For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RLRTAERDRVFDAVAHERRGIADLIDGLTPEQLATPSLCGGWDVKTVAAHLVSDFLDGFRGFLVSGIRHG NMDKGIDALARRRAQAPAAEIAETLRTRAEFRLSPPVTGPLAGLTDVLVHGADIRIPLGLAHRPDPANVA WVLDFLAGRTQFGFFPQRRLRGLALHDGDTGRTWGAGQEIRGPGVALMLAVCGRTVALDRLTGPGVTVLR SRLT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_6779 | - | - | 100% (215) | hypothetical protein MSMEG_6779 |
| M. smegmatis MC2 155 | MSMEG_5349 | - | 3e-19 | 36.65% (191) | hypothetical protein MSMEG_5349 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2062 | - | 1e-19 | 33.82% (207) | hypothetical protein Mb2062 |
| M. gilvum PYR-GCK | Mflv_2303 | - | 2e-21 | 37.76% (196) | hypothetical protein Mflv_2303 |
| M. tuberculosis H37Rv | Rv2036 | - | 4e-20 | 34.30% (207) | hypothetical protein Rv2036 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4788c | - | 1e-23 | 36.15% (213) | hypothetical protein MAB_4788c |
| M. marinum M | MMAR_0893 | - | 5e-23 | 34.95% (206) | hypothetical protein MMAR_0893 |
| M. avium 104 | MAV_0227 | - | 3e-20 | 34.83% (201) | hypothetical protein MAV_0227 |
| M. thermoresistible (build 8) | TH_1248 | - | 3e-21 | 35.27% (207) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_0646 | - | 3e-22 | 34.47% (206) | hypothetical protein MUL_0646 |
| M. vanbaalenii PYR-1 | Mvan_4343 | - | 3e-21 | 35.42% (192) | hypothetical protein Mvan_4343 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0893|M.marinum_M --------MADIWTTIAAERGALADDLATLP---ADRWETPSLCAGWRVR
MUL_0646|M.ulcerans_Agy99 --------MADIWTTIAAERGALADDLATLP---ADRWETSSLCAGWRVR
Mb2062|M.bovis_AF2122/97 MIAADDDTEKSMMDMARAERAELAAFLTTLT---LQQWETPSLCAGWSVK
Rv2036|M.tuberculosis_H37Rv MIAADDDTEKSMMDMARAERAELAAFLTTLT---LQQWETPSLCAGWSVK
MAV_0227|M.avium_104 -------MTSELMAMARAERADLAEFLATLG---PRDWEAPSLCSRWSVK
TH_1248|M.thermoresistible__bu -----------MMDMAYAERTELAQFLATLT---PEQWATPSLCARWTVK
MAB_4788c|M.abscessus_ATCC_199 ------MSRARVYAMVQQEKRDLAALLRELT---PQEWESPSLCAGWRVR
Mflv_2303|M.gilvum_PYR-GCK ------MNRDTVWQHIDEQRTSLADLIDDLGSRGPGVWDTPSLCAGWSVR
Mvan_4343|M.vanbaalenii_PYR-1 ------MDRDTVWHHIDNQRLELADLIDEIDARDRALWDTPSLCAGWTVR
MSMEG_6779|M.smegmatis_MC2_155 -MRLRTAERDRVFDAVAHERRGIADLIDGLT---PEQLATPSLCGGWDVK
: :: :* : : :.***. * *:
MMAR_0893|M.marinum_M DVVAHLCATASLNPARFFLGMAAAGFSFDRFTNGQLAKHLGPDPAATLDE
MUL_0646|M.ulcerans_Agy99 DVVAHLCATASLNPARFFLGMAAAGFSFDRFTNGQLAKHLGPDPAATLDE
Mb2062|M.bovis_AF2122/97 EVVAHMISY--EDLGVFGLLKRFAKGRIVRANEVGVDEFAGLSPQELVDY
Rv2036|M.tuberculosis_H37Rv EVVAHMISY--EDLGVFGLLKRFAKGRIVRANEVGVDEFAGLSPQELADY
MAV_0227|M.avium_104 DVVAHVISY--EELGAFGLLKRFAKGWVVRANQVGVDEFADLTPQQLLEF
TH_1248|M.thermoresistible__bu DVVAHVISY--EELGPFGLLKRFAKGYVVRANQVGVDEFGSLSPEQLLDF
MAB_4788c|M.abscessus_ATCC_199 DVVAHVLYDG-TPLLRYGSEVIRVRGSADRLNRLYLDRARGWSTEELLAA
Mflv_2303|M.gilvum_PYR-GCK NVAAHLTHSTMAPPR-MLWEAIRSGFRFDAMVDRLALADPRSP-AEISAH
Mvan_4343|M.vanbaalenii_PYR-1 NVAAHLTHSTIGMPR-MFFEAARSGFRFNAVVNRMAVSDDRSP-AQIAAN
MSMEG_6779|M.smegmatis_MC2_155 TVAAHLVSDFLDGFRGFLVSGIRHGN-MDKGIDALARRRAQAPAAEIAET
*.**:
MMAR_0893|M.marinum_M FRGLQHATSAPPGPK-VSWLGEIVLHGADIRQPLGIP-HTYSPGALRQTI
MUL_0646|M.ulcerans_Agy99 FRGLQHATSAPPGPK-VSWLGEIVLHGADIRQPLGIP-HTYSPGALRQTI
Mb2062|M.bovis_AF2122/97 VGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP-RTIPAQRLDRVL
Rv2036|M.tuberculosis_H37Rv VGRHLQPRGLTAGFGGMIALVDGMIHHQDIRRPLGQP-RTIPAQRLDRVL
MAV_0227|M.avium_104 LREHLEPRGLTAGFGGMIALVDGTIHHQDIRRALGRP-RVVPPDRLQRVL
TH_1248|M.thermoresistible__bu LNRHLWPRGLTAGFGGMIALVDGTVHHQDIRRPLGRP-RTIAADRLLRVL
MAB_4788c|M.abscessus_ATCC_199 FEATIA-RSYSARIQPKLVLADLLIHQQDIRRPLNRL-RTVPEGTLRMVL
Mflv_2303|M.gilvum_PYR-GCK LRAAVGSRRHPPGTTAFEPLIDVLVHAQDICVPLGID-RPMPVDAAVAAA
Mvan_4343|M.vanbaalenii_PYR-1 LRAVVGSRRHPPGTTERDPLTDVLVHTQDICVPLGID-RPMPVDAAVAAA
MSMEG_6779|M.smegmatis_MC2_155 LRTRAEFRLSPPVTGPLAGLTDVLVHGADIRIPLGLAHRPDPANVAWVLD
. .. * : :* ** .*. : .
MMAR_0893|M.marinum_M DFYRGSNLLSGAKKRISGLELCATDDDWRHGQGERVEGPLLSLLLAMTGR
MUL_0646|M.ulcerans_Agy99 DFYRGSNLLSGAKKRISGLQLCATDDDWRHGQGERVEGPLLSLLLAMTGR
Mb2062|M.bovis_AF2122/97 RLMPKNPRLR-ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAGR
Rv2036|M.tuberculosis_H37Rv RLMPKNPRLR-ARPRIKGLRLRATDLDWTIGTGPEVTGPGEALLMAMAGR
MAV_0227|M.avium_104 SLVPGNPRLG-AGRRIRGLRLRATDIDWTHGDGPQVSGPGEALLMAMSGR
TH_1248|M.thermoresistible__bu RSVPGNPRLG-AGRRIRGLRLHATDIDWTHGEGPEVSGTGEALLMAMTGR
MAB_4788c|M.abscessus_ATCC_199 DNP--DPFIN-PKRRLKGLRWTATDIQWTDGTGPEVHGPGEAIVMAVGGR
Mflv_2303|M.gilvum_PYR-GCK ERVWEMGFPFRARTRLAGVRLVATDADFAVGAGREHAAPVRELLMVLTGR
Mvan_4343|M.vanbaalenii_PYR-1 ERVWNADFPFHARKRLAGTRLVATDADFTVGEGREVAAPISALLMLLTGR
MSMEG_6779|M.smegmatis_MC2_155 FLAGRTQFGFFPQRRLRGLALHDGDTGRTWGAGQEIRGPGVALMLAVCGR
. *: * * * * . .. ::: : **
MMAR_0893|M.marinum_M AAGCVDLTGPGAQLLRSRCSGT
MUL_0646|M.ulcerans_Agy99 AAGCVDLTGPGAQLLRSRCSGT
Mb2062|M.bovis_AF2122/97 PAAVSDLSGPGKPTLAGRLG--
Rv2036|M.tuberculosis_H37Rv PAAVSDLSGPGKPTLAGRLG--
MAV_0227|M.avium_104 PAALADLDGPGRATLAARLGQ-
TH_1248|M.thermoresistible__bu AAVVDELGGPGKPVLAGRLR--
MAB_4788c|M.abscessus_ATCC_199 PAALAQLDGPGVEILRTRLDGD
Mflv_2303|M.gilvum_PYR-GCK AAAVADAR--------------
Mvan_4343|M.vanbaalenii_PYR-1 E---------------------
MSMEG_6779|M.smegmatis_MC2_155 TVALDRLTGPGVTVLRSRLT--