For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SVQLTPHFGNVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMTLEQAQIAKIDLALGKLNLEPGMTLLDI GCGWGATMRRAIEKYDVNVVGLTLSENQAAHVQQMFDQIDTSRSRRVLLEGWEKFDEPVDRIVSIGAFEH FGRLRYAHFFKMAYQALPADGIMLLHTIARPTFKEARAKGLTLTHEIVHFSQFILAEIFPGGWLPTIPTV EEHATAAGFKVTRVQSLQLHYARTLEIWAAALEAKKEEAIAIQSQKVYDRYMKYLTGCAKLFRQGYTDID QFTLEK*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4539 | pcaA | - | 100% (287) | mycolic acid synthase PcaA |
M. ulcerans Agy99 | MUL_3772 | mmaA5 | e-121 | 72.13% (287) | methoxy mycolic acid synthase 5 MmaA5 |
M. ulcerans Agy99 | MUL_0730 | mmaA3 | e-105 | 65.34% (277) | methoxy mycolic acid synthase 3, MmaA3 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0479c | pcaA | 1e-148 | 86.41% (287) | mycolic acid synthase pcaA (cyclopropane synthase) |
M. gilvum PYR-GCK | Mflv_3304 | - | 1e-118 | 69.58% (286) | cyclopropane-fatty-acyl-phospholipid synthase |
M. tuberculosis H37Rv | Rv0470c | pcaA | 1e-148 | 86.41% (287) | mycolic acid synthase pcaA (cyclopropane synthase) |
M. leprae Br4923 | MLBr_02459 | umaA2 | 1e-148 | 85.02% (287) | Mycolic acid synthase |
M. abscessus ATCC 19977 | MAB_3881 | - | 1e-104 | 64.44% (284) | cyclopropane-fatty-acyl-phospholipid synthase 1 |
M. marinum M | MMAR_0796 | pcaA | 1e-167 | 100.00% (287) | mycolic acid synthase PcaA |
M. avium 104 | MAV_4679 | - | 1e-142 | 83.86% (285) | cyclopropane-fatty-acyl-phospholipid synthase 1 |
M. smegmatis MC2 155 | MSMEG_3538 | - | 1e-117 | 69.47% (285) | cyclopropane-fatty-acyl-phospholipid synthase 1 |
M. thermoresistible (build 8) | TH_3139 | - | 1e-124 | 74.20% (283) | PUTATIVE Cyclopropane-fatty-acyl-phospholipid synthase |
M. vanbaalenii PYR-1 | Mvan_3025 | - | 1e-119 | 71.33% (286) | cyclopropane-fatty-acyl-phospholipid synthase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3304|M.gilvum_PYR-GCK MSDTPNGSADLQPHFDDVQSHYDLSDDFYRLFLDPTQTYSCAYFERDDMT Mvan_3025|M.vanbaalenii_PYR-1 MPETTSGSADLQPHFEDVQSHYDLSDDFYRLFLDPTQTYSCAYFERDDMT MSMEG_3538|M.smegmatis_MC2_155 --------MALQPHFEDVQSHYDLSDEFFRLFLDPTQTYSCAYFERDDMT TH_3139|M.thermoresistible__bu ----------LTPHFEEVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMT MUL_4539|M.ulcerans_Agy99 ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMT MMAR_0796|M.marinum_M ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPSQTYSCAYFERDDMT Mb0479c|M.bovis_AF2122/97 ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMT Rv0470c|M.tuberculosis_H37Rv ------MSVQLTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMT MLBr_02459|M.leprae_Br4923 ------MSVQLTPHFRNVQAHYDLSDDFFRLFLDPTLTYSCAYFERDDMT MAV_4679|M.avium_104 --------MQLTPHFGNVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMT MAB_3881|M.abscessus_ATCC_1997 -------MSKLTPKFSDVQAHYDLSDDFFALFLDPSRTYSCAYFEPETLT * *:* :**:******:*: *****: ******** : :* Mflv_3304|M.gilvum_PYR-GCK LEEAQRAKIDLALGKLGLEPGMTLLDIGCGWGGTLLRALEKYDVNVIGLT Mvan_3025|M.vanbaalenii_PYR-1 LEEAQIAKIDLSLGKLGLQPGMTLLDIGCGWGATLLRALDKYDVNVIGLT MSMEG_3538|M.smegmatis_MC2_155 LEEAQLAKIDLSLGKLGLQPGMKLLDIGCGWGATLRRALSRYDVDVVGLT TH_3139|M.thermoresistible__bu LEEAQLAKIDLSLGKLDLKPGMTLLDIGCGWGATIKRAVEKYDVNVVGLT MUL_4539|M.ulcerans_Agy99 LEQAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT MMAR_0796|M.marinum_M LEQAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT Mb0479c|M.bovis_AF2122/97 LQEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT Rv0470c|M.tuberculosis_H37Rv LQEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT MLBr_02459|M.leprae_Br4923 LEEAQLAKVDLALGKLKLEPGMTLLDIGCGWGATMKRAIEIYDVNVIGLT MAV_4679|M.avium_104 LEEAQIAKIDLALGKLKLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLT MAB_3881|M.abscessus_ATCC_1997 LEQAQQAKIDLALGKLNLEPGMTLLDVGCGWGSTMKRALEHYDVNVIGLT *::** **:**:**** *:***.***:*****.*: **:. ***:*:*** Mflv_3304|M.gilvum_PYR-GCK LSRNQQAHVQKVLDEHDSPRSKTVLLQGWEQFDQPVDRIVSIGAFEHFGS Mvan_3025|M.vanbaalenii_PYR-1 LSRNQQAHVQKRLDAHGSGRSKRVLLAGWEQFDEPVDRIVSIGAFEHFGR MSMEG_3538|M.smegmatis_MC2_155 LSKNQQAHVERSFAETDTERSRRVLLQGWEQFDEPVDRIVSIGAFEHFGA TH_3139|M.thermoresistible__bu LSRNQQAHVQQVLDEMDSTRSRRVLLQGWEQFREPVDRIVSIGAFEHFGR MUL_4539|M.ulcerans_Agy99 LSENQAAHVQQMFDQIDTSRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGR MMAR_0796|M.marinum_M LSENQAAHVQQMFDQIDTSRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGR Mb0479c|M.bovis_AF2122/97 LSENQAGHVQKMFDQMDTPRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGH Rv0470c|M.tuberculosis_H37Rv LSENQAGHVQKMFDQMDTPRSRRVLLEGWEKFDEPVDRIVSIGAFEHFGH MLBr_02459|M.leprae_Br4923 LSENQAAHVQKTFDELDTPRTRRVLLEGWEKFHEPVDRIVSIGAFEHFGR MAV_4679|M.avium_104 LSENQAEHVQKTFDAMDTPRTRRVLLEGWEKFHEPVDRIVSIGAFEHFGR MAB_3881|M.abscessus_ATCC_1997 LSKNQFAYVNTLLDSAGSSRNYEVRLAGWEEFEGTVDRIVSIGAFEHFGH **.** :*: : .: *. * * ***:* .************** Mflv_3304|M.gilvum_PYR-GCK DRYDEFFRRAYSVLPDDGVMLLHTIVKPSDEEFAERKLPLTMTKLKFFKF Mvan_3025|M.vanbaalenii_PYR-1 DRYDEFFKKAYQVLPDGGVMMLHTIIKPTDEEFADRGLKLTMSIVRFSKF MSMEG_3538|M.smegmatis_MC2_155 DRYDDFFRMAHTALPDDGVMLLHTIVKPSGDEMSQRGLPLTMRKLRFFKF TH_3139|M.thermoresistible__bu DRYEEFFKMAYEVLPADGIMMLHTIIKPSDEEFAARELPITMRYLRFFKF MUL_4539|M.ulcerans_Agy99 LRYAHFFKMAYQALPADGIMLLHTIARPTFKEARAKGLTLTHEIVHFSQF MMAR_0796|M.marinum_M LRYAHFFKMAYQALPADGIMLLHTIARPTFKEARAKGLTLTHEIVHFSQF Mb0479c|M.bovis_AF2122/97 QRYHHFFEVTHRTLPADGKMLLHTIVRPTFKEGREKGLTLTHELVHFTKF Rv0470c|M.tuberculosis_H37Rv QRYHHFFEVTHRTLPADGKMLLHTIVRPTFKEGREKGLTLTHELVHFTKF MLBr_02459|M.leprae_Br4923 QRYARFFKMAHEVLPADSVMLLHTIVRPTFKDARARGMTLTHEIVHFTQF MAV_4679|M.avium_104 QRYGRFFRMAYDVLPPGGIMLLHTIVRPSFKDARAKGMKLTHEIVEFSRF MAB_3881|M.abscessus_ATCC_1997 ERYDSFFAMAHRVLPSDGKMLLHTIVSHHPDEWKRMGIPLLMSRVRFIYF ** ** :: .** .. *:**** .: : : :.* * Mflv_3304|M.gilvum_PYR-GCK IMDEIFPGGMLPKVDDVEKHATKASFKVNRIQPLRLHYARTLQIWAASLE Mvan_3025|M.vanbaalenii_PYR-1 IMDEIFPGGDLPKPTTVAEHATKAGFRLTREQRLREHYAKTLDIWADALR MSMEG_3538|M.smegmatis_MC2_155 IMDEIFPGGELPYVAQVSEHAQRAGFRVDRVQSLRPHYAKTLDIWAETLR TH_3139|M.thermoresistible__bu IMDEIFPGGDLPQAKVVEEHATRAGFTVAHTQPLRLHYARTLDHWSSALE MUL_4539|M.ulcerans_Agy99 ILAEIFPGGWLPTIPTVEEHATAAGFKVTRVQSLQLHYARTLEIWAAALE MMAR_0796|M.marinum_M ILAEIFPGGWLPTIPTVEEHATAAGFKVTRVQSLQLHYARTLEIWAAALE Mb0479c|M.bovis_AF2122/97 ILAEIFPGGWLPSIPTVHEYAEKVGFRVTAVQSLQLHYARTLDMWATALE Rv0470c|M.tuberculosis_H37Rv ILAEIFPGGWLPSIPTVHEYAEKVGFRVTAVQSLQLHYARTLDMWATALE MLBr_02459|M.leprae_Br4923 ILAEIFPGGWLPTVPTVEEHATAAGFKFTRIQSLQLHYAKTLDLWAARLE MAV_4679|M.avium_104 ILAEIFPGGWLPTPQTVGEYGVTAGFDLTRVQSLQLHYARTLDLWAQALE MAB_3881|M.abscessus_ATCC_1997 IGTEIFPGGRLPSVPMVDKHAALAGFHITRHHSLQPHYARTLDCWATNLA * ****** ** * ::. ..* . : *: ***:**: *: * Mflv_3304|M.gilvum_PYR-GCK SRRDDAIAIQSEEVYDRYMKYLTGCAELFTEGYTDVCQFTLAK------- Mvan_3025|M.vanbaalenii_PYR-1 KREDDAVAIQSREDYDRYMKYLTGCADLFRDGYTDICQFTLEK------- MSMEG_3538|M.smegmatis_MC2_155 GRKDEAIAVQSEEMYERYMKYLTGCADLFREGYTDVCQFTLVKA------ TH_3139|M.thermoresistible__bu ARKDEAIAIQSEEVYERYMKYLTGCADLFRKGYTDVCQFTLKK------- MUL_4539|M.ulcerans_Agy99 AKKEEAIAIQSQKVYDRYMKYLTGCAKLFRQGYTDIDQFTLEK------- MMAR_0796|M.marinum_M AKKEEAIAIQSQKVYDRYMKYLTGCAKLFRQGYTDIDQFTLEK------- Mb0479c|M.bovis_AF2122/97 ANKDQAIAIQSQTVYDRYMKYLTGCAKLFRQGYTDVDQFTLEK------- Rv0470c|M.tuberculosis_H37Rv ANKDQAIAIQSQTVYDRYMKYLTGCAKLFRQGYTDVDQFTLEK------- MLBr_02459|M.leprae_Br4923 ANKNKAIAIQSEEVYDRYMKYLTGCAKLFRDGYTDVDQFTLEKQPATARR MAV_4679|M.avium_104 ANREQAIAIQSQEVYDRYMKYLTGCAKLFREGYTDVNQFTMEKK------ MAB_3881|M.abscessus_ATCC_1997 AHEDEAISVQSQEVYDRYIKYLTGCAEGFREGWIDVVQFTCEK------- ..:.*:::**. *:**:*******. * .*: *: *** * Mflv_3304|M.gilvum_PYR-GCK - Mvan_3025|M.vanbaalenii_PYR-1 - MSMEG_3538|M.smegmatis_MC2_155 - TH_3139|M.thermoresistible__bu - MUL_4539|M.ulcerans_Agy99 - MMAR_0796|M.marinum_M - Mb0479c|M.bovis_AF2122/97 - Rv0470c|M.tuberculosis_H37Rv - MLBr_02459|M.leprae_Br4923 H MAV_4679|M.avium_104 - MAB_3881|M.abscessus_ATCC_1997 -