For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAHSAHDDADNDTEYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRGLERAQMRALGLLKGACAQVN MDLGLLAPEKAQAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAGANGVAVHPNDDVNM SQSSNDTFPTATHIAATEAAVSHLIPALEILQDALATKALEWQSVVKSGRTHLMDAVPVTLGQEFSGYAR QIEAGIERVRATLPRLGELAIGGTAVGTGLNAPEGFGVKVVSVLVSQTGLPQLRTAANSFEAQAARDGLV EASGALRIIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDA AVAWGGANGAFELNVYIPMMARNILESFTLLTNVSKLFAQRCIAGLTANAEHLRELAESSPSIVTPLNSA IGYEEAAAVAKQALKERKTIRQTVIDRGLIGNKLSLEELDRRLDVLAMAKVEATDD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0181 | fumC | - | 100% (476) | fumarate hydratase |
M. ulcerans Agy99 | MUL_1651 | argH | 5e-13 | 24.36% (431) | argininosuccinate lyase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1128c | fumC | 0.0 | 91.03% (468) | fumarate hydratase |
M. gilvum PYR-GCK | Mflv_2065 | fumC | 0.0 | 85.87% (467) | fumarate hydratase |
M. tuberculosis H37Rv | Rv1098c | fumC | 0.0 | 91.03% (468) | fumarate hydratase |
M. leprae Br4923 | MLBr_01947 | fumC | 0.0 | 89.25% (465) | fumarate hydratase |
M. abscessus ATCC 19977 | MAB_1250c | fumC | 0.0 | 84.70% (464) | fumarate hydratase |
M. marinum M | MMAR_4368 | fumC | 0.0 | 99.16% (476) | fumarase Fum |
M. avium 104 | MAV_1221 | fumC | 0.0 | 90.56% (466) | fumarate hydratase |
M. smegmatis MC2 155 | MSMEG_5240 | fumC | 0.0 | 87.72% (464) | fumarate hydratase |
M. thermoresistible (build 8) | TH_0559 | fum | 0.0 | 85.53% (463) | PROBABLE FUMARASE FUM (Fumarate hydratase) |
M. vanbaalenii PYR-1 | Mvan_4649 | fumC | 0.0 | 86.88% (465) | fumarate hydratase |
CLUSTAL 2.0.9 multiple sequence alignment MUL_0181|M.ulcerans_Agy99 MAHSAHDDADNDTEYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRG MMAR_4368|M.marinum_M MAHSAHDDADNDTEYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRG Mb1128c|M.bovis_AF2122/97 MAVDA-DSAN----YRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRG Rv1098c|M.tuberculosis_H37Rv MAVDA-DSAN----YRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRG MLBr_01947|M.leprae_Br4923 MKRTQFMADS--AEYRIEHDTMGEVRVPAIALWRAQTQRAVENFPISGRG MAV_1221|M.avium_104 ---MATDDGD--TDYRIERDTMGEVRVPAKALWRAQTQRAVENFPISGRG Mflv_2065|M.gilvum_PYR-GCK ----MAD---KDVEYRIEHDTMGEVRVPKDALWRAQTQRAVENFPISFRP Mvan_4649|M.vanbaalenii_PYR-1 ----MTDSAVDNTEYRIEHDTMGEVRVPKNALWRAQTQRAVENFPISFRP MSMEG_5240|M.smegmatis_MC2_155 -------MADTDVEYRIEHDTMGEVRVPKDALWRAQTQRAVENFPISFRG TH_0559|M.thermoresistible__bu -MSTDSAGQNGATEYRIEHDTMGEVRVPVNALWRAQTQRAVENFPISGRG MAB_1250c|M.abscessus_ATCC_199 ---------MSEQQYRIEHDTMGEVRVPAEALWRAQTQRAVENFPISGRG ****:********* ***************** * MUL_0181|M.ulcerans_Agy99 LERAQMRALGLLKGACAQVNMDLGLLAPEKAQAIIAAAAEIADGQHDDQF MMAR_4368|M.marinum_M LERAQIRALGLLKGACAQVNMDLGLLAPEKAEAIIAAAAEIADGQHDDQF Mb1128c|M.bovis_AF2122/97 LERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQF Rv1098c|M.tuberculosis_H37Rv LERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQF MLBr_01947|M.leprae_Br4923 LERTQIRALGLLKGACAQVNKDLGLLASEKANAIIAAAATIADGYHDDQF MAV_1221|M.avium_104 LERTQIRALGLLKGACAQVNKDLGLLAPEKADAIIAAAAEIADGRHDDQF Mflv_2065|M.gilvum_PYR-GCK LERTQIRAMGLLKGACAQVNKDLGLLAPEKADAIIAAAAEIADGRHDDQF Mvan_4649|M.vanbaalenii_PYR-1 LERTQIRALGLLKGACAQVNKDLGLLAPEKADAIIAAAAEIADGRHDDQF MSMEG_5240|M.smegmatis_MC2_155 LERTQIRALGLLKAACAQVNKDLGLLDPEKADAIIAAAGEIAEGKHDDQF TH_0559|M.thermoresistible__bu LERAQIRALGLLKGACAQVNKDLGLLDPAKADAIIAAANEIAEGRHDDQF MAB_1250c|M.abscessus_ATCC_199 LERTQIRALGLLKGACAQVNKDLGLLAAEKADAIIAAAQEIADGKHDDQF ***:*:**:****.****** ***** . **:****** **:* ***** MUL_0181|M.ulcerans_Agy99 PIDVFQTGSGTSSNMNTNEVIASIAGANG--VAVHPNDDVNMSQSSNDTF MMAR_4368|M.marinum_M PIDVFQTGSGTSSNMNTNEVIASIAGANG--VAVHPNDDVNMSQSSNDTF Mb1128c|M.bovis_AF2122/97 PIDVFQTGSGTSSNMNTNEVIASIAAKGG--VTLHPNDDVNMSQSSNDTF Rv1098c|M.tuberculosis_H37Rv PIDVFQTGSGTSSNMNTNEVIASIAAKGG--VTLHPNDDVNMSQSSNDTF MLBr_01947|M.leprae_Br4923 PIDVFQTGSGTSSNMNTNEVIGSIAAANG--VPVHPNDDVNMSQSSNDTF MAV_1221|M.avium_104 PIDVFQTGSGTSSNMNTNEVIASIAAANG--VTVHPNDDVNMSQSSNDTF Mflv_2065|M.gilvum_PYR-GCK PIDVFQTGSGTSSNMNTNEVIASIAAANG--VTIHPNDDVNMSQSSNDTF Mvan_4649|M.vanbaalenii_PYR-1 PIDVFQTGSGTSSNMNTNEVIASIAAANG--VTVHPNDDVNMSQSSNDTF MSMEG_5240|M.smegmatis_MC2_155 PIDVFQTGSGTSSNMNTNEVIASIAAANG--VTVHPNDHVNMSQSSNDTF TH_0559|M.thermoresistible__bu PIDVFQTGSGTSSNMNTNEVIASIAARNG--VTVHPNDDVNMSQSSNDTF MAB_1250c|M.abscessus_ATCC_199 PIDVFQTGSGTSSNMNANEVIASIAAQATPPVVVHPNDDVNMSQSSNDTF ****************:****.***. * :****.*********** MUL_0181|M.ulcerans_Agy99 PTATHIAATEAAVSHLIPALEILQDALATKALEWQSVVKSGRTHLMDAVP MMAR_4368|M.marinum_M PTATHIAATEAAVSHLIPALEILQDALATKALEWQSVVKSGRTHLMDAVP Mb1128c|M.bovis_AF2122/97 PTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVP Rv1098c|M.tuberculosis_H37Rv PTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVP MLBr_01947|M.leprae_Br4923 PTATHIAATEAAVRHLIPALQELHAALATKSSEWHTVVKSGRTHLMDAVP MAV_1221|M.avium_104 PTATHIAATEAAVRHLIPALQVLHDALASKAREWHTVVKSGRTHLMDAVP Mflv_2065|M.gilvum_PYR-GCK PTATHIAATEAAVRHLIPALEVLHESLDAKARQWRTTVKSGRTHLMDAVP Mvan_4649|M.vanbaalenii_PYR-1 PTATHIAATEAAVRHLIPALEVLHESLDAKARQWRTTVKSGRTHLMDAVP MSMEG_5240|M.smegmatis_MC2_155 PTATHIAATEAAVRHLIPALEVLHASLAAKAKQWRTVVKSGRTHLMDAVP TH_0559|M.thermoresistible__bu PTATHVAATEAAVRDLIPALEVLHASLAAKARQWRTVVKSGRTHLMDAVP MAB_1250c|M.abscessus_ATCC_199 PTATHLAATEAAVRDLIPALEYLQQALATKAKAWKTVVKSGRTHLMDAVP *****:******* .*****: *: :* :*: *::.************* MUL_0181|M.ulcerans_Agy99 VTLGQEFSGYARQIEAGIERVRATLPRLGELAIGGTAVGTGLNAPEGFGV MMAR_4368|M.marinum_M VTLGQEFSGYARQIEAGIERVRATLPRLGELAIGGTAVGTGLNAPEGFGV Mb1128c|M.bovis_AF2122/97 VTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDDFGV Rv1098c|M.tuberculosis_H37Rv VTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDDFGV MLBr_01947|M.leprae_Br4923 VTLGQEFGGYARQIEAGIERVRATLPRLGELAIGGTAVGTGLNAPDGFGA MAV_1221|M.avium_104 VTLGQEFSGYARQIEAGIERVRATLPRLGELAIGGTAVGTGLNAPDGFGA Mflv_2065|M.gilvum_PYR-GCK VTLGQEFGGYARQIEAGIERVKATLPRLGELAIGGTAVGTGLNAPDGFGA Mvan_4649|M.vanbaalenii_PYR-1 VTLGQEFGGYARQIQAGIERVKASLPRLGELAIGGTAVGTGLNAPDGFGA MSMEG_5240|M.smegmatis_MC2_155 VTLGQEFGGYARQIEAGIERVKATLPRLGELAIGGTAVGTGLNAPEGFGA TH_0559|M.thermoresistible__bu VTLGQEFGGYARQIEAGIERVRATLPRLGELPIGGTAVGTGLNAPEGFGP MAB_1250c|M.abscessus_ATCC_199 VTLGQEFGGYARQIEAGIERVKATLPRLGELPIGGTAVGTGLNAPDGFGA *******.******:******:* *******.*************:.** MUL_0181|M.ulcerans_Agy99 KVVSVLVSQTGLPQLRTAANSFEAQAARDGLVEASGALRIIAVSLTKIAN MMAR_4368|M.marinum_M KVVSVLVSQTGLPQLRTAANSFEAQAARDGLVEASGALRTIAVSLTKIAN Mb1128c|M.bovis_AF2122/97 RVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIAN Rv1098c|M.tuberculosis_H37Rv RVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIAN MLBr_01947|M.leprae_Br4923 KVVEALIATTGLTELRPAANSFEAQAARDGLVEASGALRTIAVSLTKIAN MAV_1221|M.avium_104 KVVETLIASTGLSELRTATNSFEAQAARDGLVEASGALRTIAVSLTKIAN Mflv_2065|M.gilvum_PYR-GCK KVVEVLVDQTGIAELRTAKDSFEAQAARDGLVEASGALKTIAASLTKIAN Mvan_4649|M.vanbaalenii_PYR-1 KVVDVLVDQTGIAELRTAVDSFEAQAARDGLVEASGALKTIAVSLTKIAN MSMEG_5240|M.smegmatis_MC2_155 KVVEVLVNETGLAELRTAVDSFEAQAARDGLVEASGALRTIAVSLTKIAN TH_0559|M.thermoresistible__bu KVVEVLVAQTGLAELRPAVDSFEAQAARDGLVEASGALRTIAVSLTKIAN MAB_1250c|M.abscessus_ATCC_199 KVVEVLKQSTGLSELKTASDSFEAQAARDGLVEGSGALKTIAASLTKIAN :** .* **:.:*:.* :*************.****: **.******* MUL_0181|M.ulcerans_Agy99 DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGN MMAR_4368|M.marinum_M DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGN Mb1128c|M.bovis_AF2122/97 DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGN Rv1098c|M.tuberculosis_H37Rv DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGN MLBr_01947|M.leprae_Br4923 DIRLMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGN MAV_1221|M.avium_104 DIRWMGSGPLTGLAEIALPDLQPGSSIMPGKVNPVIPEAVTQVAAQVIGN Mflv_2065|M.gilvum_PYR-GCK DIRWMGSGPLTGLGELQLPDLQPGSSIMPGKVNPVIPEAVTQVAAQVIGN Mvan_4649|M.vanbaalenii_PYR-1 DIRWMGSGPLTGLGELQLPDLQPGSSIMPGKVNPVIPEAVTQVAAQVIGN MSMEG_5240|M.smegmatis_MC2_155 DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVACQVVGN TH_0559|M.thermoresistible__bu DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVIPEAVTQVACQVVGN MAB_1250c|M.abscessus_ATCC_199 DIRWMGSGPLTGLGEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGN *** *********.*: ******************:********.**:** MUL_0181|M.ulcerans_Agy99 DAAVAWGGANGAFELNVYIPMMARNILESFTLLTNVSKLFAQRCIAGLTA MMAR_4368|M.marinum_M DAAVAWGGANGAFELNVYIPMMARNILESFTLLTNVSKLFAQRCIAGLTA Mb1128c|M.bovis_AF2122/97 DAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTA Rv1098c|M.tuberculosis_H37Rv DAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTA MLBr_01947|M.leprae_Br4923 DAAVAWGGANGAFELNVYIPMMARNILESYQLLTNVSRLFAERCIKGLSA MAV_1221|M.avium_104 DAAVAVGGLSGAFELNVYIPMMARNILESFKLLTNVSRLFAERCISGLSA Mflv_2065|M.gilvum_PYR-GCK DAAVTVGGLSGAFELNVYIPMMARNVLESFTLLANVSKLFAAKCIDGLIA Mvan_4649|M.vanbaalenii_PYR-1 DAAVTVGGLSGAFELNVYIPMMARNLLESFTLLANVSKLFAAKCIDGLVA MSMEG_5240|M.smegmatis_MC2_155 DAAIAFGGASGAFELNVYIPMMARNLLESFTLLSNVSRLFAERCIDGLVA TH_0559|M.thermoresistible__bu DAAIAFGGASGAFELNVYIPMMARNLLESFRLLANSSRLFAEKCIDGLVA MAB_1250c|M.abscessus_ATCC_199 DAAITVGGLSGAFELNVYIPVMARNLLESFTLLANVSRLFVDKCVDGLVA ***:: ** .**********:****:***: **:* *:**. :*: ** * MUL_0181|M.ulcerans_Agy99 NAEHLRELAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRG MMAR_4368|M.marinum_M NAEHLRELAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRG Mb1128c|M.bovis_AF2122/97 NVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRG Rv1098c|M.tuberculosis_H37Rv NVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRG MLBr_01947|M.leprae_Br4923 NIEHLRELAESSQSIVTPLNSAIGYEEAAAVVKQALKERKTLRQTVIDRG MAV_1221|M.avium_104 NVEHLRELAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRG Mflv_2065|M.gilvum_PYR-GCK NDQHIREQAESSPSIVTPLNSAIGYEEAAKVAKQALKEKKTIRQTVIDRG Mvan_4649|M.vanbaalenii_PYR-1 NDDHLRELAESSPSIVTPLNSAIGYEEAAKVAKQALKEKKTIRQTVIDRG MSMEG_5240|M.smegmatis_MC2_155 NEERLRELAESSPSIVTPLNSAIGYEEAAKVAKQALAEKKTIRQTVIDRG TH_0559|M.thermoresistible__bu NEERLRKLAESSPSIVTPLNRAIGYEEAAKVAKQALAEGKTIRQTVIDRG MAB_1250c|M.abscessus_ATCC_199 NEDHLRTLAESSPSIVTPLNSAIGYEEAAAVAKEALKERKTIRQTVIDRG * :::* **** ******* ******** *.*:** * **:******** MUL_0181|M.ulcerans_Agy99 LIGNKLSLEELDRRLDVLAMAKVEATDD--- MMAR_4368|M.marinum_M LIGDKLSLEELDRRLDVLAMAKVEATDD--- Mb1128c|M.bovis_AF2122/97 LIGDRLSIEDLDRRLDVLAMAKAEQLDSDRL Rv1098c|M.tuberculosis_H37Rv LIGDRLSIEDLDRRLDVLAMAKAEQLDSDRL MLBr_01947|M.leprae_Br4923 LIGDKLSLEELDRRLDVLAMAKVKPADS--- MAV_1221|M.avium_104 LIGDKLSLEELDRRLDVLAMAKVKPQD---- Mflv_2065|M.gilvum_PYR-GCK LIGDKLSEEELDKRLDVLAMAKVKPGDQ--- Mvan_4649|M.vanbaalenii_PYR-1 LIGDKLSEEELDRRLDVLAMAKVRDGS---- MSMEG_5240|M.smegmatis_MC2_155 LIGDKLSLEELDRRLDVLAMARVKDGE---- TH_0559|M.thermoresistible__bu LVGEKLTLEELDELLDVLAMARVKDND---- MAB_1250c|M.abscessus_ATCC_199 LIGDKLSIEELDKRLDVLAMAKVKD------ *:*::*: *:**. *******:..