For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TNPATGTFVRSRVVAWALWDCGSTGLNAMVTTFVFSVYLTSMVGEGMPGGSDPASWLGRAAAAAGLTIAL LAPLVGVWVESPHRRRVALGVLTSVTVALTCAMFLIHDSPGYLWAGLALLAATAACSDLASVPYNSMLRQ LSTPTTASRISGFGWASGYVGSVVLLILIYLGFVAGSGAHRGLLQLPAHDGFNIRVAMLLAAAWLAVLAS PLLLVAHRLPDVGTVPQPATRMLGAYRKLWADISSEWRRDRNLVYFLIASAIFRDGLAAMFAFGAVLGAN VYGLTQADVLLFGVAASVVAAVGAVVGGFVDHRVGSKPVIVASLASILISAIVLMVLSGATAFWVCGLLL CLFIGPSQSSARALLLRMAPHGKEGVAFGLYTMTGHAVAFLGPWLFSIFVDIFSAVRAGLGGICLVLAVG LVGMLVVGVPRHGGVVVTETT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_3787 | - | - | 100% (442) | integral membrane leucine and alanine rich protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2536c | - | 0.0 | 76.64% (441) | hypothetical protein Mb2536c |
| M. gilvum PYR-GCK | Mflv_2546 | - | 1e-157 | 62.70% (437) | major facilitator transporter |
| M. tuberculosis H37Rv | Rv2508c | - | 0.0 | 76.64% (441) | hypothetical protein Rv2508c |
| M. leprae Br4923 | MLBr_00430 | - | 0.0 | 74.35% (425) | hypothetical protein MLBr_00430 |
| M. abscessus ATCC 19977 | MAB_1538 | - | 1e-127 | 51.41% (426) | hypothetical protein MAB_1538 |
| M. marinum M | MMAR_3855 | - | 0.0 | 98.87% (442) | integral membrane leucine and alanine rich protein |
| M. avium 104 | MAV_1667 | - | 0.0 | 73.89% (429) | permease of the major facilitator superfamily protein |
| M. smegmatis MC2 155 | MSMEG_4721 | - | 1e-157 | 62.65% (431) | permease of the major facilitator superfamily protein |
| M. thermoresistible (build 8) | TH_1384 | - | 1e-160 | 64.00% (425) | PROBABLE CONSERVED INTEGRAL MEMBRANE LEUCINE AND ALANINE RICH |
| M. vanbaalenii PYR-1 | Mvan_4097 | - | 1e-152 | 62.71% (421) | major facilitator superfamily transporter |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2546|M.gilvum_PYR-GCK MSQVPSTTGPPT----------DAAPRARVWAWAMWDFGATAVNAIVITF
Mvan_4097|M.vanbaalenii_PYR-1 MSELSPTIGPPVGS--------AGAKRSRVLAWAMWDFGATAINAIVITF
MSMEG_4721|M.smegmatis_MC2_155 MINPG---------------------RARVVAWALWDCGSAGLNAIVITF
TH_1384|M.thermoresistible__bu MSQTRRVGRPPS----------QPAQRSQVLAWALWDCGSTGFNAIVITF
MUL_3787|M.ulcerans_Agy99 MTNP--ATGTFV--------------RSRVVAWALWDCGSTGLNAMVTTF
MMAR_3855|M.marinum_M MTNP--ATGTFV--------------RSRVVAWALWDCGSTGLNAIVTTF
MLBr_00430|M.leprae_Br4923 MNQPESVAGTMV--------------RSWVVAWAMWDCGSTGLTAIVATF
MAV_1667|M.avium_104 -----------------------------MVAWALWDCGSTGLNAIVATF
Mb2536c|M.bovis_AF2122/97 MNNPGSRAGTLL--------------HFRVVAWAMWDCGSTGLNAIVTTF
Rv2508c|M.tuberculosis_H37Rv MNNPGSRAGTLL--------------HFRVVAWAMWDCGSTGLNAIVTTF
MAB_1538|M.abscessus_ATCC_1997 MSMPGVEEPKGRQDPGPGRQLDTPTSRGRIAAWAAFDWGSAAFNTVIVMF
: *** :* *::...::: *
Mflv_2546|M.gilvum_PYR-GCK VFTVYLTAVVGDDLPGDTTPASWLGRALAAAGIVVALLAPVTGVWVDAPA
Mvan_4097|M.vanbaalenii_PYR-1 VFTVYLTSTVGDDLPGETSPASWLGRALAVAGLVVALLAPVTGVWVDAPA
MSMEG_4721|M.smegmatis_MC2_155 VFSVYLTGSVGAGLPGDTTPASWLGRALTVAGIAVAFLAPATGVWVDAPE
TH_1384|M.thermoresistible__bu VFAVYLTGTVGADLPGDTSAAGWLGRAMAAGGLAVAVLAPATGVWVEAPR
MUL_3787|M.ulcerans_Agy99 VFSVYLTSMVGEGMPGGSDPASWLGRAAAAAGLTIALLAPLVGVWVESPH
MMAR_3855|M.marinum_M VFSVYLTSMVGEGMPGGSDPASWLGRAAAAAGLTIALLAPLVGVWVESPH
MLBr_00430|M.leprae_Br4923 VFSVYLTSSVGVGMPDGISLVSWLGRAGAVAGLTIAVLAPAIGVWVESPH
MAV_1667|M.avium_104 VFAVYLTSSVGVGIGGSTTPASWLGRAAAIAGLTVALLAPAVGVWVESPH
Mb2536c|M.bovis_AF2122/97 VFSVYLTSAVGQGLPGGTSPASWLGRAGAVAGLTIGVLAPVVGVWVESPH
Rv2508c|M.tuberculosis_H37Rv VFSVYLTSAVGQGLPGGTSPASWLGRAGAVAGLTIGVLAPVVGVWVESPH
MAB_1538|M.abscessus_ATCC_1997 IFTPYLTGRVGAGLPDG-VPQGLLGWMMGLGGVLVFLLAPVIGVWADTPQ
:*: ***. ** .: . . ** .*: : .*** ***.::*
Mflv_2546|M.gilvum_PYR-GCK RRRRALTVLTGMVVLLTASLSLIRDDHHYLWPALVLLACTAACSELATVP
Mvan_4097|M.vanbaalenii_PYR-1 RRRRALAILTGLVVMLTASMSLIRDDHRYLWPGLILLACTAACGELSTVP
MSMEG_4721|M.smegmatis_MC2_155 RRRPALAVLTGCVVVVTASMSLIRDDHSYLWAGLVLLALAGACGELASVP
TH_1384|M.thermoresistible__bu RRRAALGVLTGLTVALTAAMSLIRDDHRYLWPALVLLACAAATSELATVP
MUL_3787|M.ulcerans_Agy99 RRRVALGVLTSVTVALTCAMFLIHDSPGYLWAGLALLAATAACSDLASVP
MMAR_3855|M.marinum_M RRRVALGVLTSVTVVLTCAMFLIHDSPGYLWAGLALLAATAACSDLASVP
MLBr_00430|M.leprae_Br4923 RRRVTLGVLTVLAVALTCGMSFIRDQPSYLWAGLMLLAGTAACGDLASVP
MAV_1667|M.avium_104 RRRVALSVLTALAVTLTGSMFFIRDRPGYLWAGLVLLGATAACGDLASVP
Mb2536c|M.bovis_AF2122/97 RRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGLVLLAATAASSDLSSVP
Rv2508c|M.tuberculosis_H37Rv RRRVALSVLTGTAVALTCAMFLIRDDPRYLWAGLVLLAATAASSDLSSVP
MAB_1538|M.abscessus_ATCC_1997 RRRVALGTLTTLVVAVATAMSMVREDNRYLWLGLGLYCAGSVFNELAQVP
*** :* ** .* :: .: :::: *** .* * .. .:*: **
Mflv_2546|M.gilvum_PYR-GCK YNAMLRELSTPRTSGRISGFGLALGYFGSVLALLVVYLGFISGGG----D
Mvan_4097|M.vanbaalenii_PYR-1 YNAMLRDLSTPQTSGRVSGFGLALGYFGSVLALLVVYVGFIAGAG----D
MSMEG_4721|M.smegmatis_MC2_155 YNAMLRQLSTPDNSGRVSALGLALGYSGIVVLLVLVYFGFIAGDG----D
TH_1384|M.thermoresistible__bu YNAMLRQLSTPQNSGRVSGFGWAMGYFGSVTLLLVVYAGFIAGEG----D
MUL_3787|M.ulcerans_Agy99 YNSMLRQLSTPTTASRISGFGWASGYVGSVVLLILIYLGFVAGSG----A
MMAR_3855|M.marinum_M YNSMLRQLSTPTTASRISGFGWASGYVGSVVLLILIYLGFVAGSG----A
MLBr_00430|M.leprae_Br4923 YNAMLRQLSTPATAGRISGLGWASGYVGSVVLLLLIYLGFISGTG----E
MAV_1667|M.avium_104 YNAMLRQLSTPRTAGRISGFGWAAGYVGSVLLLLVIYTGFIAGSGSGPDA
Mb2536c|M.bovis_AF2122/97 YNAMLRQLSTPSTAGRISGFGWASGYVGSVALLLVIYLGFMSGSG----S
Rv2508c|M.tuberculosis_H37Rv YNAMLRQLSTPSTAGRISGFGWASGYVGSVALLLVIYLGFMSGSG----S
MAB_1538|M.abscessus_ATCC_1997 YNAMLHGLTTPANASRVSGLGLAAAYIGGVLVLLLCYLGFISGDG----P
**:**: *:** .:.*:*.:* * .* * * *:: * **::* *
Mflv_2546|M.gilvum_PYR-GCK TRGLLALPAADGQNVRAAMLLVAAWFALFALPLLISAPRHT--GPETAPA
Mvan_4097|M.vanbaalenii_PYR-1 TRGLLHLPVADGQNVRAAMLLVAAWFAVFALPLLISPPPVL--AQTPPPR
MSMEG_4721|M.smegmatis_MC2_155 TRGLLGLPVADGQNVRAVMLLAAAWLALFAVPVFFAVPSPH--VSVPSAR
TH_1384|M.thermoresistible__bu RRGLLGLPVADGLNVRAAMLLTAAWFLLFALPVLITVPSPP--DDGHRAR
MUL_3787|M.ulcerans_Agy99 HRGLLQLPAHDGFNIRVAMLLAAAWLAVLASPLLLVAHRLPDVGTVPQPA
MMAR_3855|M.marinum_M HRGLLQLPAHDGFNIRVAMLLAAAWLAVLASPLLLVAHRLPDVGTVPQPA
MLBr_00430|M.leprae_Br4923 LRGLLQLPTHDGIYVRAAMLLAAAWLALLALPLLLTAHRLPSLGEVSHPT
MAV_1667|M.avium_104 TRGLLRVPLRDGLYVREAMLVAAAWLALFALPLLFVAHRLTESAEGYRPT
Mb2536c|M.bovis_AF2122/97 QRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPS
Rv2508c|M.tuberculosis_H37Rv QRGLLQLPVANGLNVRMAMLVAAAWLALLGLPLLLVAHRLPDSGAASHPS
MAB_1538|M.abscessus_ATCC_1997 TRGLFQVPAADGYDVRVSALLAAAWFAVFALPLVLTR-PVPDPAAPPPSS
***: :* :* :* *:.***: ::. *:.: .
Mflv_2546|M.gilvum_PYR-GCK VGFLGAYRRLWQEIGREWRRDRNFVYYLGSSAVFRDGLTGVFTFGAVLGV
Mvan_4097|M.vanbaalenii_PYR-1 VGFIGAYRRLWHDLRAEWRRDRNLVYYLGASAIFRDGLTGVFTFGAVLGV
MSMEG_4721|M.smegmatis_MC2_155 TSFIGAYRKLWSEVRSEWERDRNIVYYLLASAVFRDGLAGVFTFGAVLGV
TH_1384|M.thermoresistible__bu TGFLGAYRRLAAELAGEWRRDRNVVYYLIASAVFRDGLAGVFAFGAVLGV
MUL_3787|M.ulcerans_Agy99 TRMLGAYRKLWADISSEWRRDRNLVYFLIASAIFRDGLAAMFAFGAVLGA
MMAR_3855|M.marinum_M TRMLGAYRKLWADISSEWRRDRNLVYFLIASAIFRDGLAAMFAFGAVLGV
MLBr_00430|M.leprae_Br4923 S-MLGGYRKLWSEVSAEWRRDRNLVYFLVASALFRDGLAATLGFGAVLGV
MAV_1667|M.avium_104 S-MLGGYRKLWTEVREEWRRDRNLVYFLFASALFRDGLAAIFAFGAVLGV
Mb2536c|M.bovis_AF2122/97 TGLLGGYRKLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGV
Rv2508c|M.tuberculosis_H37Rv TGLLGGYRKLWTEISAEWRRDRNLVYFLVASAIFRDGLAAIFAFGAVLGV
MAB_1538|M.abscessus_ATCC_1997 PGVLGVYRELWRDLVEQWHMDRRIIYFLVASAIFRDGMVAMFALTPVIAN
.:* **.* :: :*. **..:*:* :**:****:.. : : .*:.
Mflv_2546|M.gilvum_PYR-GCK NVYGVSQADVLLFGVAACVVAALGSVAGGRVDDRVGSKPVIVASLVALIA
Mvan_4097|M.vanbaalenii_PYR-1 QVYGVSSADVLLFGVAACVVAAVGSVIGGRLDDRVGSKHVIVASLVSMIV
MSMEG_4721|M.smegmatis_MC2_155 SVYGISDADVLLFGISACVIAAIGAVVGGQLDDRIGSKPIIVGSLAAMIT
TH_1384|M.thermoresistible__bu TVYGVSEADVLLFGVCASVIAAIGAVLGGLVDDRVGSKPVIIGSLAAMIA
MUL_3787|M.ulcerans_Agy99 NVYGLTQADVLLFGVAASVVAAVGAVVGGFVDHRVGSKPVIVASLASILI
MMAR_3855|M.marinum_M NVYGLTQADVLLFGVAASVVAAVGAVVGGFVDHRVGSKPVIVASLASILI
MLBr_00430|M.leprae_Br4923 NAYGISQANVLMFGVVASLVAAVGAVLGGFVDHRIGSKRVIVGSLVAIIV
MAV_1667|M.avium_104 NVYGISQADVLVFGVAASVVAAVGAVLGGFVDHRVGSKPVIVASLLAIVV
Mb2536c|M.bovis_AF2122/97 NAYGLTQADVLIFGAAASVVAAVGAVLGGFVDHRIGSKPVIVGSLAAIIA
Rv2508c|M.tuberculosis_H37Rv NAYGLTQADVLIFGAAASVVAAVGAVLGGFVDHRIGSKPVIVGSLAAIIA
MAB_1538|M.abscessus_ATCC_1997 GVFHLSGADITLFGVAGNVMAAVGAVVGGLVDTRLGSKGIIVGSLAVIVS
.: :: *:: :** . ::**:*:* ** :* *:*** :*:.** ::
Mflv_2546|M.gilvum_PYR-GCK VGLTLMVLSGPMAFWACGLLLCLFIGPTLSSARTLMMRMSAHGKEGVTFG
Mvan_4097|M.vanbaalenii_PYR-1 VGLVLMVLSGVLAFWVCGLLLCLFIGPTLSSARTLMLRMCAHGKEGVTFG
MSMEG_4721|M.smegmatis_MC2_155 AGVVMMVLSGPVAFWACGLALCLFIGPTQSSARTLMLRMSAEGKEGVAFG
TH_1384|M.thermoresistible__bu TGLTLLNLSGAAAFWICGLLLCMFIGPTQSSARTLMLRMATLGKEGVAFG
MUL_3787|M.ulcerans_Agy99 SAIVLMVLSGATAFWVCGLLLCLFIGPSQSSARALLLRMAPHGKEGVAFG
MMAR_3855|M.marinum_M SAIVLMVLSGATAFWVCGLLLCLFIGPSQSSARALLLRMAPHGKEGVAFG
MLBr_00430|M.leprae_Br4923 TALTLMTLSGPLAFWVCGLVLCLFIGPSQSSSRALLLHMAKHGREGVAFG
MAV_1667|M.avium_104 LGLTLMALSGPVAFWACGLLLCMFIGPSQSSSRALLLQMAKHGREGVAFG
Mb2536c|M.bovis_AF2122/97 AALTLLTLSGPTAFWACGLLLCVFIGPAQSSARALLLHMAQHGKEGVAFG
Rv2508c|M.tuberculosis_H37Rv AALTLLTLSGPTAFWACGLLLCVFIGPAQSSARALLLHMAQHGKEGVAFG
MAB_1538|M.abscessus_ATCC_1997 LGIVMMFLTGQPAFWICGLAIAAFVGPPQSAARTLVLRMAPVGREAFVFG
.:.:: *:* *** *** :. *:**. *::*:*:::*. *:*...**
Mflv_2546|M.gilvum_PYR-GCK LYTTAGRAATFLAPWLFSVFIDVFDSYRAGMGGLVFVLALGLLLFLPVRV
Mvan_4097|M.vanbaalenii_PYR-1 FYTTAGRAATFLAPWLFSLSIDVFDSPRAGMGGLVAVLVLGLLLFLPVRA
MSMEG_4721|M.smegmatis_MC2_155 LYTTVGRAVSFLAPWLFFMFIDIFGTDRAGMGGLCLVLVAGLVGMAAVRT
TH_1384|M.thermoresistible__bu LYTTTGRAMSFLSPWMFFTFIDLFGTDRAGMAGLCVVLVAGLVAMLAVRV
MUL_3787|M.ulcerans_Agy99 LYTMTGHAVAFLGPWLFSIFVDIFSAVRAGLGGICLVLAVGLVGMLVVGV
MMAR_3855|M.marinum_M LYTMTGRAVAFLGPWLFSIFVDIFSAVRAGLGGICLVLAVGLVGMLVVRV
MLBr_00430|M.leprae_Br4923 LYTMTGRAASFVAPWSFSIFVDGFGVVRAGLGGISVVLLAGLLGMLMVRV
MAV_1667|M.avium_104 LYTMTGRAVSFVAPWLFSVFVDAFGAVRAGLGGISLVLTAGLLAMLAVRV
Mb2536c|M.bovis_AF2122/97 LYTMTGRAVSFLGPWLFSVFVDVFHTVRAGLGGVCLVLTTGLLLMLRVQV
Rv2508c|M.tuberculosis_H37Rv LYTMTGRAVSFLGPWLFSVFVDVFHTVRAGLGGVCLVLTTGLLLMLRVQV
MAB_1538|M.abscessus_ATCC_1997 LYTMTGRAVSFVGPWLFATFALLFHATRAGIAGPVLMIGLGMVAVILVKV
:** .*:* :*:.** * * ***:.* :: *:: . * .
Mflv_2546|M.gilvum_PYR-GCK PPRHGATVSASARRS--------
Mvan_4097|M.vanbaalenii_PYR-1 PHRRDPV----------------
MSMEG_4721|M.smegmatis_MC2_155 PERVTAR----------------
TH_1384|M.thermoresistible__bu PRRAG------------------
MUL_3787|M.ulcerans_Agy99 PRHGGVVVTETT-----------
MMAR_3855|M.marinum_M PRHGGVVVTETT-----------
MLBr_00430|M.leprae_Br4923 PTRREAAAVGLSWWRSQARRGQV
MAV_1667|M.avium_104 P-RRAPVAVEAA-----------
Mb2536c|M.bovis_AF2122/97 SRHGGALTTAQSS----------
Rv2508c|M.tuberculosis_H37Rv SRHGGALTTAQSS----------
MAB_1538|M.abscessus_ATCC_1997 PRYDPVRDEIVSGAG--------
.