For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VDGLEMATAERTELADLLATLTPEQWEAQSLCERWRVRDVVAHVMSFDDASLLGMFGRVIRGRIIDANQV WVDELASLSTEQLLDQLRARLRPRGLATTFGGRLALLDVTMHHQDIRRPLGLPRQIPAERLRCVLGDSLR SPELPGWHLARGVRLTTSDLDWSHGSGPELTGSAEAVLMAVSGRHSAIGELAGPGQQVLARRLARRQRRT HDRARSPPR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0076 | - | - | 100% (219) | hypothetical protein MUL_0076 |
| M. ulcerans Agy99 | MUL_0646 | - | 9e-22 | 34.95% (206) | hypothetical protein MUL_0646 |
| M. ulcerans Agy99 | MUL_3624 | - | 4e-11 | 31.08% (148) | hypothetical protein MUL_3624 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2062 | - | 2e-55 | 51.50% (200) | hypothetical protein Mb2062 |
| M. gilvum PYR-GCK | Mflv_2303 | - | 2e-13 | 31.94% (191) | hypothetical protein Mflv_2303 |
| M. tuberculosis H37Rv | Rv2036 | - | 3e-55 | 51.50% (200) | hypothetical protein Rv2036 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1584 | - | 1e-50 | 50.25% (203) | hypothetical protein MAB_1584 |
| M. marinum M | MMAR_0893 | - | 2e-21 | 34.95% (206) | hypothetical protein MMAR_0893 |
| M. avium 104 | MAV_0227 | - | 2e-56 | 51.49% (202) | hypothetical protein MAV_0227 |
| M. smegmatis MC2 155 | MSMEG_6779 | - | 3e-17 | 33.33% (198) | hypothetical protein MSMEG_6779 |
| M. thermoresistible (build 8) | TH_1248 | - | 2e-59 | 56.00% (200) | CONSERVED HYPOTHETICAL PROTEIN |
| M. vanbaalenii PYR-1 | Mvan_5391 | - | 5e-28 | 40.12% (162) | hypothetical protein Mvan_5391 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2062|M.bovis_AF2122/97 MIAADDDTEKSMMDMARAERAELAAFLTTLT---LQQWETPSLCAGWSVK
Rv2036|M.tuberculosis_H37Rv MIAADDDTEKSMMDMARAERAELAAFLTTLT---LQQWETPSLCAGWSVK
MAV_0227|M.avium_104 -------MTSELMAMARAERADLAEFLATLG---PRDWEAPSLCSRWSVK
TH_1248|M.thermoresistible__bu -----------MMDMAYAERTELAQFLATLT---PEQWATPSLCARWTVK
MUL_0076|M.ulcerans_Agy99 ---------MDGLEMATAERTELADLLATLT---PEQWEAQSLCERWRVR
MAB_1584|M.abscessus_ATCC_1997 --------MQSAMELARAERIDLADFLAGLT---AEQWDAPSLCTQWRVR
Mvan_5391|M.vanbaalenii_PYR-1 ------------------------------------------------MR
MMAR_0893|M.marinum_M --------MADIWTTIAAERGALADDLATLP---ADRWETPSLCAGWRVR
Mflv_2303|M.gilvum_PYR-GCK ------MNRDTVWQHIDEQRTSLADLIDDLGSRGPGVWDTPSLCAGWSVR
MSMEG_6779|M.smegmatis_MC2_155 -MRLRTAERDRVFDAVAHERRGIADLIDGLT---PEQLATPSLCGGWDVK
::
Mb2062|M.bovis_AF2122/97 EVVAHMISYEDLGVFGLLKRFAKG--RIVRANEVGVDEFAGLSPQELVDY
Rv2036|M.tuberculosis_H37Rv EVVAHMISYEDLGVFGLLKRFAKG--RIVRANEVGVDEFAGLSPQELADY
MAV_0227|M.avium_104 DVVAHVISYEELGAFGLLKRFAKG--WVVRANQVGVDEFADLTPQQLLEF
TH_1248|M.thermoresistible__bu DVVAHVISYEELGPFGLLKRFAKG--YVVRANQVGVDEFGSLSPEQLLDF
MUL_0076|M.ulcerans_Agy99 DVVAHVMSFDDASLLGMFGRVIRG--RIIDANQVWVDELASLSTEQLLDQ
MAB_1584|M.abscessus_ATCC_1997 DVVTHMIGYEDLSRAEFYSRVAKAGFNPNKANANRVAELAGRTPQELLAM
Mvan_5391|M.vanbaalenii_PYR-1 DVAAHTVGYLGQSVPGLIRNMIRDRGDVDRLNARMLPAVAALTPAELVEL
MMAR_0893|M.marinum_M DVVAHLCATASLNPARFFLGMAAAGFSFDRFTNGQLAKHLGPDPAATLDE
Mflv_2303|M.gilvum_PYR-GCK NVAAHLTHSTMAPPR-MLWEAIRSGFRFDAMVDRLALADPRSP-AEISAH
MSMEG_6779|M.smegmatis_MC2_155 TVAAHLVSDFLDGFRGFLVSGIRHGN-MDKGIDALARRRAQAPAAEIAET
*.:* :
Mb2062|M.bovis_AF2122/97 VGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQPRTIPAQRLDRVLR
Rv2036|M.tuberculosis_H37Rv VGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQPRTIPAQRLDRVLR
MAV_0227|M.avium_104 LREHLEPRGLTAGFGGMIALVDGTIHHQDIRRALGRPRVVPPDRLQRVLS
TH_1248|M.thermoresistible__bu LNRHLWPRGLTAGFGGMIALVDGTVHHQDIRRPLGRPRTIAADRLLRVLR
MUL_0076|M.ulcerans_Agy99 LRARLRPRGLATTFGGRLALLDVTMHHQDIRRPLGLPRQIPAERLRCVLG
MAB_1584|M.abscessus_ATCC_1997 VRAAQTPGVLTSGFGGRIALLDGIIHQQDIRRPLGMPRQIPGDRLTVAMD
Mvan_5391|M.vanbaalenii_PYR-1 MGRDSTPTGAAGLYGGRVALIECVIHQQDIRRPLGLDFDVPEDSLRVSLD
MMAR_0893|M.marinum_M FRGLQHATSAPPGPK-VSWLGEIVLHGADIRQPLGIPHTYSPGALRQTID
Mflv_2303|M.gilvum_PYR-GCK LRAAVGSRRHPPGTTAFEPLIDVLVHAQDICVPLGID-RPMPVDAAVAAA
MSMEG_6779|M.smegmatis_MC2_155 LRTRAEFRLSPPVTGPLAGLTDVLVHGADIRIPLGLAHRPDPANVAWVLD
. . * : :* ** .**
Mb2062|M.bovis_AF2122/97 LMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAGR
Rv2036|M.tuberculosis_H37Rv LMPKNPRLR--ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAGR
MAV_0227|M.avium_104 LVPGNPRLG--AGRRIRGLRLRATDIDWTHGDGPQVSGPGEALLMAMSGR
TH_1248|M.thermoresistible__bu SVPGNPRLG--AGRRIRGLRLHATDIDWTHGEGPEVSGTGEALLMAMTGR
MUL_0076|M.ulcerans_Agy99 DSLRSPELP--GWHLARGVRLTTSDLDWSHGSGPELTGSAEAVLMAVSGR
MAB_1584|M.abscessus_ATCC_1997 FARWAPPVR--GALRARGVRLVATDLDWSRGSGPEVTGPAEALLMAMAAR
Mvan_5391|M.vanbaalenii_PYR-1 YARISPVIG--GTRRTRGLRLVATDMDWSAGTGPEVCGTAEALLLAMTGR
MMAR_0893|M.marinum_M FYRGSNLLSG-AKKRISGLELCATDDDWRHGQGERVEGPLLSLLLAMTGR
Mflv_2303|M.gilvum_PYR-GCK ERVWEMGFPFRARTRLAGVRLVATDADFAVGAGREHAAPVRELLMVLTGR
MSMEG_6779|M.smegmatis_MC2_155 FLAGRTQFGFFPQRRLRGLALHDGDTGRTWGAGQEIRGPGVALMLAVCGR
. *: * * . * * . .. :::.: .*
Mb2062|M.bovis_AF2122/97 PAAV-SDLSGPGKPTLAGRLG---------------
Rv2036|M.tuberculosis_H37Rv PAAV-SDLSGPGKPTLAGRLG---------------
MAV_0227|M.avium_104 PAAL-ADLDGPGRATLAARLGQ--------------
TH_1248|M.thermoresistible__bu AAVV-DELGGPGKPVLAGRLR---------------
MUL_0076|M.ulcerans_Agy99 HSAI-GELAGPGQQVLARRLARRQRRTHDRARSPPR
MAB_1584|M.abscessus_ATCC_1997 PCAL-AELEGPGKSTLAQHIS---------------
Mvan_5391|M.vanbaalenii_PYR-1 ADAVRAELSGEGIPHLR-------------------
MMAR_0893|M.marinum_M AAGC-VDLTGPGAQLLRSRCSGT-------------
Mflv_2303|M.gilvum_PYR-GCK AAAV-ADAR---------------------------
MSMEG_6779|M.smegmatis_MC2_155 TVAL-DRLTGPGVTVLRSRLT---------------