALTTLLDAEAYRGTLTE Rv1826|M.tuberculosis_H37Rv WLLDIQVDSSDVAALESALTTLLDAEAYRGTLTE MLBr_02077|M.leprae_Br4923 WLLDVHV--SDVGALESAIATLLDAETYRGTLTK MAV_2889|M.avium_104 WLLDVQV--SDAAALESAITALLDAEAYRGTLTE MMAR_2703|M.marinum_M WLLDVQVEGSDVAALESALAALLDAQTYRDTVTE MUL_3045|M.ulcerans_Agy99 WLLDVQVEGSDVAALESALAALLDVQTYRDTVTE **:::.. : .: *: .. * .