For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. ulcerans Agy99 MUL_4539 (pcaA)

annotation: mycolic acid synthase PcaA
coordinates: 5040579 - 5041442
length: 287

SVQLTPHFGNVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMTLEQAQIAKIDLALGKLNLEPGMTLLDI
GCGWGATMRRAIEKYDVNVVGLTLSENQAAHVQQMFDQIDTSRSRRVLLEGWEKFDEPVDRIVSIGAFEH
FGRLRYAHFFKMAYQALPADGIMLLHTIARPTFKEARAKGLTLTHEIVHFSQFILAEIFPGGWLPTIPTV
EEHATAAGFKVTRVQSLQLHYARTLEIWAAALEAKKEEAIAIQSQKVYDRYMKYLTGCAKLFRQGYTDID
QFTLEK*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. ulcerans Agy99MUL_4539pcaA-100% (287)mycolic acid synthase PcaA
M. ulcerans Agy99MUL_3772mmaA5e-12172.13% (287) methoxy mycolic acid synthase 5 MmaA5
M. ulcerans Agy99MUL_0730mmaA3e-10565.34% (277) methoxy mycolic acid synthase 3, MmaA3

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0479cpcaA1e-14886.41% (287) mycolic acid synthase pcaA (cyclopropane synthase)
M. gilvum PYR-GCKMflv_3304-1e-11869.58% (286) cyclopropane-fatty-acyl-phospholipid synthase
M. tuberculosis H37RvRv0470cpcaA1e-14886.41% (287) mycolic acid synthase pcaA (cyclopropane synthase)
M. leprae Br4923MLBr_02459umaA21e-14885.02% (287) Mycolic acid synthase
M. abscessus ATCC 19977MAB_3881-1e-10464.44% (284) cyclopropane-fatty-acyl-phospholipid synthase 1
M. marinum MMMAR_0796pcaA1e-167100.00% (287) mycolic acid synthase PcaA
M. avium 104MAV_4679-1e-14283.86% (285) cyclopropane-fatty-acyl-phospholipid synthase 1
M. smegmatis MC2 155MSMEG_3538-1e-11769.47% (285) cyclopropane-fatty-acyl-phospholipid synthase 1
M. thermoresistible (build 8)TH_3139-1e-12474.20% (283) PUTATIVE Cyclopropane-fatty-acyl-phospholipid synthase
M. vanbaalenii PYR-1Mvan_3025-1e-11971.33% (286) cyclopropane-fatty-acyl-phospholipid synthase

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3304|M.gilvum_PYR-GCK          MSDTPNGSADLQPHFDDVQSHYDLSDDFYRLFLDPTQTYSCAYFERDDMT
Mvan_3025|M.vanbaalenii_PYR-1       MPETTSGSADLQPHFEDVQSHYDLSDDFYRLFLDPTQTYSCAYFERDDMT
MSMEG_3538|M.smegmatis_MC2_155      --------MALQPHFEDVQSHYDLSDEFFRLFLDPTQTYSCAYFERDDMT
TH_3139|M.thermoresistible__bu      ----------LTPHFEEVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMT
MUL_4539|M.ulcerans_Agy99           ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMT
MMAR_0796|M.marinum_M               ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMT
Mb0479c|M.bovis_AF2122/97           ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMT
Rv0470c|M.tuberculosis_H37Rv        ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMT
MLBr_02459|M.leprae_Br4923          ------MSVQLTPHFRNVQAHYDLSDDFFRLFLDPTLTYSCAYFERDDMT
MAV_4679|M.avium_104                --------MQLTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMT
MAB_3881|M.abscessus_ATCC_1997      -------MSKLTPKFSDVQAHYDLSDDFFALFLDPSRTYSCAYFEPETLT
                                              * *:* :**:******:*: *****: ******** : :*

Mflv_3304|M.gilvum_PYR-GCK          LEEAQRAKIDLALGKLGLEPGMTLLDIGCGWGGTLLRALEKYDVNVIGLT
Mvan_3025|M.vanbaalenii_PYR-1       LEEAQIAKIDLSLGKLGLQPGMTLLDIGCGWGATLLRALDKYDVNVIGLT
MSMEG_3538|M.smegmatis_MC2_155      LEEAQLAKIDLSLGKLGLQPGMKLLDIGCGWGATLRRALSRYDVDVVGLT
TH_3139|M.thermoresistible__bu      LEEAQLAKIDLSLGKLDLKPGMTLLDIGCGWGATIKRAVEKYDVNVVGLT
MUL_4539|M.ulcerans_Agy99           LEQAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT
MMAR_0796|M.marinum_M               LEQAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT
Mb0479c|M.bovis_AF2122/97           LQEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT
Rv0470c|M.tuberculosis_H37Rv        LQEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT
MLBr_02459|M.leprae_Br4923          LEEAQLAKVDLALGKLKLEPGMTLLDIGCGWGATMKRAIEIYDVNVIGLT
MAV_4679|M.avium_104                LEEAQIAKIDLALGKLKLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT
MAB_3881|M.abscessus_ATCC_1997      LEQAQQAKIDLALGKLNLEPGMTLLDVGCGWGSTMKRALEHYDVNVIGLT
                                    *::** **:**:**** *:***.***:*****.*: **:. ***:*:***

Mflv_3304|M.gilvum_PYR-GCK          LSRNQQAHVQKVLDEHDSPRSKTVLLQGWEQFDQPVDRIVSIGAFEHFGS
Mvan_3025|M.vanbaalenii_PYR-1       LSRNQQAHVQKRLDAHGSGRSKRVLLAGWEQFDEPVDRIVSIGAFEHFGR
MSMEG_3538|M.smegmatis_MC2_155      LSKNQQAHVERSFAETDTERSRRVLLQGWEQFDEPVDRIVSIGAFEHFGA
TH_3139|M.thermoresistible__bu      LSRNQQAHVQQVLDEMDSTRSRRVLLQGWEQFREPVDRIVSIGAFEHFGR
MUL_4539|M.ulcerans_Agy99           LSENQAAHVQQMFDQIDTSRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGR
MMAR_0796|M.marinum_M               LSENQAAHVQQMFDQIDTSRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGR
Mb0479c|M.bovis_AF2122/97           LSENQAGHVQKMFDQMDTPRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGH
Rv0470c|M.tuberculosis_H37Rv        LSENQAGHVQKMFDQMDTPRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGH
MLBr_02459|M.leprae_Br4923          LSENQAAHVQKTFDELDTPRTRRVLLEGWEKFHEPVDRIVSIGAFEHFGR
MAV_4679|M.avium_104                LSENQAEHVQKTFDAMDTPRTRRVLLEGWEKFHEPVDRIVSIGAFEHFGR
MAB_3881|M.abscessus_ATCC_1997      LSKNQFAYVNTLLDSAGSSRNYEVRLAGWEEFEGTVDRIVSIGAFEHFGH
                                    **.**  :*:  :   .: *.  * * ***:*  .************** 

Mflv_3304|M.gilvum_PYR-GCK          DRYDEFFRRAYSVLPDDGVMLLHTIVKPSDEEFAERKLPLTMTKLKFFKF
Mvan_3025|M.vanbaalenii_PYR-1       DRYDEFFKKAYQVLPDGGVMMLHTIIKPTDEEFADRGLKLTMSIVRFSKF
MSMEG_3538|M.smegmatis_MC2_155      DRYDDFFRMAHTALPDDGVMLLHTIVKPSGDEMSQRGLPLTMRKLRFFKF
TH_3139|M.thermoresistible__bu      DRYEEFFKMAYEVLPADGIMMLHTIIKPSDEEFAARELPITMRYLRFFKF
MUL_4539|M.ulcerans_Agy99           LRYAHFFKMAYQALPADGIMLLHTIARPTFKEARAKGLTLTHEIVHFSQF
MMAR_0796|M.marinum_M               LRYAHFFKMAYQALPADGIMLLHTIARPTFKEARAKGLTLTHEIVHFSQF
Mb0479c|M.bovis_AF2122/97           QRYHHFFEVTHRTLPADGKMLLHTIVRPTFKEGREKGLTLTHELVHFTKF
Rv0470c|M.tuberculosis_H37Rv        QRYHHFFEVTHRTLPADGKMLLHTIVRPTFKEGREKGLTLTHELVHFTKF
MLBr_02459|M.leprae_Br4923          QRYARFFKMAHEVLPADSVMLLHTIVRPTFKDARARGMTLTHEIVHFTQF
MAV_4679|M.avium_104                QRYGRFFRMAYDVLPPGGIMLLHTIVRPSFKDARAKGMKLTHEIVEFSRF
MAB_3881|M.abscessus_ATCC_1997      ERYDSFFAMAHRVLPSDGKMLLHTIVSHHPDEWKRMGIPLLMSRVRFIYF
                                     **  **  :: .** .. *:****     .:     : :    :.*  *

Mflv_3304|M.gilvum_PYR-GCK          IMDEIFPGGMLPKVDDVEKHATKASFKVNRIQPLRLHYARTLQIWAASLE
Mvan_3025|M.vanbaalenii_PYR-1       IMDEIFPGGDLPKPTTVAEHATKAGFRLTREQRLREHYAKTLDIWADALR
MSMEG_3538|M.smegmatis_MC2_155      IMDEIFPGGELPYVAQVSEHAQRAGFRVDRVQSLRPHYAKTLDIWAETLR
TH_3139|M.thermoresistible__bu      IMDEIFPGGDLPQAKVVEEHATRAGFTVAHTQPLRLHYARTLDHWSSALE
MUL_4539|M.ulcerans_Agy99           ILAEIFPGGWLPTIPTVEEHATAAGFKVTRVQSLQLHYARTLEIWAAALE
MMAR_0796|M.marinum_M               ILAEIFPGGWLPTIPTVEEHATAAGFKVTRVQSLQLHYARTLEIWAAALE
Mb0479c|M.bovis_AF2122/97           ILAEIFPGGWLPSIPTVHEYAEKVGFRVTAVQSLQLHYARTLDMWATALE
Rv0470c|M.tuberculosis_H37Rv        ILAEIFPGGWLPSIPTVHEYAEKVGFRVTAVQSLQLHYARTLDMWATALE
MLBr_02459|M.leprae_Br4923          ILAEIFPGGWLPTVPTVEEHATAAGFKFTRIQSLQLHYAKTLDLWAARLE
MAV_4679|M.avium_104                ILAEIFPGGWLPTPQTVGEYGVTAGFDLTRVQSLQLHYARTLDLWAQALE
MAB_3881|M.abscessus_ATCC_1997      IGTEIFPGGRLPSVPMVDKHAALAGFHITRHHSLQPHYARTLDCWATNLA
                                    *  ****** **    * ::.  ..* .   : *: ***:**: *:  * 

Mflv_3304|M.gilvum_PYR-GCK          SRRDDAIAIQSEEVYDRYMKYLTGCAELFTEGYTDVCQFTLAK-------
Mvan_3025|M.vanbaalenii_PYR-1       KREDDAVAIQSREDYDRYMKYLTGCADLFRDGYTDICQFTLEK-------
MSMEG_3538|M.smegmatis_MC2_155      GRKDEAIAVQSEEMYERYMKYLTGCADLFREGYTDVCQFTLVKA------
TH_3139|M.thermoresistible__bu      ARKDEAIAIQSEEVYERYMKYLTGCADLFRKGYTDVCQFTLKK-------
MUL_4539|M.ulcerans_Agy99           AKKEEAIAIQSQKVYDRYMKYLTGCAKLFRQGYTDIDQFTLEK-------
MMAR_0796|M.marinum_M               AKKEEAIAIQSQKVYDRYMKYLTGCAKLFRQGYTDIDQFTLEK-------
Mb0479c|M.bovis_AF2122/97           ANKDQAIAIQSQTVYDRYMKYLTGCAKLFRQGYTDVDQFTLEK-------
Rv0470c|M.tuberculosis_H37Rv        ANKDQAIAIQSQTVYDRYMKYLTGCAKLFRQGYTDVDQFTLEK-------
MLBr_02459|M.leprae_Br4923          ANKNKAIAIQSEEVYDRYMKYLTGCAKLFRDGYTDVDQFTLEKQPATARR
MAV_4679|M.avium_104                ANREQAIAIQSQEVYDRYMKYLTGCAKLFREGYTDVNQFTMEKK------
MAB_3881|M.abscessus_ATCC_1997      AHEDEAISVQSQEVYDRYIKYLTGCAEGFREGWIDVVQFTCEK-------
                                     ..:.*:::**.  *:**:*******. * .*: *: ***  *       

Mflv_3304|M.gilvum_PYR-GCK          -
Mvan_3025|M.vanbaalenii_PYR-1       -
MSMEG_3538|M.smegmatis_MC2_155      -
TH_3139|M.thermoresistible__bu      -
MUL_4539|M.ulcerans_Agy99           -
MMAR_0796|M.marinum_M               -
Mb0479c|M.bovis_AF2122/97           -
Rv0470c|M.tuberculosis_H37Rv        -
MLBr_02459|M.leprae_Br4923          H
MAV_4679|M.avium_104                -
MAB_3881|M.abscessus_ATCC_1997      -