For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PEAASADQPTTSDAPQSSGLRILLDGVTKRYGVRSTPAVDNVTLEIGAGEIVMLVGPSGCGKTTTMKVIN RLIEPTSGRIFIGDDDVTRRNPDELRRHIGYVVQGAGVFLHLTVGDNIGIVPRLLKWDKNRVAARIDELL DLVNLDPAQYRDRFPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDELLRLQEELHKT IVFVTHDFGEAVKLGDRIAILTTGSKVVQYDTPERVLAEPANDFVRGFVGAGATLMQLSLTRVRDIDLHE AVVAQAGGDPAEAVELAGSLDRAHAIVLDRQNRPLRWLPLEELAKPQALAQVTRDDDLECVNLASTLNDA LDEMLTSAHGVVVVTGRRNTYQGVIRVETIMEAIADIRGAANSEEPDT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0033 | proV_1 | - | 100% (399) | osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV_1 |
M. ulcerans Agy99 | MUL_3658 | cysA1 | 5e-49 | 39.88% (326) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. ulcerans Agy99 | MUL_2252 | - | 4e-44 | 39.59% (245) | sugar-transport ATP-binding protein ABC transporter |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3784c | proV | 3e-70 | 42.55% (369) | osmoprotectant (glycine betaine/carnitine/choline/L-proline) |
M. gilvum PYR-GCK | Mflv_3109 | - | 1e-120 | 58.24% (376) | glycine betaine/L-proline ABC transporter, ATPase subunit |
M. tuberculosis H37Rv | Rv3758c | proV | 3e-70 | 42.55% (369) | osmoprotectant (glycine betaine/carnitine/choline/L-proline) |
M. leprae Br4923 | MLBr_01424 | - | 7e-45 | 39.20% (250) | putative binding-protein-dependent transport protein |
M. abscessus ATCC 19977 | MAB_1226 | - | 1e-170 | 77.69% (381) | ABC transporter ATP-binding protein |
M. marinum M | MMAR_0034 | proV_1 | 0.0 | 98.50% (399) | osmoprotectant (glycine |
M. avium 104 | MAV_0318 | - | 4e-66 | 41.51% (371) | amino acid ABC transporter, ATP-binding protein |
M. smegmatis MC2 155 | MSMEG_2926 | - | 1e-167 | 76.53% (375) | glycine betaine/carnitine/choline transport ATP-binding protein |
M. thermoresistible (build 8) | TH_4520 | - | 1e-175 | 78.65% (384) | PUTATIVE osmoprotectant (glycine |
M. vanbaalenii PYR-1 | Mvan_5600 | - | 4e-71 | 43.35% (376) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3784c|M.bovis_AF2122/97 ---------------------MICFDDVSKVYAHG-ATAVDRLTLEVPNG Rv3758c|M.tuberculosis_H37Rv ---------------------MICFDDVSKVYAHG-ATAVDRLTLEVPNG MAV_0318|M.avium_104 ---------------------MIVFDNVSKVFADG-TAAVDRLSLTVPTG Mvan_5600|M.vanbaalenii_PYR-1 ---------------------MISFEHVTKRYPDG-TVAVDDLTLEVPEG MUL_0033|M.ulcerans_Agy99 MPEAASADQPTTSDAPQSSGLRILLDGVTKRYGVRSTPAVDNVTLEIGAG MMAR_0034|M.marinum_M MPEAASADQPTTSDAPQSSGLRILLDGVTKRYGVRSTPAVDNVTLEIGAG TH_4520|M.thermoresistible__bu ------VSEP-TSDLQSGGGARILLDGVTKRYDPKSPPAVDNITMEIPAG MAB_1226|M.abscessus_ATCC_1997 ---MSDVTEN----ATITGGARILLDGVTKLYDGKSTPAVDNVTMEIPAG MSMEG_2926|M.smegmatis_MC2_155 ---MSDPALSGDPVATQTSGVRILLDGVTKRYDAKGPAAVDDITIEFPAG Mflv_3109|M.gilvum_PYR-GCK ---MTEQAAP--------TGVRIELDHVSKVYPGAKQPAVDDVSLEIPAG MLBr_01424|M.leprae_Br4923 -------------------MASVTFEQATRQFPDTDRPALDRLDLDVDDG : :: .:: : *:* : : . * Mb3784c|M.bovis_AF2122/97 MLTVFVGPSGCGKTTALRMINRMVDPTSGTITVDGTDVSTVNAVKLRLGI Rv3758c|M.tuberculosis_H37Rv MLTVFVGPSGCGKTTALRMINRMVDPTSGTITVDGTDVSTVNAVKLRLGI MAV_0318|M.avium_104 KLTVFVGSSGSGKTTALRMINRMIEPTSGTISIDGVDVSTLDPVKLRLGI Mvan_5600|M.vanbaalenii_PYR-1 TLAVFVGPSGCGKTTSMRMINRMIEPTSGTLTVDGRDVTKVDAVKLRLGI MUL_0033|M.ulcerans_Agy99 EIVMLVGPSGCGKTTTMKVINRLIEPTSGRIFIGDDDVTRRNPDELRRHI MMAR_0034|M.marinum_M EIVMLVGPSGCGKTTTMKMINRLIEPTSGRIFIGDDDVTRRNPDELRRHI TH_4520|M.thermoresistible__bu EIVMLVGPSGCGKTTTMKMINRLIEPTSGRIFIGDDDVTERDADELRRHI MAB_1226|M.abscessus_ATCC_1997 ETVMFVGPSGCGKTTTMKMINRLIEPTSGRIFIGDEDVTDKNPDELRRHI MSMEG_2926|M.smegmatis_MC2_155 EIVMLVGPSGCGKTTTMKMINRLIEPTSGRILIGDDDVTHRDPDELRRHI Mflv_3109|M.gilvum_PYR-GCK EIVIFVGPSGCGKTTTMRMINRLSEPTSGRILIGDKDALSIKPTELRRSI MLBr_01424|M.leprae_Br4923 EFVVVVGPSGCGKTTSLRMVAGLETLDSGCIRIGDRDVTHVDPK--DRDV .:.**.**.****::::: : ** : :.. *. .. : Mb3784c|M.bovis_AF2122/97 GYVIQNAGLMPHQRVIDNVATVPVLKGQPRRAARKAGYEVLERVGLDP-K Rv3758c|M.tuberculosis_H37Rv GYVIQNAGLMPHQRVIDNVATVPVLKGQPRRAARKAGYEVLERVGLDP-K MAV_0318|M.avium_104 GYVIQHAGLMPHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDV-K Mvan_5600|M.vanbaalenii_PYR-1 GYVIQSAGLMPHLRVVDNVATVPVLRGESRRSARRSALGVLERVGLDP-K MUL_0033|M.ulcerans_Agy99 GYVVQGAGVFLHLTVGDNIGIVPRLLKWDKNRVAARIDELLDLVNLDPAQ MMAR_0034|M.marinum_M GYVVQGAGLFPHLTVGDNIGIVPRLLKWDKNRVAARIDELLDLVNLDPAQ TH_4520|M.thermoresistible__bu GYVIQGAGLFPHYTVAENIAIVPRLLKWDRKRIAARVDELLDLVSLDPDE MAB_1226|M.abscessus_ATCC_1997 GYVIQGAGLFPHFTVGDNIAIVPKLLNWDKQRIDERVDELLDLVNLDPAQ MSMEG_2926|M.smegmatis_MC2_155 GYVIQGAGLFPHYTVGENIAIVPRLLKWEKQRIAARVDELLDLVNLEPAQ Mflv_3109|M.gilvum_PYR-GCK GYAIQQAGLFPHMTIRQNVGLVPGLLGWDRKRIGDRVDELLDLVGLEPAQ MLBr_01424|M.leprae_Br4923 AMVFQNYALYPHMTVAQNLGFALKISKISKAEIHDRILVVAKLLDLQP-- . ..* .: * : :*:. . : : : . :.*: Mb3784c|M.bovis_AF2122/97 VATRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDPVVRHELQNE Rv3758c|M.tuberculosis_H37Rv VATRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDPVVRHELQNE MAV_0318|M.avium_104 LARRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDPVVRHDLQNE Mvan_5600|M.vanbaalenii_PYR-1 LADRYPAQLSGGQQQRVGVARALAADPPILLMDEPFSAVDPVVREDLQTE MUL_0033|M.ulcerans_Agy99 YRDRFPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDE MMAR_0034|M.marinum_M YRDRFPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDE TH_4520|M.thermoresistible__bu YRDRYPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDE MAB_1226|M.abscessus_ATCC_1997 YRNRYPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDE MSMEG_2926|M.smegmatis_MC2_155 YRDRYPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQHLQDE Mflv_3109|M.gilvum_PYR-GCK YAERYPRQLSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRSTLQDE MLBr_01424|M.leprae_Br4923 YLDRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRAQTRNQ * * :****::***.:.**:. * ::*****:. :*. * : : Mb3784c|M.bovis_AF2122/97 ILRLQAELHKTIVFVTHDIDEALKLADLVAVFAPGGALAQYDETARLLSS Rv3758c|M.tuberculosis_H37Rv ILRLQAELHKTIVFVTHDIDEALKLADLVAVFAPGGALAQYDETARLLSS MAV_0318|M.avium_104 ILRLQSELHKTIVFVTHDIDEALRLGERVAVFK-GGMLQQCDEPARLLSR Mvan_5600|M.vanbaalenii_PYR-1 ILRLQSELRKTIVFVTHDIDEAIKLGDKVAVFGRGGVLQQYDAPARLLSN MUL_0033|M.ulcerans_Agy99 LLRLQEELHKTIVFVTHDFGEAVKLGDRIAILTTGSKVVQYDTPERVLAE MMAR_0034|M.marinum_M LLRLQEELHKTIVFVTHDFGEAVKLGDRIAILTTGSKVVQYDTPERILAE TH_4520|M.thermoresistible__bu LLRLQDELRKTIVFVTHDFDEAVKLGDRIAILQQGSKVVQYDTPEEILTN MAB_1226|M.abscessus_ATCC_1997 LLRLQEELSKTIVFVTHDFDEAVKLGDRIAILREGSQIVQYDTPEVILAN MSMEG_2926|M.smegmatis_MC2_155 LLRLQDELHKTIVFVTHDFDEAVKVGDRIAILTEGSRIVQYDKPEEILAN Mflv_3109|M.gilvum_PYR-GCK LLRLQNELRKSIVFVTHDFGEAVKLGDRIAVLGQQSKVLQYDTPQNILAS MLBr_01424|M.leprae_Br4923 IAELQCQLGTTTVYVTHDQVEAMTMGDRVAVLCYG-VLQQFATPRELYHK : .** :* .: *:**** **: :.: :*:: : * . : Mb3784c|M.bovis_AF2122/97 PANDFVSKFIGLGRGYRWLQLFDAAGLPVRD--IEQVSVNGLSDARDRQV Rv3758c|M.tuberculosis_H37Rv PANDFVSKFIGLGRGYRWLQLFDAAGLPVRD--IEQVSVNGLSDARDRQV MAV_0318|M.avium_104 PANDFVSRFIGLGRGYRWLQLIDAAGLPVHD--VRRLFAENLSGA---DV Mvan_5600|M.vanbaalenii_PYR-1 PANDEVAEFVGADRGYRGLQFFHATGLPLHD--IRRVAEPEINAL---TL MUL_0033|M.ulcerans_Agy99 PANDFVRGFVGAGATLMQLSLTRVRDIDLHEAVVAQAGGDPAEAVELAGS MMAR_0034|M.marinum_M PANDFVRGFVGAGATLMQLSLTRVRDIDLHEAVVAQAGGDPAEAVELAGS TH_4520|M.thermoresistible__bu PADDFVKGFVGHGAALKQLTLTRVRDVDLHDAVTARAGGDPDEAIHAARA MAB_1226|M.abscessus_ATCC_1997 PANDFVRGFVGHGAALKQLTMTRVRDVELHEAAVAHVGDDPAQAIEAAES MSMEG_2926|M.smegmatis_MC2_155 PADDFVRGFVGHGAALKQLTLTRVRNVELHEAAVAHVGDDPADAIRTAQA Mflv_3109|M.gilvum_PYR-GCK PADDTVAGFVGSGASLQQLGLLRVKDVALEPRPSVHRGDSVEQARAVIGA MLBr_01424|M.leprae_Br4923 PENVFVAGFIGS-PGMNLVTLSIVDSSVLLGDWPIRIPREIASAASEVII * : * *:* : : . . : : . Mb3784c|M.bovis_AF2122/97 RDG-WVLVVDGAGAPLGWIDADGRRRHRGGAALSDAMTVGGSVFRPNGNL Rv3758c|M.tuberculosis_H37Rv RDG-WVLVVDGAGAPLGWIDADGRRRHRGGAALSDAMTVGGSVFRPNGNL MAV_0318|M.avium_104 FDG-WAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNL Mvan_5600|M.vanbaalenii_PYR-1 NPGDWVLVTRTDGTPYAWINAAGVELHRNGSSLYDSTIAGGSLFQPDGTL MUL_0033|M.ulcerans_Agy99 LDRAHAIVLDRQNRPLRWLPLE--ELAKPQALAQVTRDDDLECVNLASTL MMAR_0034|M.marinum_M LDREHAIVLDRQNRPLRWLPLE--ELAKPQALAQVTRDDDLECVNLASTL TH_4520|M.thermoresistible__bu ADREHVIVLDAQNRPMRWMSLA--ELARPGALIRVSRDENLECVTLASTL MAB_1226|M.abscessus_ATCC_1997 IDREHVIVLDSHERPLRWSSLD--ELRAPNALQRVSQDEDLEKVSLASTL MSMEG_2926|M.smegmatis_MC2_155 IDREHVIVLDQHDRPLRWLSLS--ELSDAHSLERVTRDENLEKVSTSSTL Mflv_3109|M.gilvum_PYR-GCK SDHDWAVVLDDRDRPVNWVRES--RLRHAGALADAV--EKLDVVSTYSTL MLBr_01424|M.leprae_Br4923 GVRPEHFELGSLG-----VEVEIDMVEELGADAYLYGRIAGASKVTDQLV . : Mb3784c|M.bovis_AF2122/97 SQALDAALSSPSGVGVAVDGGGKVIGGILAADVLAEFQKGKKAGGGAKPC Rv3758c|M.tuberculosis_H37Rv SQALDAALSSPSGVGVAVDGGGKVIGGILAADVLAEFQKGKKAGGGAKPC MAV_0318|M.avium_104 SQALDAALSSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR------ Mvan_5600|M.vanbaalenii_PYR-1 RLALDAALSSPAGLGVAVDGAGQVIGGVRADDVLAALDKQRAARQAEG-- MUL_0033|M.ulcerans_Agy99 NDALDEMLTSAHGVVVVTGRRNTYQGVIRVETIMEAIADIRGAANSEEPD MMAR_0034|M.marinum_M NDALDEMLTSSHGVVVVTGRRNTYQGVIRVETIMEAIADIRGAANSEEPD TH_4520|M.thermoresistible__bu TDALDDMLTSSHGVVVVTGRRNTYQGVIRLETIMDAIADARGTAGSQGAG MAB_1226|M.abscessus_ATCC_1997 TDALEDMLTSSHGVVVVTGRRNTYQGVIRVETIMDAMAEMRAAAQ----- MSMEG_2926|M.smegmatis_MC2_155 NDALDVMLTSSHGVVVVTGRRNAYQGVIRVETIMDAMPDMQTSPTGPVL- Mflv_3109|M.gilvum_PYR-GCK EDALEAILAEQHASAVVAGPNNRYEGVVTLDTLIDTITRLRAEAEASTGA MLBr_01424|M.leprae_Br4923 VARVDGRNPPAKGSRVRLYTEPGNVHFFGVDGHRIS-------------- :: . . * . Mb3784c|M.bovis_AF2122/97 TT-- Rv3758c|M.tuberculosis_H37Rv TT-- MAV_0318|M.avium_104 ---- Mvan_5600|M.vanbaalenii_PYR-1 ---- MUL_0033|M.ulcerans_Agy99 T--- MMAR_0034|M.marinum_M T--- TH_4520|M.thermoresistible__bu AP-- MAB_1226|M.abscessus_ATCC_1997 ---- MSMEG_2926|M.smegmatis_MC2_155 ---- Mflv_3109|M.gilvum_PYR-GCK GDPS MLBr_01424|M.leprae_Br4923 ----