For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MADRNGYRSPQTPLGQALRIAWWSYVHRVDTDMEAAGFERRRFSMNYVFALYALPGPMTISQMGRQFGVS RQAASKLVAELRDRGYVQTAPSPTDQREKVVELTPKAMEYLAARQRAAAALDRAIQQRVGADGVEQLHQI LDAVGEAARGAVEFDLANLYREPDLW
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0952 | - | - | 100% (166) | putative regulatory protein |
M. ulcerans Agy99 | MUL_4886 | - | 6e-11 | 34.38% (96) | hypothetical protein MUL_4886 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2302 | - | 6e-07 | 26.44% (87) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4237 | - | 7e-92 | 99.40% (166) | putative regulatory protein |
M. avium 104 | MAV_5249 | - | 8e-09 | 30.85% (94) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4344 | - | 6e-08 | 31.52% (92) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2302|M.gilvum_PYR-GCK -------MDEIPATAVLMFMAHRDVETRVMAALGQAGHDDITMAQSRLMQ Mvan_4344|M.vanbaalenii_PYR-1 -------MDAQPGTAVLMYIAHREVESRVMAALARSGVGDVTVAQSRLLQ MAV_5249|M.avium_104 -------------MPALVNLVAAAGAPRLRAAFAEAALDGIRPAQSLALV MUL_0952|M.ulcerans_Agy99 MADRNGYRSPQTPLGQALRIAWWSYVHRVDTDMEAAGFERRRFSMNYVFA MMAR_4237|M.marinum_M MADRNGYRSPQTPLGQALRIAWWSYVHRVDTDMEAAGFERRRFSMNYVFA : :. *: : : :. : . : Mflv_2302|M.gilvum_PYR-GCK RLD-PGGMRLTELAEQARVTKQTAGALIDQLERSGYVTRLPDPTDARARL Mvan_4344|M.vanbaalenii_PYR-1 RLD-PGGMRLTDLAEQARVTKQTAGALVDQLERAGYVTRQPDPSDARARL MAV_5249|M.avium_104 PLA-AGGLHASDLADRLRVSRQAVAQAVAALERHGYVTRTPDPADARARM MUL_0952|M.ulcerans_Agy99 LYALPGPMTISQMGRQFGVSRQAASKLVAELRDRGYVQTAPSPTDQREKV MMAR_4237|M.marinum_M LYALPGPMTISQMGRQFGVSRQAASKLVAELRDRGYVQTAPSPTDQREKV .* : :::. : *::*:.. : *. *** *.*:* * :: Mflv_2302|M.gilvum_PYR-GCK VTLSDRGVEMCRRAGAEVGRVEAEWRERLGDTAFDAMRDALVTLASE--- Mvan_4344|M.vanbaalenii_PYR-1 VTLTDKGAEMCRRAGAEVARVEQEWRQHLGDDAYGALRAALLSLREITDP MAV_5249|M.avium_104 IELTPRGRQALQVMRANAIAMEKRWRKVLGERRLTELRETLTMLLAAERE MUL_0952|M.ulcerans_Agy99 VELTPKAMEYLAARQRAAAALDRAIQQRVGADGVEQLHQILDAVGEAARG MMAR_4237|M.marinum_M VELTPKAMEYLAARQRAAAALDRAIQQRVGADGVEQLHQILDAVGEAARG : *: :. : . :: :: :* :: * : Mflv_2302|M.gilvum_PYR-GCK ---------------- Mvan_4344|M.vanbaalenii_PYR-1 YL-------------- MAV_5249|M.avium_104 PGG------------- MUL_0952|M.ulcerans_Agy99 AVEFDLANLYREPDLW MMAR_4237|M.marinum_M AVEFDPANLYREPDLW