For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
EWFSASEYWLGRLVLERGVAAVYLTAFVASALQFRALIGEHGMLPVPRYLAHRSFWRTPSVFHFRYSDRL CAGVCWLDAALSAAVVGGTADLVPLWGGMLMWLTLWVLYLSIVNVGQVWYGFGWESLLLETGFLVVFLGN DRVAPPLVMLWLVRWLLFRVEFGAGLIKMRGDACWRNLTCLYYHHETQPMPGPLSWFVHRMPRPLHRIEV AGNHFAQLVVPFGLFAPQPIASIAAVIIIVTQLWLVMSGNFSWLNWLTILLACSAIEQSAARKVLPIPVR AALPPPPTWFAALVLIFAATVLVLSYWPARNMLSPPPRQRMNMSFNPVHLVNTYGAFGSICRTRREVVVE GTSEAELNAQTVWQEYEFKGKPGRVGRLPRQWAPYHLRLDWLMWFAAISPGYALPWMTPLLTRLLRNDRA TLRLLRRNPFPDTPPRYVRAQLYQYPFTTLQELRRHHAWWHRTLIGKYAAPMSLD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1156 | - | - | 100% (476) | hypothetical protein MUL_1156 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0240c | - | 0.0 | 79.37% (475) | transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0235c | - | 0.0 | 79.37% (475) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0493 | - | 0.0 | 97.69% (476) | hypothetical protein MMAR_0493 |
M. avium 104 | MAV_4924 | - | 0.0 | 73.64% (478) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_1761 | - | 0.0 | 66.82% (431) | integral membrane protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4797 | - | 0.0 | 70.04% (474) | hypothetical protein Mvan_4797 |
CLUSTAL 2.0.9 multiple sequence alignment MUL_1156|M.ulcerans_Agy99 --MEWFSASEYWLGRLVLERGVAAVYLTAFVASALQFRALIGEHGMLPVP MMAR_0493|M.marinum_M --MEWFSASEYWLGRLVLERGVAAVYLTAFVASALQFRALIGEHGMLPVP Mb0240c|M.bovis_AF2122/97 --MGWFSAPEYWLGRLALERGTAIIYLIAFVAAAQQFRPLIGEHGMLPVP Rv0235c|M.tuberculosis_H37Rv --MGWFSAPEYWLGRLALERGTAIIYLIAFVAAAQQFRPLIGEHGMLPVP MAV_4924|M.avium_104 --MSWFSAPDYWVGRLVLERGVAVIYLLAFVAAAAQFRALIGEHGMLPIP Mvan_4797|M.vanbaalenii_PYR-1 MYADWFDAPGYWLAREVLQRGVAAIYLIAFVAAARQFRALIGEHGMLPVP MSMEG_1761|M.smegmatis_MC2_155 ----------------------------------------------MPIP :*:* MUL_1156|M.ulcerans_Agy99 RYLAHRSFWRTPSVFHFRYSDRLCAGVCWLDAALSAAVVGGTADLVPLWG MMAR_0493|M.marinum_M RYLAHRSFWRTPSVFHFRYSDRLFAGVCWLGAALSAAVVGGTADLVPLWG Mb0240c|M.bovis_AF2122/97 RYLAGQSFWRTPSIFHFRYSDRVFAGVCWLGAVLSAAVVAGAASFVPLWA Rv0235c|M.tuberculosis_H37Rv RYLAGQSFWRTPSIFHFRYSDRVFAGVCWLGAVLSAAVVAGAASFVPLWA MAV_4924|M.avium_104 RFLAGQSWRRTPSIFHLHYSDRLFAALSWFGAALSAAIVAGAADAVPLWA Mvan_4797|M.vanbaalenii_PYR-1 RFVAQVPFRVAPSVFHLHYSDRFFSAVCWSGAVLATAVAAGGDDLVPLWA MSMEG_1761|M.smegmatis_MC2_155 RFLARSSFRNSPSIFHLHYSDRFFAAVCWTGAAVAAAMVLGAGDRLPLWA *::* .: :**:**::****. :.:.* .*.:::*:. * . :***. MUL_1156|M.ulcerans_Agy99 GMLMWLTLWVLYLSIVNVGQVWYGFGWESLLLETGFLVVFLGNDRVAPPL MMAR_0493|M.marinum_M AMLMWLTLWVLYLSIVNVGQVWYGFGWESLLLETGFLMVFLGNDRVAPPL Mb0240c|M.bovis_AF2122/97 TMLIWLTLWVLYLSIVNVGQAWYSFGWESLLLETGFLMIFLGNERTAPPI Rv0235c|M.tuberculosis_H37Rv TMLIWLTLWVLYLSIVNVGQAWYSFGWESLLLETGFLMIFLGNERTAPPI MAV_4924|M.avium_104 AMLMWLTLWVLYLSIVNVGQTWYSFGWESLLLETGFLMIFLGNAEVAPPL Mvan_4797|M.vanbaalenii_PYR-1 ATLAWLALWVLYLSIVNVGQRWYGFGWESLLLEAGFLAMLLGNDDTAPPL MSMEG_1761|M.smegmatis_MC2_155 AMLVWVLLWVLYLSIVNVGQAWYSFGWESLLLEAGTLAVFLGNDDVAPPL * *: ************* **.*********:* * ::*** .***: MUL_1156|M.ulcerans_Agy99 VMLWLVRWLLFRVEFGAGLIKMRGDACWRNLTCLYYHHETQPMPGPLSWF MMAR_0493|M.marinum_M VMLWLVRWLLFRVEFGAGLIKMRGDACWRNLTCLYYHHETQPMPGPLSWF Mb0240c|M.bovis_AF2122/97 LTLLLARWLLFRVEFGAGLIKMRGDSCWRSLTCLYYHHETQPMPGPLSWF Rv0235c|M.tuberculosis_H37Rv LTLLLARWLLFRVEFGAGLIKMRGDSCWRSLTCLYYHHETQPMPGPLSWF MAV_4924|M.avium_104 LTLWMARLLLFRVEFGAGLIKMRGDPCWRDLTCLYYHHETQPMPGPLSWF Mvan_4797|M.vanbaalenii_PYR-1 LALWLARWLLFRVEFGAGLIKMRGDPCWRDLSCLDYHHETQPMPGPLSWF MSMEG_1761|M.smegmatis_MC2_155 LVLWLVRWLLFRVEFGAGMIKMRGDRCWRDLTCLYYHHETQPMPGPLSWF : * :.* **********:****** ***.*:** *************** MUL_1156|M.ulcerans_Agy99 VHRMPRPLHRIEVAGNHFAQLVVPFGLFAPQPIASIAAVIIIVTQLWLVM MMAR_0493|M.marinum_M FHRMPRPLHRIEVAGNHFAQLVVPFGLFAPQPIASIAAVIIIVTQLWLVM Mb0240c|M.bovis_AF2122/97 FHHLPKPLHRIEVAGNHFAQLVVPFGLFTPQPAASIAAAIIVVTQLWLVA Rv0235c|M.tuberculosis_H37Rv FHHLPKPLHRIEVAGNHFAQLVVPFGLFTPQPAASIAAAIIVVTQLWLVA MAV_4924|M.avium_104 FHHLPKPLHRIEVAGNHFAQLIVPFGLFAPQPVAGVAAAIIVVTQLWLVA Mvan_4797|M.vanbaalenii_PYR-1 FHHLPKPLHRVEVAGNHVAQLVVPFALFAPQPVASVAAGIVIVTQLWLVL MSMEG_1761|M.smegmatis_MC2_155 FHHLPKPLHRVEVAGNHVAQLVIPFLLFAPQPVASTAAAVVIVTQLWLVA .*::*:****:******.***::** **:*** *. ** :::******* MUL_1156|M.ulcerans_Agy99 SGNFSWLNWLTILLACSAIEQSAARKVLP---IPVRAALPPPPTWFAALV MMAR_0493|M.marinum_M SGNFSWLNWLTILLACSAIEQSAARKVLP---IPVRAALPPPPTWFAALV Mb0240c|M.bovis_AF2122/97 SGNFSWLNWLTILLACSAIDTSSAAALLP---MPAQPALSAPPQWFAGLV Rv0235c|M.tuberculosis_H37Rv SGNFSWLNWLTILLACSAIDTSSAAALLP---MPAQPALSAPPQWFAGLV MAV_4924|M.avium_104 SGNFAWLNWVTILLACSAIDDSSVALLLPKSVLPGQGEPSASPLWFVVVV Mvan_4797|M.vanbaalenii_PYR-1 SGNFAWLNWLTILLAFSAVDQSVFAVVLP---MSAPPARAGPPPWFAALV MSMEG_1761|M.smegmatis_MC2_155 SGNFAWLNWITIVLACGVVSDTALSAVVG---VSAAPDVGDPPVWYVAAV ****:****:**:** ..:. : :: :. .* *:. * MUL_1156|M.ulcerans_Agy99 LIFAATVLVLSYWPARNMLSPPPRQRMNMSFNPVHLVNTYGAFGSICRTR MMAR_0493|M.marinum_M LIFAATVLVLSYWPARNMLS--PRQRMNMSFNPLHLVNTYGAFGSICRTR Mb0240c|M.bovis_AF2122/97 VVFTAAVLLLSYWPARNLLS--SHQRMNMSFNPFHLVNTYGAFGSICRTR Rv0235c|M.tuberculosis_H37Rv VVFTAAVLLLSYWPARNLLS--SHQRMNMSFNPFHLVNTYGAFGSICRTR MAV_4924|M.avium_104 VAVTAAVLVMSYWPIRNMLS--SRQRMNMSFNSFHLVNTYGAFGSIGRVR Mvan_4797|M.vanbaalenii_PYR-1 IAGTALTVVLSYWPVRNMLG--RRQQMNASFNPFHLVNTYGAFGSIGRVR MSMEG_1761|M.smegmatis_MC2_155 VAFTAMVVSLSFWPLRNLVT--KRQRMNMSYNRYHLVNSYGAFGVVGRTR : :* .: :*:** **:: :*:** *:* ****:***** : *.* MUL_1156|M.ulcerans_Agy99 REVVVEGTSEAELNAQTVWQEYEFKGKPGRVGRLPRQWAPYHLRLDWLMW MMAR_0493|M.marinum_M REVVIEGTSEAELNAQTVWQEYEFKGKPGRVGRLPRQWAPYHLRLDWLMW Mb0240c|M.bovis_AF2122/97 REVVIEGTDESPITEQTVWKAYEFKGKPGDPRRLPRQWAPYHLRLDWLMW Rv0235c|M.tuberculosis_H37Rv REVVIEGTDESPITEQTVWKAYEFKGKPGDPRRLPRQWAPYHLRLDWLMW MAV_4924|M.avium_104 REVVIEGTADDDITDQTVWWEYEFKGKPGGVRRLPRQWAPYHLRLDWLMW Mvan_4797|M.vanbaalenii_PYR-1 YEVVIEGTAEPEPTAQTVWKEYGFKGKPGDLRRMPRQWAPYHLRLDWMMW MSMEG_1761|M.smegmatis_MC2_155 DEVVIEGTDEPTINDETTWREYEFKGKPGDVRRLPRQFAPYHLRLDWLMW ***:*** : . :*.* * ****** *:***:*********:** MUL_1156|M.ulcerans_Agy99 FAAISPGYALPWMTPLLTRLLRNDRATLRLLRRNPFPDTPPRYVRAQLYQ MMAR_0493|M.marinum_M FAAISPGYALPWMTPLLTRLLRNDRATLRLLRRNPFPDTPPRYVRAQLYQ Mb0240c|M.bovis_AF2122/97 FAAISPGYALPWMTPFLNRLLRNDPATLKLLRHNPFPQSPPRYVRAQLYQ Rv0235c|M.tuberculosis_H37Rv FAAISPGYALPWMTPFLNRLLRNDPATLKLLRHNPFPQSPPRYVRAQLYQ MAV_4924|M.avium_104 FAAISPGYAQPWLSPFLQRLLENDRPTLRLLRHNPFPDAPPRYVRARLYE Mvan_4797|M.vanbaalenii_PYR-1 FAALSPAYARDWFRPLVVRLLRNDAATLRLLGHNPFPDEPPRCIRARLYE MSMEG_1761|M.smegmatis_MC2_155 FAAISPTYAHPWLRTFLERLLEGDRATLKLLRTNPFPGEPPRYVRARLYR ***:** ** *: .:: ***..* .**:** **** *** :**:**. MUL_1156|M.ulcerans_Agy99 YPFTTLQELRRHHAWWHRTLIGKYAAPMSLD-------- MMAR_0493|M.marinum_M YRFTTLQELRRDHAWWHRTLIGKYAAPMSLD-------- Mb0240c|M.bovis_AF2122/97 YRFTTVAELRRDRAWWHRTLIGRYVPPMSLRKVASPPAD Rv0235c|M.tuberculosis_H37Rv YRFTTVAELRRDRAWWHRTLIGRYVPPMSLRKVASPPAD MAV_4924|M.avium_104 YRFTTPAELRRDRDWWHRTLIGGYVPPLTLSKLTPQDHG Mvan_4797|M.vanbaalenii_PYR-1 YRFTTWRELRDERRWWHRTLVGEYLPAVALGAGDSPAAR MSMEG_1761|M.smegmatis_MC2_155 YRYSTWDELRRDHVWWQRTLLGDYVPPVTLRAGHGSAAQ * ::* *** .: **:***:* * ..::*