For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRVGKVEAGTISDWHPEPGTLVSWQPSRGSLAKAAKAPISPVPPSYMQAHHLRNFRSYRERGLEMSRLLI SSWDIPGICDIRTMTHVVNAHMRRHDTFRSWFEHTEGDHFVRRTLERPNDIQFVAVEHGELTTQSQWRER LLATPSPLEWGCVRFSIIQRADHFTFCVAIDHLHCDAMFVGVVFAEIHLMYLALVSGGAPLRLAEPGSYD NYCNRQREHISGLTLDSPVMSKWTEFFDNNDGSLPKFPLPLGDTSAQCEMMGVRLMDERQTLALEAACMS AGARFCGGVFAISAVVQHELTGADEYYAIVPIDIRRTEEDFMTTGWFTGFVPITVPTVGSSFGEIVKAAQ GSFDSGRDLAEVPLDCVMELVLWLREGQWGAPLLFYLDAGIPPLSAMANSHVEGLRARLCHDGGMMGQID IRVNRLEKETQLTVLFPNNPVARESVTRYVEALKSAFVRVAEGRDVMPAPSRTGSQLHLAYSRRTYEPPA TVSPLTSWRTG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1531 | papA3 | - | 100% (502) | polyketide synthase associated protein PapA3 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1214 | papA3 | 1e-135 | 50.75% (465) | polyketide synthase associated protein PapA3 |
M. gilvum PYR-GCK | Mflv_0404 | - | 1e-119 | 45.92% (466) | condensation domain-containing protein |
M. tuberculosis H37Rv | Rv1182 | papA3 | 1e-135 | 50.75% (465) | polyketide synthase associated protein PapA3 |
M. leprae Br4923 | MLBr_01230 | papA3 | 1e-134 | 49.78% (464) | PKS-associated protein, unknown function |
M. abscessus ATCC 19977 | MAB_3147c | - | 1e-122 | 47.25% (472) | polyketide synthase associated protein |
M. marinum M | MMAR_2355 | papA3 | 0.0 | 99.40% (502) | polyketide synthase associated protein PapA3 |
M. avium 104 | MAV_1762 | - | 1e-122 | 45.49% (466) | condensation domain-containing protein |
M. smegmatis MC2 155 | MSMEG_4728 | - | 1e-134 | 51.49% (470) | condensation domain-containing protein |
M. thermoresistible (build 8) | TH_2204 | papA1 | 1e-153 | 55.14% (477) | PROBABLE CONSERVED POLYKETIDE SYNTHASE ASSOCIATED PROTEIN |
M. vanbaalenii PYR-1 | Mvan_0270 | - | 1e-114 | 44.85% (466) | condensation domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MUL_1531|M.ulcerans_Agy99 MVRVGKVEAGTISDWHPEPGTLVSWQPSRGSLAKAAKAPISPVPPSYMQA MMAR_2355|M.marinum_M MVRVGKVEAGTISDWHPEPGTLVSWQPSRGSLAKAAKAPISPVPPSYMQA MSMEG_4728|M.smegmatis_MC2_155 MFELT-----DIQNWDDAPGKHVSWGPSPSTVAKVAEAPVSDVPASYQQA TH_2204|M.thermoresistible__bu MVALGNVAVETVREWRPDPGRVVSWDPSPAALEKARQAPVSSVPVSYMQA Mb1214|M.bovis_AF2122/97 MLRVGPLTIGTLDDWAPSTGSTVSWRPSAVAHTKASQAPISDVPVSYMQA Rv1182|M.tuberculosis_H37Rv MLRVGPLTIGTLDDWAPSTGSTVSWRPSAVAHTKASQAPISDVPVSYMQA MLBr_01230|M.leprae_Br4923 -MQVGPLTLGTLLDWAPRAGKTISWQPTPATCEKVSQAPVSSVPVAYMQA Mflv_0404|M.gilvum_PYR-GCK -MRIGKITVGALEEWSLSPGKVISWHPTAASIEKARQAPVSSVPVSYMQG Mvan_0270|M.vanbaalenii_PYR-1 -MRIGKITVGALDEWSLNPGSVTSWHPTAAAVETARRAQVSSVPVSYMQG MAV_1762|M.avium_104 -MRIGKITIGSLGDWTPTPGPVTSWHPTAAAAEKVRQAPASPVPVSYMQG MAB_3147c|M.abscessus_ATCC_199 -MRGGPVTVSLTDKWEPTAGSVITWQPSPASYAKALEAPVSDVPPSFMQV . .* .* :* *: : .. .* * ** :: * MUL_1531|M.ulcerans_Agy99 HHLRNFRSYRERGLEMSRLLISSWDIPGICDIRTMTHVVNAHMRRHDTFR MMAR_2355|M.marinum_M HHLRNFRSYRERGLEMSRLLISSWDIPGICDIRTMTHVVNAHMRRHDTFR MSMEG_4728|M.smegmatis_MC2_155 QHLRAYREHTARGVPMARLTVPVWNMDSQCDMRAMSHVINAYLRRHDTYH TH_2204|M.thermoresistible__bu QHLRGFVEHAARGQEMSRLCIAAFDIPGRCDLRAMTYVINAHMRRHDTYR Mb1214|M.bovis_AF2122/97 QHIRGYCEQKAKGLDYSRLMVVSCQQPGQCDIRAANYVINAHLRRHDTYR Rv1182|M.tuberculosis_H37Rv QHIRGYCEQKAKGLDYSRLMVVSCQQPGQCDIRAANYVINAHLRRHDTYR MLBr_01230|M.leprae_Br4923 QHIRGYVEQKAKGLDYSRLMIVSCDQLGQCDIRAINYIVNAHLRRHDTYR Mflv_0404|M.gilvum_PYR-GCK QHLRNYCDRTTEGLNFSRQIIASCDVAGVCDIEAMDHAVNAYLRRHDTFR Mvan_0270|M.vanbaalenii_PYR-1 QHLRNYWERTTAGLNFSRQIIASCEVPGQCDIAAMDHAVNAYLRRHDTFR MAV_1762|M.avium_104 QHLRNYHERTAAGLDFSRQIIATCDVPGRCDISAMNYAVNAYLRRHDTFR MAB_3147c|M.abscessus_ATCC_199 QHLRTYLRQAAKGLDFSRVLVFTLDMPGRCDKRAMGHVINAHLRRHDTYR :*:* : * :* : : . ** : : :**::*****:: MUL_1531|M.ulcerans_Agy99 SWFEHTEGDHFVRRTLERPNDIQFVAVEHGELTTQSQWRERLLATPSPLE MMAR_2355|M.marinum_M SWFEHTEGDHFVRRTLERPNDIQFVAVEHGELTTQSQWREHLLATPSPLE MSMEG_4728|M.smegmatis_MC2_155 SRFEFTVDDRIVRRKLRSPRDLRFVPTDHGVQTCD-QWREHILDTPGPLQ TH_2204|M.thermoresistible__bu SWFEYHDFHHIVRHTITDPADIELVPTRHGAMTPE-QWQQHLLSTPDPLQ Mb1214|M.bovis_AF2122/97 SWFQYNGNGQIIRRTIQDPADIEFVPVHHGELTLPQIREIVQ-NTPDPLQ Rv1182|M.tuberculosis_H37Rv SWFQYNGNGQIIRRTIQDPADIEFVPVHHGELTLPQIREIVQ-NTPDPLQ MLBr_01230|M.leprae_Br4923 SWFEYTDEGEIIRHTLCDPADIEFVPIEHGQLSLAQIRELAV-STPDPLE Mflv_0404|M.gilvum_PYR-GCK SWFEHSGDGEFVRRALVDPEDIEFVPVEHGHMGVDEIHAHVV-AIPSPLE Mvan_0270|M.vanbaalenii_PYR-1 SWFERTEEGEFLRRAIADPADIEFVPIEHGDMTVDEIFAHVV-DIPSPLE MAV_1762|M.avium_104 SWFHHSGDGEFVRHTVSNPADIEFAPIHHGEMTAEEIRAHVV-AIPNPLE MAB_3147c|M.abscessus_ATCC_199 SWFSLDDEQNIVRRTMADPADVEFVQVKLGEMTSDEVRELVVSETPDPFR * * .::*: : * *:.:. * *.*:. MUL_1531|M.ulcerans_Agy99 WGCVRFSIIQRADHFTFCVAIDHLHCDAMFVGVVFAEIHLMYLALVSGGA MMAR_2355|M.marinum_M WGCVRFSIIQRADHFTFCVAIDHLHCDAMFVGVVFAEIHLMYLALVSGGA MSMEG_4728|M.smegmatis_MC2_155 WDCFRFGIIQRTDHFTCYMSVDHVHVDATFLGLMLIEIHLMYAALVSGGA TH_2204|M.thermoresistible__bu WNCFRFSIIQRSDHFTFCVCMDHVHIDAMFMGAVFMEIHMQYAALVGGGA Mb1214|M.bovis_AF2122/97 WGCFRFGIVQGCDHFTFFASVDHVHVDAMIVGVTLMEFHLMYAALVGGHA Rv1182|M.tuberculosis_H37Rv WGCFRFGIVQGCDHFTFFASVDHVHVDAMIVGVTLMEFHLMYAALVGGHA MLBr_01230|M.leprae_Br4923 WGCFQFGVIQAEEHFTFYASIDHVHVDAMIVGVTLMEFHMMYSALVSGAG Mflv_0404|M.gilvum_PYR-GCK WGCFTFGVIQNDDHFSFFASMDHVHGDATLIGTTMMEANGMYSALSSGGA Mvan_0270|M.vanbaalenii_PYR-1 WGCFTFGVIQHDGHFTFFASMDHVHGDATLIGTTMMEANGMYSALSGGGA MAV_1762|M.avium_104 WGCFTFGVVQNEEYFTFFAAMDHVHGDATLIGTTMLEANGMYAAASAGSE MAB_3147c|M.abscessus_ATCC_199 WDCFRFGIVQSSGHFTFYFSVDHLHLDATFARLLIMEILMGYKALVQGGA *.*. *.::* :*: .:**:* ** : : * * * * MUL_1531|M.ulcerans_Agy99 PLRLAEPGSYDNYCNRQREHISGLTLDSPVMSKWTEFFDNNDGSLPKFPL MMAR_2355|M.marinum_M PLRLAEPGSYDNYCNRQREHISGLTLDSPVMSKWTEFFDNNDGSLPKFPL MSMEG_4728|M.smegmatis_MC2_155 PITLPPAGSYDDYCVRQRKYTSGLTLDSPEIKEWVTFLEGNNGTMPKFPL TH_2204|M.thermoresistible__bu PIPLQ-AGSYDDFCVRQRQYTESLTADSPEVRAWVDFAGQMGGTLPNFPL Mb1214|M.bovis_AF2122/97 PLELPPAGSYDDFCRRQHTFSSTLTVESPQVRAWTKFAEGTNGSFPDFPL Rv1182|M.tuberculosis_H37Rv PLELPPAGSYDDFCRRQHTFSSTLTVESPQVRAWTKFAEGTNGSFPDFPL MLBr_01230|M.leprae_Br4923 PLELPEAGSYDDFCRRQHRFTSMLTAESPQIRSWTQFAEPNEGSFPDFPL Mflv_0404|M.gilvum_PYR-GCK ALALPDAGSFDDFCVREREYTAELTEDSPGVRAWIEFAENNSDGFPEFPL Mvan_0270|M.vanbaalenii_PYR-1 ALTLPDAGSFDEFCVRERAHTSELTEDSPEVRAWIEFAENSGGGFPEFPL MAV_1762|M.avium_104 PLELPDAGSFDDFCAREREYTSALTVDSPEVRAWIDFAENNNGSFPEFPL MAB_3147c|M.abscessus_ATCC_199 PIELPPAGSYGDYCIRQHEFLSGLTPDSEPVREWTQFAENNRGSLPDFPL .: * .**:.::* *:: . ** :* : * * . :*.*** MUL_1531|M.ulcerans_Agy99 PLGDTSAQC--EMMGVRLMDERQTLALEAACMSAGARFCGGVFAISAVVQ MMAR_2355|M.marinum_M PLGDTSAQC--EMMGVRLMDERQTLAFEAACMSAGARFCGGVFAISAVVQ MSMEG_4728|M.smegmatis_MC2_155 PLGDLSVPCTGDLMTVQLLDEPQTQGFEKACVAAGSRFIGGVFAAAALAQ TH_2204|M.thermoresistible__bu PLGDRTKPWPGELMVVKLLDGRQTDRFEAACVSAGARFVGGVFACAALTE Mb1214|M.bovis_AF2122/97 PLGDPSKPSDADIVTVMMLDEEQTAQFESVCTAAGARFIGGVLACCGLAE Rv1182|M.tuberculosis_H37Rv PLGDPSKPSDADIVTVMMLDEEQTAQFESVCTAAGARFIGGVLACCGLAE MLBr_01230|M.leprae_Br4923 PLGDPLEPTQADIVTITMLDEQQTDRFEAACTVAGARFVGGVLACCGLAE Mflv_0404|M.gilvum_PYR-GCK PLGNPKDSTRSVMTSAVLMDTAQTERFDAAATAAGARFVGGLFACLAQVE Mvan_0270|M.vanbaalenii_PYR-1 PLGNPAESTRSCMTSEILMDTAQTERFESACTAAGARFVGGLFACLAQVE MAV_1762|M.avium_104 PLGNPSEATASAMVSELVMDAEQTERFESACTAVGVRFIGGLFACIALVE MAB_3147c|M.abscessus_ATCC_199 PLGDHGVQCGTAIVTEQLLDEQQALKFESLCVDAGARFIGGVMAALGFAE ***: : ::* *: :: . .* ** **::* . .: MUL_1531|M.ulcerans_Agy99 HELTGADEYYAIVPIDIRRTEEDFMTTGWFTGFVPITVPTVGSSFGEIVK MMAR_2355|M.marinum_M HELTGADEYYAIVPIDIRRTEEDFMTTGWFTGFVPITVPTVGSSFGEIVK MSMEG_4728|M.smegmatis_MC2_155 YQLTDIDTYHVITPTTTRGTEAEVMATGWFTGTVPITVPVG-SSFAETAR TH_2204|M.thermoresistible__bu NELAGVETFHAITPTDTRSTPADFMTTGWFTGMVPITVPAAGVSFGEAAR Mb1214|M.bovis_AF2122/97 HELTGTTTYYGLTPRDTRRTPADAMTQGWFTGLIPITVPIAGSAFGDAAR Rv1182|M.tuberculosis_H37Rv HELTGTTTYYGLTPRDTRRTPADAMTQGWFTGLIPITVPIAGSAFGDAAR MLBr_01230|M.leprae_Br4923 YELTGADTYYGLTPRDTRRIPTDVLTQGWFTGLVPITVPIAGSSFGDAAR Mflv_0404|M.gilvum_PYR-GCK HELTGALTYYGLTPRDSRSGSDNFMTQGWFTGLIPITVPIGAASFGEAAW Mvan_0270|M.vanbaalenii_PYR-1 HELTGALTYYGLTPRDSRSASDNFMTQGWFTGLIPITVPIGATSFADAAW MAV_1762|M.avium_104 HELTGALTYYGLTPRDTRRTTDNFMTQGWFTGLVPITVPIAAASFADAAW MAB_3147c|M.abscessus_ATCC_199 RELTGTDTYYGITPSDAR-EEADMFTTGWFTGLVPITAPVDG-TFAAAAV :*:. :: :.* * : :: ***** :***.* :*. . MUL_1531|M.ulcerans_Agy99 AAQGSFDSGRDLAEVPLDCVMELVL---WLREGQWGAPLLFYLDAGIPPL MMAR_2355|M.marinum_M AAQGSFDSGRDLAEVPLDCVMELVP---WLREGQWGAPLLFYLDAGIPPL MSMEG_4728|M.smegmatis_MC2_155 TAQRSFDSGLYLAHVPFDRVLELGATERGLRAPDPGVPMVSYLDATAAPL TH_2204|M.thermoresistible__bu AAQQSFDSGIGLGHVPYDRVLELVP---SLRRAETCSPMMSFLDAGVPPL Mb1214|M.bovis_AF2122/97 AAQTSFDSGVKLAEVPYDRVVELSS---TLTMPRPNFPVVNFLDAGAAPL Rv1182|M.tuberculosis_H37Rv AAQTSFDSGVKLAEVPYDRVVELSS---TLTMPRPNFPVVNFLDAGAAPL MLBr_01230|M.leprae_Br4923 AAQNCFDTDVHLAEVPYDRVVELAP---TVHKPRPNFPVINFLDAGTAPL Mflv_0404|M.gilvum_PYR-GCK AAQSSFDSGLNMAKVPYYRVLELAP---WLGWPRPNFPVSNFFHGGAAPL Mvan_0270|M.vanbaalenii_PYR-1 AAQASFDSNLFMAKVPYYRVLELAP---WLSWPRPNFPVSNFFHGGAAPL MAV_1762|M.avium_104 TAQTSFDSGQQLAKVPYYRVLELAP---WLKWPQPNFPVSNFFHAGAAPL MAB_3147c|M.abscessus_ATCC_199 AAQESFDRGRQLVNVPFYRVLELVP---QLSWPRPYHPMINFFDGGAPPL :** .** . : .** *:** : *: ::.. .** MUL_1531|M.ulcerans_Agy99 SAMANSHVEG--LRARLCHDGGMMGQIDIRVNRLEKETQLTVLFPNNPVA MMAR_2355|M.marinum_M SAMANSHVEG--LRARLCHDGGMMGQIDIRVNRLEKETQLTVLFPNNPVA MSMEG_4728|M.smegmatis_MC2_155 SPAVVAEWNR--INGRIFSEMGAANQVGMWVNQFGSGTWITVAFPNNPVA TH_2204|M.thermoresistible__bu SALVASQLDG--LNARVYGDGKVPAQLCMWVNRMDNETSVTVFFPDNPVA Mb1214|M.bovis_AF2122/97 SVLLTAELTG--TNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIA Rv1182|M.tuberculosis_H37Rv SVLLTAELTG--TNIGVYSDGRYSYQLSIYVIRVEQGTAVAVMFPDNPIA MLBr_01230|M.leprae_Br4923 SVLLTAGLDG--LNIGVYSDGRYSYQMSIYVIRVEQETAVAVMFPDNPEA Mflv_0404|M.gilvum_PYR-GCK NAILAASEMGLADNIGIYPDGRFSYQLTIYIFRYGQGTEMAIMHPDNPVA Mvan_0270|M.vanbaalenii_PYR-1 NAILAAADMGLANNIGIYPDGRFSYQLTIYIFRYGEGTVMAIMHPDNPVA MAV_1762|M.avium_104 NAVLAAADLGYANNIGIYSDGRYSYQLTIYVFRYGEGTAMAMMYPDNPVA MAB_3147c|M.abscessus_ATCC_199 SQLFTNPLLVS-NPIGLYAESKSVYQLTIFISRFPTETTLMIAYPDNPVA . : : *: : : : * : : .*:** * MUL_1531|M.ulcerans_Agy99 RESVTRYVEALKSAFVRVAEGRDVMPAPSRTGSQLHLAYSRRTYEPPATV MMAR_2355|M.marinum_M RESVTRYVEALKSAFVRVAEGRDVMPAPSRTGSQLHLAYSRRTYEPPATV MSMEG_4728|M.smegmatis_MC2_155 RASVQEYVDAFRSVCVAVAEGRHDDVPTPRVN-ELDLRSA---------- TH_2204|M.thermoresistible__bu RASVEKYVATLRSIYVAVAEGRADRLGARRSG-ELQRQPA---------- Mb1214|M.bovis_AF2122/97 RESVARYLATLKSVFQRVAESGQQQNVA---------------------- Rv1182|M.tuberculosis_H37Rv RESVARYLATLKSVFQRVAESGQQQNVA---------------------- MLBr_01230|M.leprae_Br4923 QESVARYLETLKSVFECVAESGHWRNVA---------------------- Mflv_0404|M.gilvum_PYR-GCK KRSVERYMQTMSSVASLVADTGHWGRVA---------------------- Mvan_0270|M.vanbaalenii_PYR-1 KKSVTRYMKVMKSVAGLVADSGTWGLVA---------------------- MAV_1762|M.avium_104 HKSVARYTETMRSVCGRVADTGHWGRVA---------------------- MAB_3147c|M.abscessus_ATCC_199 RESITRYVDLVKSTFARVCEQNDVVPAR---------------------- : *: .* . * *.: MUL_1531|M.ulcerans_Agy99 SPLTSWRTG MMAR_2355|M.marinum_M SPLTSWRTG MSMEG_4728|M.smegmatis_MC2_155 --------- TH_2204|M.thermoresistible__bu --------- Mb1214|M.bovis_AF2122/97 --------- Rv1182|M.tuberculosis_H37Rv --------- MLBr_01230|M.leprae_Br4923 --------- Mflv_0404|M.gilvum_PYR-GCK --------- Mvan_0270|M.vanbaalenii_PYR-1 --------- MAV_1762|M.avium_104 --------- MAB_3147c|M.abscessus_ATCC_199 ---------