For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TQTNGEGTFPVGTFTPDPRPSAVPRMLAAQFGLELKLLLRNGEQLLLTMFIPITLLIGLTLLPLGSFGQH RAATFVPVIMALAVISTAFTGQAIAVAFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIVLGAI GFALGWRPALAALALGGAVIALGTAGFAALGLLLGGTLRAEIVLAIANLMWFVFAGFGALTVETDVIPTA VKWAARLTPSGALTEALSRAMVLSVDWFGVVVLAVWGTLAALAARRWFRFT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1858 | - | - | 100% (262) | antibiotic ABC transporter transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1492c | - | 1e-128 | 87.79% (262) | unidentified antibiotic-transport integral membrane ABC |
M. gilvum PYR-GCK | Mflv_3681 | - | 1e-115 | 80.78% (255) | multidrug ABC transporter inner membrane protein |
M. tuberculosis H37Rv | Rv1457c | - | 1e-128 | 87.79% (262) | unidentified antibiotic-transport integral membrane ABC |
M. leprae Br4923 | MLBr_00589 | - | 1e-121 | 83.02% (265) | hypothetical protein MLBr_00589 |
M. abscessus ATCC 19977 | MAB_2753 | - | 1e-103 | 75.88% (257) | ABC transporter permease |
M. marinum M | MMAR_2262 | - | 1e-144 | 99.62% (262) | antibiotic ABC transporter transmembrane protein |
M. avium 104 | MAV_3322 | - | 1e-127 | 89.41% (255) | ABC transporter efflux protein, DrrB family protein |
M. smegmatis MC2 155 | MSMEG_3118 | - | 1e-116 | 82.21% (253) | ABC transporter efflux protein, DrrB family protein |
M. thermoresistible (build 8) | TH_0342 | - | 1e-112 | 80.00% (255) | PROBABLE UNIDENTIFIED ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE |
M. vanbaalenii PYR-1 | Mvan_2729 | - | 1e-116 | 81.64% (256) | multidrug ABC transporter inner membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3681|M.gilvum_PYR-GCK MS------VENRFAPGTFTPDPRPAKVPKMLAAQFALELRLLLRNGEQLL Mvan_2729|M.vanbaalenii_PYR-1 MT------TENRFTPGTFTPDPRPAPVPRMLAAQFRLELRLLLRNGEQLL MSMEG_3118|M.smegmatis_MC2_155 MTSP----AANRFAPGTFTPDPRPATVQKMLAAQFGLELRLLLRNGEQLL TH_0342|M.thermoresistible__bu --------VTNRFPAGTFTPDPRPAPVPRMLAAQYGLELKLLLRNGEQLL MUL_1858|M.ulcerans_Agy99 MTQTN---GEGTFPVGTFTPDPRPSAVPRMLAAQFGLELKLLLRNGEQLL MMAR_2262|M.marinum_M MTQTN---GEGTFPVGTFTPDPRPSAVPRMLAAQFGLELKLLLRNGEQLL MAV_3322|M.avium_104 MTDS------GVFPVGTFTPNPRPSAVPKMLAAQYGLELKLLLRNGEQLL Mb1492c|M.bovis_AF2122/97 MTQTN----RPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLL Rv1457c|M.tuberculosis_H37Rv MTQTN----RPAFPAGTFSPDPRPNAVPLMLAAQFSLELKLLLRNGEQLL MLBr_00589|M.leprae_Br4923 MTQNNTLRNSPLFPAGTFTPNPRPNAVTRMVAAQFMLELKLLLRNGEQLL MAB_2753|M.abscessus_ATCC_1997 MTDTT----TPRFDPGTFTPDPRPSAVHTMLFAQFWLELKLLLRNGEQLL * ***:*:*** * *: **: ***:********** Mflv_3681|M.gilvum_PYR-GCK LTMFIPITLLIGLILLPLGSFGPNRAATFVPAIMALAVISTAFTGQAIAV Mvan_2729|M.vanbaalenii_PYR-1 LTMFIPITLLVGLTLLPLGSFGDNRAATFVPAIMALAVISTAFTGQAIAV MSMEG_3118|M.smegmatis_MC2_155 LTMFIPITLLIGLTLLPLGSFGDDRAGAFTPAIMALAVISTAFTGQAIAV TH_0342|M.thermoresistible__bu LTLFIPITLLVGLILLPLGDFGDDRASRFVPAIMALAVISTAFTGQAIAV MUL_1858|M.ulcerans_Agy99 LTMFIPITLLIGLTLLPLGSFGQHRAATFVPVIMALAVISTAFTGQAIAV MMAR_2262|M.marinum_M LTMFIPITLLIGLTLLPLGSFGQHRAATFVPVIMALAVISTAFTGQAIAV MAV_3322|M.avium_104 LTMFIPITLLVGLTLLPLGSFGQHRAATFTPVIMALAVISTAFTGQAIAV Mb1492c|M.bovis_AF2122/97 LTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAV Rv1457c|M.tuberculosis_H37Rv LTMFIPITLLVGLTLLPMGSFGHNRAATFVPVIMALAVISTAFTGQAIAV MLBr_00589|M.leprae_Br4923 LTMFIPITLLIGLTLLPLGSFGHHRATTFVPVIMALAVVSSAFTGQAIAV MAB_2753|M.abscessus_ATCC_1997 LTMFIPITLLIGLTLLPLGQFPGSRTDIFVPAIMALAVISTAFTGQAIAV **:*******:** ***:*.* *: *.*.******:*:********* Mflv_3681|M.gilvum_PYR-GCK AFDRRYGALKRLGATALPVWGVIAGKSLAVVTVVSLQSVLFGAIGFALGW Mvan_2729|M.vanbaalenii_PYR-1 AFDRRYGALKRLGATALPVWGIIAGKSLAVGAVVILQSILFGAIGFALGW MSMEG_3118|M.smegmatis_MC2_155 AFDRRYGALKRLGATALPVWGIIAGKSLAVVAVVFLQAVLLGAIGVALGW TH_0342|M.thermoresistible__bu AFDRRYGALKRLGATALPVWGIIVGKSLAVVTVVFVQSVVLGAIGAALGW MUL_1858|M.ulcerans_Agy99 AFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIVLGAIGFALGW MMAR_2262|M.marinum_M AFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIVLGAIGFALGW MAV_3322|M.avium_104 AFDRRYGALKRLGATPLPVWGIIAGKSLAVVTVVFLQAILLGAIGFALGW Mb1492c|M.bovis_AF2122/97 AFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGFALGW Rv1457c|M.tuberculosis_H37Rv AFDRRYGALKRLGATPLPVWGIIAGKSLAVVAVVFLQAIILGAIGFALGW MLBr_00589|M.leprae_Br4923 AFDRRYGALKRFGATPLPVWGIIAGKSLAVVTVVFLQAIILGAIGVMLGW MAB_2753|M.abscessus_ATCC_1997 GFDRRYGALKRLGATALPVWGIIAGKALAVVTVVVLQAAVIGAIGGALGW .**********:***.*****:*.**:*** :** :*: ::**** *** Mflv_3681|M.gilvum_PYR-GCK RPPLAGLALGALIIALGTAVFAALGLLLGGTLRAEIVLALANLLWFVFAG Mvan_2729|M.vanbaalenii_PYR-1 RPPLAGLALGAVIIALGTAVFAALGLLLGGTLRAEIVLALANLLWFVFAG MSMEG_3118|M.smegmatis_MC2_155 RPPLAGLALGAVIIALGTAGFAAMGLLLGGTLRSEIVLALANLLWFVFAG TH_0342|M.thermoresistible__bu RPQPAGLLLGAVIIALGTAVFAALGLLLGGTLRAEIVLAVANLLWFVFAA MUL_1858|M.ulcerans_Agy99 RPALAALALGGAVIALGTAGFAALGLLLGGTLRAEIVLAIANLMWFVFAG MMAR_2262|M.marinum_M RPALAALALGGAVIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAG MAV_3322|M.avium_104 RPALAALALGAAVIALGTAVFAALGLLLGGTLRAEIVLALANLMWFVFAG Mb1492c|M.bovis_AF2122/97 RPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAG Rv1457c|M.tuberculosis_H37Rv RPALTALTLGAGIIALGTAGFAALGLLLGGTLRAEIVLAVANLMWFVFAG MLBr_00589|M.leprae_Br4923 RPALICLALGAAIIALGTAGLAALGLLLGGTLRAEIVLAVANLMWFVFAG MAB_2753|M.abscessus_ATCC_1997 RPHPVGLLVGAVVIAIGTAAFVAMGLLLGGTLRAEIVLALANLLWFIFAG ** * :*. :**:*** :.*:*********:*****:***:**:**. Mflv_3681|M.gilvum_PYR-GCK LGALVLERG----MVPAAVQWVARLTPSGALTEALVQAMTLSVDWFGLLV Mvan_2729|M.vanbaalenii_PYR-1 LGALTLEAG----VVPSTVQWVARLTPSGALTEALTQAMTSSMDWFGLAV MSMEG_3118|M.smegmatis_MC2_155 FGALTLETE----AVPSALAWVARLTPSGALTEALSQAMTLSVDWFGIAV TH_0342|M.thermoresistible__bu FGALTVEPEG--DVVPAAAALVARLTPSGALTDALSQAMTLSVNWFAVAV MUL_1858|M.ulcerans_Agy99 FGALTVETD----VIPTAVKWAARLTPSGALTEALSRAMVLSVDWFGVVV MMAR_2262|M.marinum_M FGALTVETD----VIPTAVKWAARLTPSGALTEALSRAMVLSVDWFGVVV MAV_3322|M.avium_104 LGALTVDSG----VIPAGVKWAARLTPSGALTEALSRAMTLSADWFGMAV Mb1492c|M.bovis_AF2122/97 FGALTLESN----VIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVV Rv1457c|M.tuberculosis_H37Rv FGALTLESN----VIPTAFKWVARVTPSGALTEALSQAMTVSVDWFGIVV MLBr_00589|M.leprae_Br4923 LGALTVKMN----MISAVVKWAARLTPSGALTEALSQAMTLSVDWFGVII MAB_2753|M.abscessus_ATCC_1997 LGALTLEDGRTTDAIPRAVVLLARLSPSGALSEALAAAMTLSVDWFAIAV :***.:. :. **::*****::** **. * :**.: : Mflv_3681|M.gilvum_PYR-GCK LAAWGAVAALCALRWFRFV Mvan_2729|M.vanbaalenii_PYR-1 LAVWGAVAGLCALRWFRFT MSMEG_3118|M.smegmatis_MC2_155 LAVWGGVSAVCALRLFRFT TH_0342|M.thermoresistible__bu LAVWGVLGAVCALRWFRFT MUL_1858|M.ulcerans_Agy99 LAVWGTLAALAARRWFRFT MMAR_2262|M.marinum_M LAVWGTLAALAARRWFRFT MAV_3322|M.avium_104 LVAWGALGALGALRWFRFT Mb1492c|M.bovis_AF2122/97 LAVWGALAALAALRWFRFT Rv1457c|M.tuberculosis_H37Rv LAVWGALAALAALRWFRFT MLBr_00589|M.leprae_Br4923 LTAWGTLAALAALHWFRFT MAB_2753|M.abscessus_ATCC_1997 LAVWGALAGYGALRWFKFT *..** :.. * : *:*.