For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VNCPAEDDPERELEPEPAHGFPARLWRTLERHPPPGVRRLAAFRSPLRGPWLTSVFGLVLLVAMPIVILT GLLSYIAYAPQFGQAIPADVGWLRLPGFDWPAHPSWLYRLTQGLHVGLGLVLIPVVVAKLWSVIPKLFVW PPARSIATLLERLSLLMLVGGVLFEIVTGVLNIQYDYIFGFSFYDGHYFGAWVFIAGFLMHIAVKMPKMI TGLRSFSIREVLRTNVTNTRPEPPDASGLVSADPAEPTVSRRGALALVGSGVLLLGVLTVGQTLGGPLRN IALLLPRGRPAQGNREFPVNKTAAVAGITPEAVGPAWRLVLRGGPNEVVLDRAALAGLPQHTARLPIACV EGWSTVQTWTGVRLSELARRAGVAAPRSARVTSLQRGGAFGEATLQGNQVGASDALLALRGNGEDLPLDH GYPARIIVPALPGVHNTKWVASINFEAG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1110 | - | - | 100% (448) | hypothetical protein MUL_1110 |
M. ulcerans Agy99 | MUL_2279 | - | 5e-10 | 40.70% (86) | membrane-bound oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0224 | - | 0.0 | 77.63% (438) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_4320 | - | 8e-11 | 40.70% (86) | oxidoreductase, molybdopterin binding |
M. tuberculosis H37Rv | Rv0218 | - | 0.0 | 77.63% (438) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4441 | - | 1e-06 | 39.76% (83) | putative oxidoreductase |
M. marinum M | MMAR_0461 | - | 0.0 | 98.88% (448) | hypothetical protein MMAR_0461 |
M. avium 104 | MAV_2997 | - | 1e-167 | 67.83% (429) | oxidoreductase, molybdopterin binding |
M. smegmatis MC2 155 | MSMEG_0998 | - | 5e-70 | 40.55% (397) | oxidoreductase, molybdopterin binding |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0889 | - | 1e-66 | 39.45% (398) | oxidoreductase, molybdopterin binding |
CLUSTAL 2.0.9 multiple sequence alignment MUL_1110|M.ulcerans_Agy99 ---MNCPAEDDPERELEPEPAHGFPARLWRTLERHPPPGVRRLAAFRSPL MMAR_0461|M.marinum_M ---MNCPAEDDPERELEPEPAHGFPARLWRTLERHPPPGVRRLAAFRSPL Mb0224|M.bovis_AF2122/97 --------MSDPARGAEAEDAYGFPAGLWRWLQRHPPPALHRLTRFRSPL Rv0218|M.tuberculosis_H37Rv --------MSDPARGAEAEDAYGFPAGLWRWLQRHPPPALHRLTRFRSPL MAV_2997|M.avium_104 ---------MKPTR----TTGRSFPERLWR-----------------SPL MSMEG_0998|M.smegmatis_MC2_155 -------------------------------------------------M Mvan_0889|M.vanbaalenii_PYR-1 ---------------------------------------------MAASM Mflv_4320|M.gilvum_PYR-GCK MTTPGVRAAGGVAAAAVAVGVASLVGAAFGPEADVRTAVGSSVIDLTPGP MAB_4441|M.abscessus_ATCC_1997 MEHAARRIIAGLIAAAAALAVGQLAAAAVAPDSAPFYAVGNTVVDHTPAA MUL_1110|M.ulcerans_Agy99 RGPWLTSVFGLVLLVAMPIVILTGLLSYIAYAPQFGQAIPADVGWLRLPG MMAR_0461|M.marinum_M RGPWLTSVFGLVLLVAMPIVILTGLLSYIAYAPQFGQAIPADVGWLRLPG Mb0224|M.bovis_AF2122/97 RGPWLTSVFGLVLLVALPFVIITGLLSYIAYAPQLGQAIPGDVGWLRLPA Rv0218|M.tuberculosis_H37Rv RGPWLTSVFGLVLLVALPFVIITGLLSYIAYAPQLGQAIPGDVGWLRLPA MAV_2997|M.avium_104 RGPWLTSVFGSILLVTLPVVIVTGLLSYIAYGPRFGQAVPAEVGWLRLPV MSMEG_0998|M.smegmatis_MC2_155 RGTAITARVGLALGVAVAVCFVTGLISHFIQHPQ--------------PW Mvan_0889|M.vanbaalenii_PYR-1 RGTAITARVGVALGVAIAVCLVTGLISHLIQHPQ--------------PW Mflv_4320|M.gilvum_PYR-GCK VKEWAIATFGTADKLALAVMVLLTIAAIAAVAGLAETRRRPVCSIAIVIA MAB_4441|M.abscessus_ATCC_1997 VREWVIGIFGTSDKAVLFACLTVIIALLAALAGLVEGERR-YGTVLIGLL . .* .: . : MUL_1110|M.ulcerans_Agy99 FDWPAHPSWLYRLTQGLHVGLGLVLIPVVVAKLWSVIPKLFVWPPARSIA MMAR_0461|M.marinum_M FDWPAHPSWLYRLTQGLHVGLGLVLIPVVLAKLWSVIPKLFVWPPARSIA Mb0224|M.bovis_AF2122/97 FTWPTRPSWLYRLTQGLHVGLGLVIIPVVLAKLWSVIPRLFVWPPARSIA Rv0218|M.tuberculosis_H37Rv FTWPTRPSWLYRLTQGLHVGLGLVIIPVVLAKLWSVIPRLFVWPPARSIA MAV_2997|M.avium_104 FDWPTDPSWLYRATQGLHVGLGLVLIPVVLAKLWSVIPRLFAWPPARSIA MSMEG_0998|M.smegmatis_MC2_155 FFWPTRPVWLYRLTQGLHVISGIAAIPLIVVKLWSVWPKLFERPVIGGFV Mvan_0889|M.vanbaalenii_PYR-1 FDWPTRPVWLYRFTQGLHVASGIAAIPLVVVKLWSVWPKLFDRPVIGGPV Mflv_4320|M.gilvum_PYR-GCK GGIGCAAVLSRAGSTGADIIPTLIGTACGVAVLRILQSDRLDGPSSETGT MAB_4441|M.abscessus_ATCC_1997 GVFGAVAAVTRPAGTFAWIWPSVIAAVAGALVLGTLVHR------AQSQA . : : * : . MUL_1110|M.ulcerans_Agy99 TLLERLSLLMLVGGVLFEIVTGVLNIQYDYIFGFSFYDGHYFGAWVFIAG MMAR_0461|M.marinum_M TLLERLSLLMLVGGVLFEIVTGVLNIQYDYIFGFSFYDGHYFGAWVFIAG Mb0224|M.bovis_AF2122/97 QVLERLSVLMLVGGILFQIVTGVLNIQYDYIFGFSFYTGHYFGAWVFIAG Rv0218|M.tuberculosis_H37Rv QVLERLSVLMLVGGILFQIVTGVLNIQYDYIFGFSFYTGHYFGAWVFIAG MAV_2997|M.avium_104 QLLERVSVLMLVGGILFEMVTGVLNIQYDYIFGFSFYTAHYFGAWVFVIG MSMEG_0998|M.smegmatis_MC2_155 RQLERASILVLVGAMLFQLSTGIMNIAQWYAFEFFFTTSHYAMAYVAAGA Mvan_0889|M.vanbaalenii_PYR-1 RALERMSILVLVASVLFQLSTGLLNIAQWYVFGFFFTTAHYAMAYVAVGA Mflv_4320|M.gilvum_PYR-GCK DPGRRRSLLTIGLLAAGAVSGVAGVVISRLASSVAGDRDAFALPRIDTPA MAB_4441|M.abscessus_ATCC_1997 VPDRRRFFGTAAVFALGSAGLYWLGTRWSKGTVVAAERREATVPAPVAPA .* . . . . MUL_1110|M.ulcerans_Agy99 FLMHIAVKMPKMITGLRSFSIREVLRTNVTNTRPEPPDASGLVSADPAEP MMAR_0461|M.marinum_M FLMHIAVKMPKMITGLRSFSIREVLRTNVTDTRPEPPDASGLVSEDPAEP Mb0224|M.bovis_AF2122/97 FLLHIVVKIPHMVTGLRSIPMREVLGTNVADTRAQPCDPDGLVSVNPGEA Rv0218|M.tuberculosis_H37Rv FLLHIVVKIPHMVTGLRSIPMREVLGTNVADTRAQPCDPDGLVSVNPGEA MAV_2997|M.avium_104 FLMHVTIKGRRMWAGLRSMSMRAVLRTPAADTEPEPWRPGGLAAAEPGPA MSMEG_0998|M.smegmatis_MC2_155 VLVHIAVKLP---------VIRRALGEPLEQPSGE------LPGVPGLSR Mvan_0889|M.vanbaalenii_PYR-1 VVVHIGVKLP---------VIRRALGEPLDDVAR------------SGSL Mflv_4320|M.gilvum_PYR-GCK APIPESVQPKGVELPSWVTGNDDFYRIDTALSVPQLSRSEWRLRIHGMVD MAB_4441|M.abscessus_ATCC_1997 PPLPEGIDVKGAVP--YITSNTDFYRIDTALRVPQVSTAEWQLNIHGMVD : :. MUL_1110|M.ulcerans_Agy99 T--VSRRGALALVGSGVLLLGVLTVGQTLGGPLRNIALLLPRGR-PAQGN MMAR_0461|M.marinum_M T--VSRRGALALVGSGVLLLGVLTVGQTLGGPLRNIALLLPRGR-PAQGN Mb0224|M.bovis_AF2122/97 T--LSRRGALGLVGAGVLLIGVLTVGQTLGGFTRKAALLLPRGR-VVSPG Rv0218|M.tuberculosis_H37Rv T--LSRRGALGLVGAGVLLIGVLTVGQTLGGFTRKAALLLPRGR-VVSPG MAV_2997|M.avium_104 T--MSRRGALALVGGGALFLALITAGQTLGGRTRPAALLLPHGRGRGSGA MSMEG_0998|M.smegmatis_MC2_155 G--LTRRTVLRGTWLAVAVATVATAGQTVP-LLRKVSVLAPRTG---QGP Mvan_0889|M.vanbaalenii_PYR-1 G--PSRRTVLRGTWLAVGLATLVTAGQTVP-LLRRVSVLAPRTG---EGP Mflv_4320|M.gilvum_PYR-GCK REVTFTYEDLDRFEVVEKVITLTCVSNPVGGELISNAVWTGYRVKDLLAE MAB_4441|M.abscessus_ATCC_1997 RPRTLMWADLNAMAATQRAVTLTCVSNEIGGNLIGNAVWTGFPIKPILES * : ..: : :: MUL_1110|M.ulcerans_Agy99 REFPVNKTAAVAGITPEAVGPAWRLVLRGGPNEVVLDRAALAGLPQHT-- MMAR_0461|M.marinum_M REFPVNKTAAVAGITPEAVGPAWRLVLRGGPNEVVLDRAALAGLPQHT-- Mb0224|M.bovis_AF2122/97 -DFPVNKTAAAAGITAEAIGPDWRLVLRGGPAEVVLDRATLAGLPQRT-- Rv0218|M.tuberculosis_H37Rv -DFPVNKTAAAAGITAEAIGPDWRLVLCGGPAEVVLDRATLAGLPQRT-- MAV_2997|M.avium_104 NDFDVNRTAAAAGIAAADIGARWRLTLGGGARPVVLDRASLLAMPQHT-- MSMEG_0998|M.smegmatis_MC2_155 QGVPVNRSAIAAGVLRTARSPQYRLTVTDGAVSRAFTLEDLQAMPQVT-- Mvan_0889|M.vanbaalenii_PYR-1 QGVPVNRTAVAAGVLGSARSADYRLTVINGDRAQEFTVDELRAMPQAT-- Mflv_4320|M.gilvum_PYR-GCK AGVRSGADMVLSMSVDGWTAGTPVEALT-GDDALLAIGMNGEPLPIEHGY MAB_4441|M.abscessus_ATCC_1997 VGVHPDADMLLSKSVDGWTAGTPLQVLTDGRDAILAIAMNGTPLPVEHGY . . : . .: * :* MUL_1110|M.ulcerans_Agy99 -ARLPIACVEGWSTVQTWTG-------VRLSELARRAGVAAPRSARVTSL MMAR_0461|M.marinum_M -ARLPIACVEGWSTVQTWTG-------VRLSELARRAGVAAPRSARVTSL Mb0224|M.bovis_AF2122/97 -ARLPLACVEGWSAVRTWSG-------VPLAELALLAGVPAARSARVTSL Rv0218|M.tuberculosis_H37Rv -ARLPLACVEGWSAVRTWSG-------VPLAELALLAGVPAARSARVTSL MAV_2997|M.avium_104 -AVLPIACVEGWSTTQAWTG-------VRLADLARLAGVPAPRSARVSSV MSMEG_0998|M.smegmatis_MC2_155 -HRLPIACVEGWSVDAEWTG-------AVLADLLATVGASPDSDVRMISL Mvan_0889|M.vanbaalenii_PYR-1 -RRLPIVCVEGWSAEGQWSG-------VVLAHLVALVGASPDSDVRMISL Mflv_4320|M.gilvum_PYR-GCK PARLVVPGLYGYVSATKWVTALELTRFDRAQAYWTRLGWSARGPIKTASR MAB_4441|M.abscessus_ATCC_1997 PVRQVVPGLYGYVSATKWVVDWEITRFDKADAYWTIRGWSARGPIKTGCR : : *: * * .. : . MUL_1110|M.ulcerans_Agy99 QRGGAFGEATLQGNQVGASDALLALR-GNGEDLPLDHG-YPARIIVPALP MMAR_0461|M.marinum_M QRGGAFGEATLQGNQVGAPDALLALR-VNGEDLPLDHG-YPARIIVPALP Mb0224|M.bovis_AF2122/97 QRGGAFGEAKLAANQIADPDALLALR-VDGADLSLNHG-YPARIIVPALP Rv0218|M.tuberculosis_H37Rv QRGGAFGEAKLAANQIADPDALLALR-VDGADLSLDHG-YPARIIVPALP MAV_2997|M.avium_104 ERVGAFNAATLHGSQVLHPDALLALR-VNGAELSVDHG-FPARIVVPALP MSMEG_0998|M.smegmatis_MC2_155 EPPGPYSRTTLPARHVRDSQTLIALR-LNGEALDLDHG-YPCRLIAPTRP Mvan_0889|M.vanbaalenii_PYR-1 EPPGPYSRTVLPARHARDDMTLVALD-LNGEPLDLDHG-YPCRLIAPSRP Mflv_4320|M.gilvum_PYR-GCK VDVPRSGQDVALGPVTFGGVAWAQNRGVRSVEVQMDDGPWEQATLGDSYS MAB_4441|M.abscessus_ATCC_1997 IDTPRTGDRLGTGTQIVAGTAWAQHRGIATVEVQIDDGPWLPARLAPEYS . . : : ::.* : : . MUL_1110|M.ulcerans_Agy99 GVHNTKWVASINFEAG---------------------------------- MMAR_0461|M.marinum_M GVHNTKWVASINFEAG---------------------------------- Mb0224|M.bovis_AF2122/97 GVHNTKWVAGIEFHKR---------------------------------- Rv0218|M.tuberculosis_H37Rv GVHNTKWVAGIEFHKR---------------------------------- MAV_2997|M.avium_104 GVHNTKWVGAIDFRAGSDA------------------------------- MSMEG_0998|M.smegmatis_MC2_155 GVLQTKWLSRIEVVP----------------------------------- Mvan_0889|M.vanbaalenii_PYR-1 GVLQTKWLSRIEVVP----------------------------------- Mflv_4320|M.gilvum_PYR-GCK GDTWRMWSYAWEARDTGFHTITVRATDDSGYTQTPDRADPVPDGATGWHS MAB_4441|M.abscessus_ATCC_1997 VDTWRQWWFAWQA-TAGEHIITARATDGTGAVQTDQIASPVPDGATGYPK * : MUL_1110|M.ulcerans_Agy99 ------- MMAR_0461|M.marinum_M ------- Mb0224|M.bovis_AF2122/97 ------- Rv0218|M.tuberculosis_H37Rv ------- MAV_2997|M.avium_104 ------- MSMEG_0998|M.smegmatis_MC2_155 ------- Mvan_0889|M.vanbaalenii_PYR-1 ------- Mflv_4320|M.gilvum_PYR-GCK ITFAVK- MAB_4441|M.abscessus_ATCC_1997 RLVTVAA