For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSVAPETTVALQDRFFRELPELAVRWQAETFPELRLLALNEPLATQLGLDTGWLRGPDGLRFLTGNLVPT GAAPVAQAYAGHQFGGFVPRLGDGRALLLGELVDDEGRLRDIHLKGSGATPFARGGDGLAAVGPMLREYV VSEAMHALGVPTTRSLAVVGTGRPVYREATLPGAVLARVAGSHLRVGSFQYAAATGNRDLLRRLADHAIA RHHPGAADAEQPYLALFEAVVAAQASLIAQWMLIGFVHGVMNTDNMTISGETIDYGPCAFMEAYDPDTVF SSIDFWGRYAYGNQPVIAGWNLARFAETLLPLFSENTEEAIALAERSFGVFQTRYDAVWAAGMRAKLGLP AQVDAEFAAALIDELLALLKANHVDYTSFFRQLGRAARGDDRSAAEPAREMFMDLPGFDAWLARWRALGP DADAMDRVNPIYIPRNHLVEEALAAATDGDLDPLDQLLAAVTAPYTERPGFERYASPAPEDFGKYQTFCG T
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3983 | - | - | 100% (491) | hypothetical protein MAV_3983 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1059 | - | 0.0 | 69.53% (489) | hypothetical protein Mflv_1059 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1573 | - | 0.0 | 75.97% (491) | hypothetical protein MMAR_1573 |
M. smegmatis MC2 155 | MSMEG_2445 | - | 0.0 | 67.88% (495) | hypothetical protein MSMEG_2445 |
M. thermoresistible (build 8) | TH_1211 | - | 0.0 | 71.49% (491) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3460 | - | 0.0 | 75.15% (491) | hypothetical protein MUL_3460 |
M. vanbaalenii PYR-1 | Mvan_5772 | - | 0.0 | 71.19% (486) | hypothetical protein Mvan_5772 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2445|M.smegmatis_MC2_155 MSVTSDAAVTLHSRFARELPELAIGWQAEPAPAPRLLVLNDALATELGLD TH_1211|M.thermoresistible__bu VSAAPAEAVTLDNRFARELPELAVAWQAESAPDPKLLVVNEALARELGLD Mflv_1059|M.gilvum_PYR-GCK ------MSIALGSRFAGELSELTVPWKAEEAPQPRLLVLNEPLATELGLD Mvan_5772|M.vanbaalenii_PYR-1 ---------MLQGRFVGELPELAVPWKAEAAPQPQLLVVNEPLAAELGVD MMAR_1573|M.marinum_M MSAAPDLTIALQSHFLRDLPELAVRWQAEVPPDARLLVLNEPLAGELKLD MUL_3460|M.ulcerans_Agy99 MSAAPDLTIALQSHFLRDLPELAVRWQAEVPPDARLLVLNEPLAGELKLD MAV_3983|M.avium_104 MSVAPETTVALQDRFFRELPELAVRWQAETFPELRLLALNEPLATQLGLD * .:* :*.**:: *:** * :**.:*:.** :* :* MSMEG_2445|M.smegmatis_MC2_155 ADWLRSPDGIGLLLGTDVPEGATPVAQAYAGHQFGGYVPRLGDGRALLLG TH_1211|M.thermoresistible__bu PDWLRSPDGVRFLIGTSLPPGATPVAQAYAGHQFGGLVPRLGDGRALLLG Mflv_1059|M.gilvum_PYR-GCK PDWLRGPDGLGLLTGTRVPAEASPVAQAYAGHQFGGFQPRLGDGRALLLG Mvan_5772|M.vanbaalenii_PYR-1 ADWLRGPDGLGLLTGTVVPSDATPAAQAYAGHQFGGYQPRLGDGRALLMG MMAR_1573|M.marinum_M STWLRSSEGVRFLVGSLLPSGAVPVAQAYAGHQFGGFVPRLGDGRALLLG MUL_3460|M.ulcerans_Agy99 STWLRSSEGVRFLVGSLLPSGAVPVAQAYAGHQFGGFVPRLGDGRALLLG MAV_3983|M.avium_104 TGWLRGPDGLRFLTGNLVPTGAAPVAQAYAGHQFGGFVPRLGDGRALLLG . ***..:*: :* *. :* * *.*********** **********:* MSMEG_2445|M.smegmatis_MC2_155 ELTDVHGRTRDLHLKGSGRTPFARGGDGLAVVGPMLREYIVSEAMHALGI TH_1211|M.thermoresistible__bu ELVDEQGRLRDLHLKGSGATPFARGGDGLAAVGPMLREYLVSEAMHALGV Mflv_1059|M.gilvum_PYR-GCK EIEGPDGHLHDLHLKGSGRTPFARGGDGLAAVGPMLREYVISEAMHALGI Mvan_5772|M.vanbaalenii_PYR-1 EFVDSTGRLRDLHLKGSGRTPFARGGDGLAAVGPMLREYVISEAMHALGI MMAR_1573|M.marinum_M EIADTDGRLYDIHLKGSGRTPFARGGDGLAVVGPMLREYIVSEAMHALGI MUL_3460|M.ulcerans_Agy99 EIADTDGRLYDIHLKGSGRTPFARGGDGLAVVGPMLREYIVSEAMHALGI MAV_3983|M.avium_104 ELVDDEGRLRDIHLKGSGATPFARGGDGLAAVGPMLREYVVSEAMHALGV *: . *: *:****** ***********.********::********: MSMEG_2445|M.smegmatis_MC2_155 PTTRSLAVVATGRDVWRETKQPGAVLARVASSHLRVGSFQYAYQYATAAK TH_1211|M.thermoresistible__bu PTTRSLSVVATGRPVYRETELPGAVLARVASSHLRVGSFQYAALVG---- Mflv_1059|M.gilvum_PYR-GCK PTTRALAVVATGKTVYRESPLPGAVLARVASSHLRVGTFQFAPLLMRASG Mvan_5772|M.vanbaalenii_PYR-1 PTTRALAVVATGRPVYRDTVLPGAVLARVASSHLRVGTFQYAAAVSAREG MMAR_1573|M.marinum_M PTTRSLAVVGTGRQVQRETPLPGALLVRVARSHLRVGSFQYAAATG---- MUL_3460|M.ulcerans_Agy99 PTTRSLAVVGTGRQVQRETPLPGALLVRVARSHLRVGSFQYAAATG---- MAV_3983|M.avium_104 PTTRSLAVVGTGRPVYREATLPGAVLARVAGSHLRVGSFQYAAATG---- ****:*:**.**: * *:: ***:*.*** ******:**:* MSMEG_2445|M.smegmatis_MC2_155 DDEVLRRLADHAISRHHPQAAEADNPYLALFEAVVSAQASLLAQWMLVGF TH_1211|M.thermoresistible__bu DEALVRRLADHAIARHHPAAADAANPYLGLFEAVISVQARLVARWMLVGF Mflv_1059|M.gilvum_PYR-GCK NTDLLRRLADHAIARHHPAAADAEQPYLALLEAVSAAQARLVAQWMSVGF Mvan_5772|M.vanbaalenii_PYR-1 NVDLLRRLADHAIARHHPAAAVAENRYLALLDAVSAAQAKLVAQWMLVGF MMAR_1573|M.marinum_M DVELLRRLADYAIARHYPGAADAERPYLALFEEVVAVQAALLARWMLIGF MUL_3460|M.ulcerans_Agy99 DVELLRRLADYAIAHHYPGAADAERPYLALFEEVVAVQAALLARWMLIGF MAV_3983|M.avium_104 NRDLLRRLADHAIARHHPGAADAEQPYLALFEAVVAAQASLIAQWMLIGF : ::*****:**::*:* ** * . **.*:: * :.** *:*:** :** MSMEG_2445|M.smegmatis_MC2_155 IHGVMNTDNMTIAGETIDYGPCAFMDTFDPATVFSSIDHGGRYAYGNQPA TH_1211|M.thermoresistible__bu VHGVMNTDNTTISGETIDYGPCAFLDVYDPATVFSSIDDRGRYAYGNQPA Mflv_1059|M.gilvum_PYR-GCK IHGVMNTDNMTISGETIDYGPCAFMEAFDPATVFSSIDSWGRYAYGNQPS Mvan_5772|M.vanbaalenii_PYR-1 VHGVMNTDNMTISGETIDYGPCAFMEAFDPATVFSSIDSSGRYAYGNQPA MMAR_1573|M.marinum_M VHGVMNTDNMTISGETIDYGPCAFMEAYDPETVFSSIDHWGRYAYANQPV MUL_3460|M.ulcerans_Agy99 VHGVMNTDNMTISGETIDYEPCAFMEAYDPETVFSSIDHWGRYAYANQPV MAV_3983|M.avium_104 VHGVMNTDNMTISGETIDYGPCAFMEAYDPDTVFSSIDFWGRYAYGNQPV :******** **:****** ****::.:** ******* *****.*** MSMEG_2445|M.smegmatis_MC2_155 VAHWNLARFAETLLPLIAEDVDTAVDLVTAALGQFPQQFDTAWSTGMRTK TH_1211|M.thermoresistible__bu IAGWNLARFAEALLPLLADDTDRAIAVATQALQGFPGQYEAAWTAGMRTK Mflv_1059|M.gilvum_PYR-GCK IALWNLARFAEALLPLLADDAEAGIAVAEASLGEFQGLYEAAWTDAMARK Mvan_5772|M.vanbaalenii_PYR-1 ITLWNLARFAETLLPLIHENSGAAIALAEASLDSFAGLYETAWTDGMRAK MMAR_1573|M.marinum_M VAGWNLARFAEALLPLLADDMQEGIALAEKSFGVFRTRYDAVWCSGMRAK MUL_3460|M.ulcerans_Agy99 VAGWNLARFAEAPLPLLADDMQEGIALAEKSFGVFRTRYDAVWCSGMRAK MAV_3983|M.avium_104 IAGWNLARFAETLLPLFSENTEEAIALAERSFGVFQTRYDAVWAAGMRAK :: ********: ***: :: .: :. :: * :::.* .* * MSMEG_2445|M.smegmatis_MC2_155 LGLSARVDHTTATALVNDLLVLLQQTRTDYTSAFRDLGRVARG-----AQ TH_1211|M.thermoresistible__bu LGFRANADIP--KELIDDLLAQLIQSHIDYTSFFRTLSRAARGD----TE Mflv_1059|M.gilvum_PYR-GCK LGVAG-ASADTVEALVGDLLTQLQQSGLDWTLFFRRLAGAARGD----AE Mvan_5772|M.vanbaalenii_PYR-1 LGVPG-APAESVTPLIEQLLPQMQQSHVDYTLFYRLLAGAARGD----AE MMAR_1573|M.marinum_M LGLPAVTEAEVVKPLADELLQLLQQGQVDYTSFFRHLAAAARGD----GG MUL_3460|M.ulcerans_Agy99 LGLPAVTEAEVVKPLADELLQLLRQGQVDYTSFFRHLAAAARGD----GG MAV_3983|M.avium_104 LGLPAQVDAEFAAALIDELLALLKANHVDYTSFFRQLGRAARGDDRSAAE **. . . * :** : *:* :* *. .*** MSMEG_2445|M.smegmatis_MC2_155 PS------LPFTDEWLSRWRACDPDPDVMDRVNPVYIPRNHLVEDALTAA TH_1211|M.thermoresistible__bu PARGVFLDLAEFDRWLSRWRDLDPDPELMDRSNPVYIPRNHLVEQALSAA Mflv_1059|M.gilvum_PYR-GCK PVRGEFIDLATFDGWLQRWRDLGPDADAMDRVNPVYIPRNHLVEEALTAA Mvan_5772|M.vanbaalenii_PYR-1 PVRGEFIDLAAFDEWLGRWRALEPDPAVMDRVNPVYIPRNHLVEDALTAA MMAR_1573|M.marinum_M AARAMFDAPSGFDDWLSRWQNLGPDAELMDGVNPIYIPRNHLVEEALTAA MUL_3460|M.ulcerans_Agy99 AARAMFDAPSGFDDWLSRWQNLGPDAELMDGVNPIYIPRNHLVEEALTAA MAV_3983|M.avium_104 PAREMFMDLPGFDAWLARWRALGPDADAMDRVNPIYIPRNHLVEEALAAA . . * ** **: **. ** **:*********:**:** MSMEG_2445|M.smegmatis_MC2_155 TTGDLAPLATLMTALKTPFTERAGFEAHAAPAPEDFGP-YRTFCGT TH_1211|M.thermoresistible__bu VDGDMEPFRRLLTVVTDPFTERPGLERYTEPAPESFGP-YQTFCGT Mflv_1059|M.gilvum_PYR-GCK TGGDLGPVEKLLDAIRSPFDVRAGLDRYAEPGPREFSASFQTFCGT Mvan_5772|M.vanbaalenii_PYR-1 TGGDLGPLQQLLTAVTAPFEERPGSERFAEPGEKEFSASFQTFCGT MMAR_1573|M.marinum_M TDGNLDPFRRLLDAVTDPYVERPGLERYAGPAPEDFGA-YRTYCGT MUL_3460|M.ulcerans_Agy99 TDGNLDPFRRLLDAVTDPYVERPGLEHYAGPAPEDFGA-YRTYCGT MAV_3983|M.avium_104 TDGDLDPLDQLLAAVTAPYTERPGFERYASPAPEDFGK-YQTFCGT . *:: *. *: .: *: *.* : .: *. ..*. ::*:***