For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ATSKVERMVNLVIALLSTRGYITAEKVRSSVAGYSDSPTAEAFSRMFERDKNELRDLGIPLEVGRVSSTD PTEGYRINRDAYALPPVELTPDETAAVAVATQLWESPELITATQGALLKLRAAGVDVDPDAPVAIASPAG VPGLRGSEDVLGILLAAIDSGQAVRFPHRASRHEPYVTRTVEPWGVVTEKGRWYLVGHDRDRGATRTFRL SRIGADVAPVGAPGESKIPEDVDLRQIVARTVAESPTGMQATVWVADGRATALRRAGPSMGPRRLAGRDG EVIKLEIGSSDRLARDITGHGADAIVLEPPALREDVLARLRALAGVEEALA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_2328 | - | - | 100% (332) | hypothetical protein MUL_2328 |
| M. ulcerans Agy99 | MUL_2327 | - | 7e-08 | 27.43% (237) | hypothetical protein MUL_2327 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2123c | - | 1e-150 | 82.67% (329) | hypothetical protein Mb2123c |
| M. gilvum PYR-GCK | Mflv_3091 | - | 1e-131 | 71.52% (330) | hypothetical protein Mflv_3091 |
| M. tuberculosis H37Rv | Rv2096c | - | 1e-150 | 82.67% (329) | hypothetical protein Rv2096c |
| M. leprae Br4923 | MLBr_01329 | - | 1e-141 | 77.68% (327) | hypothetical protein MLBr_01329 |
| M. abscessus ATCC 19977 | MAB_2185 | - | 1e-125 | 67.68% (328) | hypothetical protein MAB_2185 |
| M. marinum M | MMAR_3082 | - | 0.0 | 98.49% (332) | hypothetical protein MMAR_3082 |
| M. avium 104 | MAV_2407 | - | 1e-148 | 80.24% (334) | hypothetical protein MAV_2407 |
| M. smegmatis MC2 155 | MSMEG_1359 | - | 1e-11 | 27.62% (315) | DeoR-family protein transcriptional regulator |
| M. thermoresistible (build 8) | TH_3928 | - | 3e-18 | 56.76% (74) | PUTATIVE conserved hypothetical protein |
| M. vanbaalenii PYR-1 | Mvan_3444 | - | 1e-128 | 69.49% (331) | hypothetical protein Mvan_3444 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3091|M.gilvum_PYR-GCK MCPDAHIACRKGFLARLKLIAVAISKVERLMNLVIALLSTRSFITADRIR
Mvan_3444|M.vanbaalenii_PYR-1 ---------------------MGISKVERLMNLVIALLSTRSFITADRIR
MUL_2328|M.ulcerans_Agy99 ---------------------MATSKVERMVNLVIALLSTRGYITAEKVR
MMAR_3082|M.marinum_M ---------------------MATSKVERMVNLVIALLSTRGYITAEKVR
Mb2123c|M.bovis_AF2122/97 ---------------------MATSKVERLVNLVIALLSTRGYITAEKIR
Rv2096c|M.tuberculosis_H37Rv ---------------------MATSKVERLVNLVIALLSTRGYITAEKIR
MAV_2407|M.avium_104 -------------------MPMATSKVERLVNLVIALLSTRGYITAEKIR
MLBr_01329|M.leprae_Br4923 ---------------------MATSKVERLVNLVIALLSTRGYMTAEKIR
MAB_2185|M.abscessus_ATCC_1997 ---------------------MAISKVERLMNLVICLLSTRTYVTAERIR
TH_3928|M.thermoresistible__bu --------------------------------------------------
MSMEG_1359|M.smegmatis_MC2_155 --------------------MARTVDTTGRVVQLLGLLQSRRVWTGEELA
Mflv_3091|M.gilvum_PYR-GCK ETVYGYSGAASDEAFSRMFERDKNELRDLGIPLETGRASSSDPAEGYRIN
Mvan_3444|M.vanbaalenii_PYR-1 ETVFGYSDDASDEAFSRMFERDKNELRDLGIPLETGRVSPSDPAEGYRIN
MUL_2328|M.ulcerans_Agy99 SSVAGYSDSPTAEAFSRMFERDKNELRDLGIPLEVGRVSSTDPTEGYRIN
MMAR_3082|M.marinum_M SSVAGYSDSPTAEAFSRMFERDKNELRDLGIPLEVGRVSSTDPTEGYRIN
Mb2123c|M.bovis_AF2122/97 SSVAGYSDSPSVEAFSRMFERDKNELRDLGIPLEVGRVSALEPTEGYRIN
Rv2096c|M.tuberculosis_H37Rv SSVAGYSDSPSVEAFSRMFERDKNELRDLGIPLEVGRVSALEPTEGYRIN
MAV_2407|M.avium_104 SSVAGYSESASAEAFSRMFERDKNELRDLGIPLEVGRVSPMDPTEGYRIN
MLBr_01329|M.leprae_Br4923 SSVAGYSDSPTVEAFSRMFERDKNELRDLGIPLEVGKVSALDPSEGYRIN
MAB_2185|M.abscessus_ATCC_1997 TSVAGYSDSPSDEAFSRMFERDKNELRDLGIPLETGKVSSFDATEGYRIR
TH_3928|M.thermoresistible__bu --------------------------------------------------
MSMEG_1359|M.smegmatis_MC2_155 ERLG---------VTGRSVRRDIERLRELGYPVHASKGQG----GGYQLG
Mflv_3091|M.gilvum_PYR-GCK REAYALPAVELTPDEAAAVAVATQLWQSPELITATQGALLKLRAAGIEVE
Mvan_3444|M.vanbaalenii_PYR-1 RESYALPAVELTPDEAAAVAVATQLWESPELITATQSALLKLRAAGIDIE
MUL_2328|M.ulcerans_Agy99 RDAYALPPVELTPDETAAVAVATQLWESPELITATQGALLKLRAAGVDVD
MMAR_3082|M.marinum_M RDAYALPPVELTPDETAAVAVATQLWESPELITATQGALLKLRAAGVDVD
Mb2123c|M.bovis_AF2122/97 RDAYALSPVELTPDEAAAVAVATQLWESPELITATQGALLKLRAAGVDVD
Rv2096c|M.tuberculosis_H37Rv RDAYALSPVELTPDEAAAVAVATQLWESPELITATQGALLKLRAAGVDVD
MAV_2407|M.avium_104 RDAYALAPVDLTPDEAAAVAVATQLWESPELITATQGALLKLRAAGVDVD
MLBr_01329|M.leprae_Br4923 RDAYALPPVELTPDEAAAVAVATQLWESQELITATQGALLKLRAAGVDID
MAB_2185|M.abscessus_ATCC_1997 RDAYELPDITLTADESAAVAVATQLWQSPELVTAAQGALMKLRAAGVDVD
TH_3928|M.thermoresistible__bu --------------------------------------------------
MSMEG_1359|M.smegmatis_MC2_155 -AGMALPPLLLDPDEAVAMAVCLRLAAGGSVAGVGESALRALSKLDQVMP
Mflv_3091|M.gilvum_PYR-GCK A--PDGDVAITSTAALPGLRGSE-----EVLGILLSAIDSGRAVTFSYRP
Mvan_3444|M.vanbaalenii_PYR-1 A--ADDDIAITSTAALPGLRGSE-----EVLGILLSAIDSGRAVRFRHRP
MUL_2328|M.ulcerans_Agy99 ---PDAPVAIASPAGVPGLRGSE-----DVLGILLAAIDSGQAVRFPHRA
MMAR_3082|M.marinum_M ---PDAPVAIASPAGVPGLRGSE-----DVLGILLAAIDSGQAVRFPHRA
Mb2123c|M.bovis_AF2122/97 PLDTGAPVAIASAAAVSGLRGSE-----DVLGILLSAIDSGQVVQFSHRS
Rv2096c|M.tuberculosis_H37Rv PLDTGAPVAIASAAAVSGLRGSE-----DVLGILLSAIDSGQVVQFSHRS
MAV_2407|M.avium_104 PLDDGAPVAIASPAGVPGLRGSE-----EVLGILLSAIDSRQAVQFPHRP
MLBr_01329|M.leprae_Br4923 PLDT--PVVIASSSGVSSLRGSE-----DFLSILLSAIGSRQAVQFPYRP
MAB_2185|M.abscessus_ATCC_1997 P--AAENVSVAAPAAMPGGRGSE-----SVLRILLSAIDSGQAVQFGHRP
TH_3928|M.thermoresistible__bu --------------------------------------------------
MSMEG_1359|M.smegmatis_MC2_155 ARLRSQVAAIHDATVTLGPNATDTAVAPDVLMTLARACRDREHVSTGYTD
Mflv_3091|M.gilvum_PYR-GCK ARSEPYVTRTLEPWGVVTDRGRWYVVGHDRDRDDVRTFRLSRIGADVMPT
Mvan_3444|M.vanbaalenii_PYR-1 SRSEPYMTRTVEPWGVVTDRGRWYLVGHDRDRDAVRTFRLSRIGADVTPI
MUL_2328|M.ulcerans_Agy99 SRHEPYVTRTVEPWGVVTEKGRWYLVGHDRDRGATRTFRLSRIGADVAPV
MMAR_3082|M.marinum_M SRHEPYVTRTVEPWGVVTEKGRWYLVGHDRDRGATRTFRLSRIGADVAPV
Mb2123c|M.bovis_AF2122/97 SRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATRVFRLSRIGAQVTPI
Rv2096c|M.tuberculosis_H37Rv SRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATRVFRLSRIGAQVTPI
MAV_2407|M.avium_104 SRAEPYATRTVEPWGVVTQKGRWYLVGHDRDRDATRTFRLSRIGPGVTPI
MLBr_01329|M.leprae_Br4923 SRAEPYTMRNVEPWGVITENSCWYLVGHDCDRNATRTFRLSRIGSEVAPI
MAB_2185|M.abscessus_ATCC_1997 SRTEPYVTRTVEPWGVITDRGRWYLVGHDRDRDATRTFRLSRIGEDVTKI
TH_3928|M.thermoresistible__bu --------------------------------------------------
MSMEG_1359|M.smegmatis_MC2_155 LRGN-QTQRRLEPYQLVTTGRRWYLMAYDRDREDWRSLRLDRMS-DVRAT
Mflv_3091|M.gilvum_PYR-GCK GPTGVVRKPDGVDLRAIVARVVGEW---PAAGKATVWVADGRATALRRQG
Mvan_3444|M.vanbaalenii_PYR-1 GDAGSVSRPDGIDLREIVKRVVGDW---PATGQARVWVAEGRATALRRRG
MUL_2328|M.ulcerans_Agy99 GAPGESKIPEDVDLRQIVARTVAES---PTGMQATVWVADGRATALRRAG
MMAR_3082|M.marinum_M GAPGEAEVPEDVDLRQIVARTVAES---PTGMQATVWVADGRATALRRAG
Mb2123c|M.bovis_AF2122/97 GPAGATTVPAGVDLRSIVAQKVTEV---PTGEQATVWVAEGRATALRRAG
Rv2096c|M.tuberculosis_H37Rv GPAGATTVPAGVDLRSIVAQKVTEV---PTGEQATVWVAEGRATALRRAG
MAV_2407|M.avium_104 GPPGAVTVPDGVDLRRIVAQTVTDVSATPAGGQARVWVADGRATALRRAG
MLBr_01329|M.leprae_Br4923 GPAGAVTVPDGVDLRRIVSDAVAEV---STGATARVWVVDGRATALRHAG
MAB_2185|M.abscessus_ATCC_1997 EKPGTIRRPEGADLRAIVAAAVGDG---PVRITARVWIAEGRAQELRRMG
TH_3928|M.thermoresistible__bu -------------------------------------VADGRAMTLRRQA
MSMEG_1359|M.smegmatis_MC2_155 G--TTFTARPAPDAAAYVGRAISAS---AYPYVARVRYFAPEKVVAQRFP
. ::
Mflv_3091|M.gilvum_PYR-GCK TVLGPRTVGGRSGEEISVDIGMFDRLAREVAGYGADALVLEPESLREDVI
Mvan_3444|M.vanbaalenii_PYR-1 TVVGPKMVGGRAGDEITVDIGMFDRLAREVASYGADALALEPQSLRDDVI
MUL_2328|M.ulcerans_Agy99 PSMGPRRLAGRDGEVIKLEIGSSDRLARDITGHGADAIVLEPPALREDVL
MMAR_3082|M.marinum_M RSMGPRRLAGRDGEVIELEIGSSDRLARDITGHGADAIVLEPPALREDVL
Mb2123c|M.bovis_AF2122/97 RSAGPRQLGGRDGEVIELEIRSSDRLAREITGYGADAIVLQPGSLRDDVL
Rv2096c|M.tuberculosis_H37Rv RSAGPRQLGGRDGEVIELEIRSSDRLAREITGYGADAIVLQPGSLRDDVL
MAV_2407|M.avium_104 RPVGTRQLGGRDGEVIELDIRATDQLARDIAGYGADAVVLEPQSLRDDVL
MLBr_01329|M.leprae_Br4923 RPAGVRRLGGRDGQVIELDIGSIDRLARDIAGHGADAVVLEPDALRDDVL
MAB_2185|M.abscessus_ATCC_1997 VVVDSRRLGERDGDIVEIDVASPDRLVRSIASHGADAVALEPAQVRDEVV
TH_3928|M.thermoresistible__bu TAAEPMTLAGRNGQVLTLEVGTGDRMAREIASYGPDAVALEPVSLRADVI
MSMEG_1359|M.smegmatis_MC2_155 PGTATFEPDGPDACIVTSGAEYPEQLAMYFATVGHDFEVLEPAEVIDAVG
. : :::. .: * * .*:* : *
Mflv_3091|M.gilvum_PYR-GCK ARLEAHLAPVEAGKGADRL------
Mvan_3444|M.vanbaalenii_PYR-1 ARLRAQLSTVSEVEAR---------
MUL_2328|M.ulcerans_Agy99 ARLRALAGVEEALA-----------
MMAR_3082|M.marinum_M ARLRALAGVEEALA-----------
Mb2123c|M.bovis_AF2122/97 ARLRAQAGALA--------------
Rv2096c|M.tuberculosis_H37Rv ARLRAQAGALA--------------
MAV_2407|M.avium_104 ARLRAHAGADAVGAGRPGGRGGVSA
MLBr_01329|M.leprae_Br4923 IRLRAHAGTGPS-------------
MAB_2185|M.abscessus_ATCC_1997 ARLQEQAGVTA--------------
TH_3928|M.thermoresistible__bu ERLRAQAGVSEERIAQ---------
MSMEG_1359|M.smegmatis_MC2_155 AMADRLRRAVR--------------