For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LPIPRFLARSSFRNSPSIFHLHYSDRFFAAVCWTGAAVAAAMVLGAGDRLPLWAAMLVWVLLWVLYLSIV NVGQAWYSFGWESLLLEAGTLAVFLGNDDVAPPLLVLWLVRWLLFRVEFGAGMIKMRGDRCWRDLTCLYY HHETQPMPGPLSWFFHHLPKPLHRVEVAGNHVAQLVIPFLLFAPQPVASTAAAVVIVTQLWLVASGNFAW LNWITIVLACGVVSDTALSAVVGVSAAPDVGDPPVWYVAAVVAFTAMVVSLSFWPLRNLVTKRQRMNMSY NRYHLVNSYGAFGVVGRTRDEVVIEGTDEPTINDETTWREYEFKGKPGDVRRLPRQFAPYHLRLDWLMWF AAISPTYAHPWLRTFLERLLEGDRATLKLLRTNPFPGEPPRYVRARLYRYRYSTWDELRRDHVWWQRTLL GDYVPPVTLRAGHGSAAQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1761 | - | - | 100% (438) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0240c | - | 0.0 | 70.00% (430) | transmembrane protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv0235c | - | 0.0 | 70.00% (430) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0493 | - | 0.0 | 68.76% (429) | hypothetical protein MMAR_0493 |
M. avium 104 | MAV_4924 | - | 0.0 | 72.22% (432) | integral membrane protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1156 | - | 0.0 | 66.82% (431) | hypothetical protein MUL_1156 |
M. vanbaalenii PYR-1 | Mvan_4797 | - | 0.0 | 68.72% (438) | hypothetical protein Mvan_4797 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0240c|M.bovis_AF2122/97 --MGWFSAPEYWLGRLALERGTAIIYLIAFVAAAQQFRPLIGEHGMLPVP Rv0235c|M.tuberculosis_H37Rv --MGWFSAPEYWLGRLALERGTAIIYLIAFVAAAQQFRPLIGEHGMLPVP MMAR_0493|M.marinum_M --MEWFSASEYWLGRLVLERGVAAVYLTAFVASALQFRALIGEHGMLPVP MUL_1156|M.ulcerans_Agy99 --MEWFSASEYWLGRLVLERGVAAVYLTAFVASALQFRALIGEHGMLPVP MAV_4924|M.avium_104 --MSWFSAPDYWVGRLVLERGVAVIYLLAFVAAAAQFRALIGEHGMLPIP Mvan_4797|M.vanbaalenii_PYR-1 MYADWFDAPGYWLAREVLQRGVAAIYLIAFVAAARQFRALIGEHGMLPVP MSMEG_1761|M.smegmatis_MC2_155 ----------------------------------------------MPIP :*:* Mb0240c|M.bovis_AF2122/97 RYLAGQSFWRTPSIFHFRYSDRVFAGVCWLGAVLSAAVVAGAASFVPLWA Rv0235c|M.tuberculosis_H37Rv RYLAGQSFWRTPSIFHFRYSDRVFAGVCWLGAVLSAAVVAGAASFVPLWA MMAR_0493|M.marinum_M RYLAHRSFWRTPSVFHFRYSDRLFAGVCWLGAALSAAVVGGTADLVPLWG MUL_1156|M.ulcerans_Agy99 RYLAHRSFWRTPSVFHFRYSDRLCAGVCWLDAALSAAVVGGTADLVPLWG MAV_4924|M.avium_104 RFLAGQSWRRTPSIFHLHYSDRLFAALSWFGAALSAAIVAGAADAVPLWA Mvan_4797|M.vanbaalenii_PYR-1 RFVAQVPFRVAPSVFHLHYSDRFFSAVCWSGAVLATAVAAGGDDLVPLWA MSMEG_1761|M.smegmatis_MC2_155 RFLARSSFRNSPSIFHLHYSDRFFAAVCWTGAAVAAAMVLGAGDRLPLWA *::* .: :**:**::****. :.:.* .*.:::*:. * . :***. Mb0240c|M.bovis_AF2122/97 TMLIWLTLWVLYLSIVNVGQAWYSFGWESLLLETGFLMIFLGNERTAPPI Rv0235c|M.tuberculosis_H37Rv TMLIWLTLWVLYLSIVNVGQAWYSFGWESLLLETGFLMIFLGNERTAPPI MMAR_0493|M.marinum_M AMLMWLTLWVLYLSIVNVGQVWYGFGWESLLLETGFLMVFLGNDRVAPPL MUL_1156|M.ulcerans_Agy99 GMLMWLTLWVLYLSIVNVGQVWYGFGWESLLLETGFLVVFLGNDRVAPPL MAV_4924|M.avium_104 AMLMWLTLWVLYLSIVNVGQTWYSFGWESLLLETGFLMIFLGNAEVAPPL Mvan_4797|M.vanbaalenii_PYR-1 ATLAWLALWVLYLSIVNVGQRWYGFGWESLLLEAGFLAMLLGNDDTAPPL MSMEG_1761|M.smegmatis_MC2_155 AMLVWVLLWVLYLSIVNVGQAWYSFGWESLLLEAGTLAVFLGNDDVAPPL * *: ************* **.*********:* * ::*** .***: Mb0240c|M.bovis_AF2122/97 LTLLLARWLLFRVEFGAGLIKMRGDSCWRSLTCLYYHHETQPMPGPLSWF Rv0235c|M.tuberculosis_H37Rv LTLLLARWLLFRVEFGAGLIKMRGDSCWRSLTCLYYHHETQPMPGPLSWF MMAR_0493|M.marinum_M VMLWLVRWLLFRVEFGAGLIKMRGDACWRNLTCLYYHHETQPMPGPLSWF MUL_1156|M.ulcerans_Agy99 VMLWLVRWLLFRVEFGAGLIKMRGDACWRNLTCLYYHHETQPMPGPLSWF MAV_4924|M.avium_104 LTLWMARLLLFRVEFGAGLIKMRGDPCWRDLTCLYYHHETQPMPGPLSWF Mvan_4797|M.vanbaalenii_PYR-1 LALWLARWLLFRVEFGAGLIKMRGDPCWRDLSCLDYHHETQPMPGPLSWF MSMEG_1761|M.smegmatis_MC2_155 LVLWLVRWLLFRVEFGAGMIKMRGDRCWRDLTCLYYHHETQPMPGPLSWF : * :.* **********:****** ***.*:** *************** Mb0240c|M.bovis_AF2122/97 FHHLPKPLHRIEVAGNHFAQLVVPFGLFTPQPAASIAAAIIVVTQLWLVA Rv0235c|M.tuberculosis_H37Rv FHHLPKPLHRIEVAGNHFAQLVVPFGLFTPQPAASIAAAIIVVTQLWLVA MMAR_0493|M.marinum_M FHRMPRPLHRIEVAGNHFAQLVVPFGLFAPQPIASIAAVIIIVTQLWLVM MUL_1156|M.ulcerans_Agy99 VHRMPRPLHRIEVAGNHFAQLVVPFGLFAPQPIASIAAVIIIVTQLWLVM MAV_4924|M.avium_104 FHHLPKPLHRIEVAGNHFAQLIVPFGLFAPQPVAGVAAAIIVVTQLWLVA Mvan_4797|M.vanbaalenii_PYR-1 FHHLPKPLHRVEVAGNHVAQLVVPFALFAPQPVASVAAGIVIVTQLWLVL MSMEG_1761|M.smegmatis_MC2_155 FHHLPKPLHRVEVAGNHVAQLVIPFLLFAPQPVASTAAAVVIVTQLWLVA .*::*:****:******.***::** **:*** *. ** :::******* Mb0240c|M.bovis_AF2122/97 SGNFSWLNWLTILLACSAIDTSSAAALLP---MPAQPALSAPPQWFAGLV Rv0235c|M.tuberculosis_H37Rv SGNFSWLNWLTILLACSAIDTSSAAALLP---MPAQPALSAPPQWFAGLV MMAR_0493|M.marinum_M SGNFSWLNWLTILLACSAIEQSAARKVLP---IPVRAALPPPPTWFAALV MUL_1156|M.ulcerans_Agy99 SGNFSWLNWLTILLACSAIEQSAARKVLP---IPVRAALPPPPTWFAALV MAV_4924|M.avium_104 SGNFAWLNWVTILLACSAIDDSSVALLLPKSVLPGQGEPSASPLWFVVVV Mvan_4797|M.vanbaalenii_PYR-1 SGNFAWLNWLTILLAFSAVDQSVFAVVLP---MSAPPARAGPPPWFAALV MSMEG_1761|M.smegmatis_MC2_155 SGNFAWLNWITIVLACGVVSDTALSAVVG---VSAAPDVGDPPVWYVAAV ****:****:**:** ..:. : :: :. .* *:. * Mb0240c|M.bovis_AF2122/97 VVFTAAVLLLSYWPARNLLSS--HQRMNMSFNPFHLVNTYGAFGSICRTR Rv0235c|M.tuberculosis_H37Rv VVFTAAVLLLSYWPARNLLSS--HQRMNMSFNPFHLVNTYGAFGSICRTR MMAR_0493|M.marinum_M LIFAATVLVLSYWPARNMLSP--RQRMNMSFNPLHLVNTYGAFGSICRTR MUL_1156|M.ulcerans_Agy99 LIFAATVLVLSYWPARNMLSPPPRQRMNMSFNPVHLVNTYGAFGSICRTR MAV_4924|M.avium_104 VAVTAAVLVMSYWPIRNMLSS--RQRMNMSFNSFHLVNTYGAFGSIGRVR Mvan_4797|M.vanbaalenii_PYR-1 IAGTALTVVLSYWPVRNMLGR--RQQMNASFNPFHLVNTYGAFGSIGRVR MSMEG_1761|M.smegmatis_MC2_155 VAFTAMVVSLSFWPLRNLVTK--RQRMNMSYNRYHLVNSYGAFGVVGRTR : :* .: :*:** **:: :*:** *:* ****:***** : *.* Mb0240c|M.bovis_AF2122/97 REVVIEGTDESPITEQTVWKAYEFKGKPGDPRRLPRQWAPYHLRLDWLMW Rv0235c|M.tuberculosis_H37Rv REVVIEGTDESPITEQTVWKAYEFKGKPGDPRRLPRQWAPYHLRLDWLMW MMAR_0493|M.marinum_M REVVIEGTSEAELNAQTVWQEYEFKGKPGRVGRLPRQWAPYHLRLDWLMW MUL_1156|M.ulcerans_Agy99 REVVVEGTSEAELNAQTVWQEYEFKGKPGRVGRLPRQWAPYHLRLDWLMW MAV_4924|M.avium_104 REVVIEGTADDDITDQTVWWEYEFKGKPGGVRRLPRQWAPYHLRLDWLMW Mvan_4797|M.vanbaalenii_PYR-1 YEVVIEGTAEPEPTAQTVWKEYGFKGKPGDLRRMPRQWAPYHLRLDWMMW MSMEG_1761|M.smegmatis_MC2_155 DEVVIEGTDEPTINDETTWREYEFKGKPGDVRRLPRQFAPYHLRLDWLMW ***:*** : . :*.* * ****** *:***:*********:** Mb0240c|M.bovis_AF2122/97 FAAISPGYALPWMTPFLNRLLRNDPATLKLLRHNPFPQSPPRYVRAQLYQ Rv0235c|M.tuberculosis_H37Rv FAAISPGYALPWMTPFLNRLLRNDPATLKLLRHNPFPQSPPRYVRAQLYQ MMAR_0493|M.marinum_M FAAISPGYALPWMTPLLTRLLRNDRATLRLLRRNPFPDTPPRYVRAQLYQ MUL_1156|M.ulcerans_Agy99 FAAISPGYALPWMTPLLTRLLRNDRATLRLLRRNPFPDTPPRYVRAQLYQ MAV_4924|M.avium_104 FAAISPGYAQPWLSPFLQRLLENDRPTLRLLRHNPFPDAPPRYVRARLYE Mvan_4797|M.vanbaalenii_PYR-1 FAALSPAYARDWFRPLVVRLLRNDAATLRLLGHNPFPDEPPRCIRARLYE MSMEG_1761|M.smegmatis_MC2_155 FAAISPTYAHPWLRTFLERLLEGDRATLKLLRTNPFPGEPPRYVRARLYR ***:** ** *: .:: ***..* .**:** **** *** :**:**. Mb0240c|M.bovis_AF2122/97 YRFTTVAELRRDRAWWHRTLIGRYVPPMSLRKVASPPAD Rv0235c|M.tuberculosis_H37Rv YRFTTVAELRRDRAWWHRTLIGRYVPPMSLRKVASPPAD MMAR_0493|M.marinum_M YRFTTLQELRRDHAWWHRTLIGKYAAPMSLD-------- MUL_1156|M.ulcerans_Agy99 YPFTTLQELRRHHAWWHRTLIGKYAAPMSLD-------- MAV_4924|M.avium_104 YRFTTPAELRRDRDWWHRTLIGGYVPPLTLSKLTPQDHG Mvan_4797|M.vanbaalenii_PYR-1 YRFTTWRELRDERRWWHRTLVGEYLPAVALGAGDSPAAR MSMEG_1761|M.smegmatis_MC2_155 YRYSTWDELRRDHVWWQRTLLGDYVPPVTLRAGHGSAAQ * ::* *** .: **:***:* * ..::*