For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSAAPDLTIALQSHFLRDLPELAVRWQAEVPPDARLLVLNEPLAGELKLDSTWLRSSEGVRFLVGSLLPS GAVPVAQAYAGHQFGGFVPRLGDGRALLLGEIADTDGRLYDIHLKGSGRTPFARGGDGLAVVGPMLREYI VSEAMHALGIPTTRSLAVVGTGRQVQRETPLPGALLVRVARSHLRVGSFQYAAATGDVELLRRLADYAIA HHYPGAADAERPYLALFEEVVAVQAALLARWMLIGFVHGVMNTDNMTISGETIDYEPCAFMEAYDPETVF SSIDHWGRYAYANQPVVAGWNLARFAEAPLPLLADDMQEGIALAEKSFGVFRTRYDAVWCSGMRAKLGLP AVTEAEVVKPLADELLQLLRQGQVDYTSFFRHLAAAARGDGGAARAMFDAPSGFDDWLSRWQNLGPDAEL MDGVNPIYIPRNHLVEEALTAATDGNLDPFRRLLDAVTDPYVERPGLEHYAGPAPEDFGAYRTYCGT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_3460 | - | - | 100% (487) | hypothetical protein MUL_3460 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1059 | - | 0.0 | 65.43% (486) | hypothetical protein Mflv_1059 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1573 | - | 0.0 | 98.97% (487) | hypothetical protein MMAR_1573 |
| M. avium 104 | MAV_3983 | - | 0.0 | 75.15% (491) | hypothetical protein MAV_3983 |
| M. smegmatis MC2 155 | MSMEG_2445 | - | 1e-179 | 63.95% (491) | hypothetical protein MSMEG_2445 |
| M. thermoresistible (build 8) | TH_1211 | - | 0.0 | 68.79% (487) | conserved hypothetical protein |
| M. vanbaalenii PYR-1 | Mvan_5772 | - | 1e-176 | 64.11% (482) | hypothetical protein Mvan_5772 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2445|M.smegmatis_MC2_155 MSVTSDAAVTLHSRFARELPELAIGWQAEPAPAPRLLVLNDALATELGLD
TH_1211|M.thermoresistible__bu VSAAPAEAVTLDNRFARELPELAVAWQAESAPDPKLLVVNEALARELGLD
Mflv_1059|M.gilvum_PYR-GCK ------MSIALGSRFAGELSELTVPWKAEEAPQPRLLVLNEPLATELGLD
Mvan_5772|M.vanbaalenii_PYR-1 ---------MLQGRFVGELPELAVPWKAEAAPQPQLLVVNEPLAAELGVD
MUL_3460|M.ulcerans_Agy99 MSAAPDLTIALQSHFLRDLPELAVRWQAEVPPDARLLVLNEPLAGELKLD
MMAR_1573|M.marinum_M MSAAPDLTIALQSHFLRDLPELAVRWQAEVPPDARLLVLNEPLAGELKLD
MAV_3983|M.avium_104 MSVAPETTVALQDRFFRELPELAVRWQAETFPELRLLALNEPLATQLGLD
* .:* :*.**:: *:** * :**.:*:.** :* :*
MSMEG_2445|M.smegmatis_MC2_155 ADWLRSPDGIGLLLGTDVPEGATPVAQAYAGHQFGGYVPRLGDGRALLLG
TH_1211|M.thermoresistible__bu PDWLRSPDGVRFLIGTSLPPGATPVAQAYAGHQFGGLVPRLGDGRALLLG
Mflv_1059|M.gilvum_PYR-GCK PDWLRGPDGLGLLTGTRVPAEASPVAQAYAGHQFGGFQPRLGDGRALLLG
Mvan_5772|M.vanbaalenii_PYR-1 ADWLRGPDGLGLLTGTVVPSDATPAAQAYAGHQFGGYQPRLGDGRALLMG
MUL_3460|M.ulcerans_Agy99 STWLRSSEGVRFLVGSLLPSGAVPVAQAYAGHQFGGFVPRLGDGRALLLG
MMAR_1573|M.marinum_M STWLRSSEGVRFLVGSLLPSGAVPVAQAYAGHQFGGFVPRLGDGRALLLG
MAV_3983|M.avium_104 TGWLRGPDGLRFLTGNLVPTGAAPVAQAYAGHQFGGFVPRLGDGRALLLG
. ***..:*: :* *. :* * *.*********** **********:*
MSMEG_2445|M.smegmatis_MC2_155 ELTDVHGRTRDLHLKGSGRTPFARGGDGLAVVGPMLREYIVSEAMHALGI
TH_1211|M.thermoresistible__bu ELVDEQGRLRDLHLKGSGATPFARGGDGLAAVGPMLREYLVSEAMHALGV
Mflv_1059|M.gilvum_PYR-GCK EIEGPDGHLHDLHLKGSGRTPFARGGDGLAAVGPMLREYVISEAMHALGI
Mvan_5772|M.vanbaalenii_PYR-1 EFVDSTGRLRDLHLKGSGRTPFARGGDGLAAVGPMLREYVISEAMHALGI
MUL_3460|M.ulcerans_Agy99 EIADTDGRLYDIHLKGSGRTPFARGGDGLAVVGPMLREYIVSEAMHALGI
MMAR_1573|M.marinum_M EIADTDGRLYDIHLKGSGRTPFARGGDGLAVVGPMLREYIVSEAMHALGI
MAV_3983|M.avium_104 ELVDDEGRLRDIHLKGSGATPFARGGDGLAAVGPMLREYVVSEAMHALGV
*: . *: *:****** ***********.********::********:
MSMEG_2445|M.smegmatis_MC2_155 PTTRSLAVVATGRDVWRETKQPGAVLARVASSHLRVGSFQYAYQYATAAK
TH_1211|M.thermoresistible__bu PTTRSLSVVATGRPVYRETELPGAVLARVASSHLRVGSFQYAALVG----
Mflv_1059|M.gilvum_PYR-GCK PTTRALAVVATGKTVYRESPLPGAVLARVASSHLRVGTFQFAPLLMRASG
Mvan_5772|M.vanbaalenii_PYR-1 PTTRALAVVATGRPVYRDTVLPGAVLARVASSHLRVGTFQYAAAVSAREG
MUL_3460|M.ulcerans_Agy99 PTTRSLAVVGTGRQVQRETPLPGALLVRVARSHLRVGSFQYAAATG----
MMAR_1573|M.marinum_M PTTRSLAVVGTGRQVQRETPLPGALLVRVARSHLRVGSFQYAAATG----
MAV_3983|M.avium_104 PTTRSLAVVGTGRPVYREATLPGAVLARVAGSHLRVGSFQYAAATG----
****:*:**.**: * *:: ***:*.*** ******:**:*
MSMEG_2445|M.smegmatis_MC2_155 DDEVLRRLADHAISRHHPQAAEADNPYLALFEAVVSAQASLLAQWMLVGF
TH_1211|M.thermoresistible__bu DEALVRRLADHAIARHHPAAADAANPYLGLFEAVISVQARLVARWMLVGF
Mflv_1059|M.gilvum_PYR-GCK NTDLLRRLADHAIARHHPAAADAEQPYLALLEAVSAAQARLVAQWMSVGF
Mvan_5772|M.vanbaalenii_PYR-1 NVDLLRRLADHAIARHHPAAAVAENRYLALLDAVSAAQAKLVAQWMLVGF
MUL_3460|M.ulcerans_Agy99 DVELLRRLADYAIAHHYPGAADAERPYLALFEEVVAVQAALLARWMLIGF
MMAR_1573|M.marinum_M DVELLRRLADYAIARHYPGAADAERPYLALFEEVVAVQAALLARWMLIGF
MAV_3983|M.avium_104 NRDLLRRLADHAIARHHPGAADAEQPYLALFEAVVAAQASLIAQWMLIGF
: ::*****:**::*:* ** * . **.*:: * :.** *:*:** :**
MSMEG_2445|M.smegmatis_MC2_155 IHGVMNTDNMTIAGETIDYGPCAFMDTFDPATVFSSIDHGGRYAYGNQPA
TH_1211|M.thermoresistible__bu VHGVMNTDNTTISGETIDYGPCAFLDVYDPATVFSSIDDRGRYAYGNQPA
Mflv_1059|M.gilvum_PYR-GCK IHGVMNTDNMTISGETIDYGPCAFMEAFDPATVFSSIDSWGRYAYGNQPS
Mvan_5772|M.vanbaalenii_PYR-1 VHGVMNTDNMTISGETIDYGPCAFMEAFDPATVFSSIDSSGRYAYGNQPA
MUL_3460|M.ulcerans_Agy99 VHGVMNTDNMTISGETIDYEPCAFMEAYDPETVFSSIDHWGRYAYANQPV
MMAR_1573|M.marinum_M VHGVMNTDNMTISGETIDYGPCAFMEAYDPETVFSSIDHWGRYAYANQPV
MAV_3983|M.avium_104 VHGVMNTDNMTISGETIDYGPCAFMEAYDPDTVFSSIDFWGRYAYGNQPV
:******** **:****** ****::.:** ******* *****.***
MSMEG_2445|M.smegmatis_MC2_155 VAHWNLARFAETLLPLIAEDVDTAVDLVTAALGQFPQQFDTAWSTGMRTK
TH_1211|M.thermoresistible__bu IAGWNLARFAEALLPLLADDTDRAIAVATQALQGFPGQYEAAWTAGMRTK
Mflv_1059|M.gilvum_PYR-GCK IALWNLARFAEALLPLLADDAEAGIAVAEASLGEFQGLYEAAWTDAMARK
Mvan_5772|M.vanbaalenii_PYR-1 ITLWNLARFAETLLPLIHENSGAAIALAEASLDSFAGLYETAWTDGMRAK
MUL_3460|M.ulcerans_Agy99 VAGWNLARFAEAPLPLLADDMQEGIALAEKSFGVFRTRYDAVWCSGMRAK
MMAR_1573|M.marinum_M VAGWNLARFAEALLPLLADDMQEGIALAEKSFGVFRTRYDAVWCSGMRAK
MAV_3983|M.avium_104 IAGWNLARFAETLLPLFSENTEEAIALAERSFGVFQTRYDAVWAAGMRAK
:: ********: ***: :: .: :. :: * :::.* .* *
MSMEG_2445|M.smegmatis_MC2_155 LGLSARVDHTTATALVNDLLVLLQQTRTDYTSAFRDLGRVARG-----AQ
TH_1211|M.thermoresistible__bu LGFRANADIP--KELIDDLLAQLIQSHIDYTSFFRTLSRAARGD----TE
Mflv_1059|M.gilvum_PYR-GCK LGVAG-ASADTVEALVGDLLTQLQQSGLDWTLFFRRLAGAARGD----AE
Mvan_5772|M.vanbaalenii_PYR-1 LGVPG-APAESVTPLIEQLLPQMQQSHVDYTLFYRLLAGAARGD----AE
MUL_3460|M.ulcerans_Agy99 LGLPAVTEAEVVKPLADELLQLLRQGQVDYTSFFRHLAAAARGD----GG
MMAR_1573|M.marinum_M LGLPAVTEAEVVKPLADELLQLLQQGQVDYTSFFRHLAAAARGD----GG
MAV_3983|M.avium_104 LGLPAQVDAEFAAALIDELLALLKANHVDYTSFFRQLGRAARGDDRSAAE
**. . . * :** : *:* :* *. .***
MSMEG_2445|M.smegmatis_MC2_155 PS------LPFTDEWLSRWRACDPDPDVMDRVNPVYIPRNHLVEDALTAA
TH_1211|M.thermoresistible__bu PARGVFLDLAEFDRWLSRWRDLDPDPELMDRSNPVYIPRNHLVEQALSAA
Mflv_1059|M.gilvum_PYR-GCK PVRGEFIDLATFDGWLQRWRDLGPDADAMDRVNPVYIPRNHLVEEALTAA
Mvan_5772|M.vanbaalenii_PYR-1 PVRGEFIDLAAFDEWLGRWRALEPDPAVMDRVNPVYIPRNHLVEDALTAA
MUL_3460|M.ulcerans_Agy99 AARAMFDAPSGFDDWLSRWQNLGPDAELMDGVNPIYIPRNHLVEEALTAA
MMAR_1573|M.marinum_M AARAMFDAPSGFDDWLSRWQNLGPDAELMDGVNPIYIPRNHLVEEALTAA
MAV_3983|M.avium_104 PAREMFMDLPGFDAWLARWRALGPDADAMDRVNPIYIPRNHLVEEALAAA
. . * ** **: **. ** **:*********:**:**
MSMEG_2445|M.smegmatis_MC2_155 TTGDLAPLATLMTALKTPFTERAGFEAHAAPAPEDFGP-YRTFCGT
TH_1211|M.thermoresistible__bu VDGDMEPFRRLLTVVTDPFTERPGLERYTEPAPESFGP-YQTFCGT
Mflv_1059|M.gilvum_PYR-GCK TGGDLGPVEKLLDAIRSPFDVRAGLDRYAEPGPREFSASFQTFCGT
Mvan_5772|M.vanbaalenii_PYR-1 TGGDLGPLQQLLTAVTAPFEERPGSERFAEPGEKEFSASFQTFCGT
MUL_3460|M.ulcerans_Agy99 TDGNLDPFRRLLDAVTDPYVERPGLEHYAGPAPEDFGA-YRTYCGT
MMAR_1573|M.marinum_M TDGNLDPFRRLLDAVTDPYVERPGLERYAGPAPEDFGA-YRTYCGT
MAV_3983|M.avium_104 TDGDLDPLDQLLAAVTAPYTERPGFERYASPAPEDFGK-YQTFCGT
. *:: *. *: .: *: *.* : .: *. ..*. ::*:***